ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX065547 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◣ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

BRSK2
KCNJ15
ZNF436
ZWINT
ZNF550
SMCO1
PI4K2B
OBSCN
BSDC1
APOC3
APOA1
CYB5R4
ZNF555
FGD3
MID2
C19orf18
AADACL4
ITGB3BP
EFCAB7
ZSCAN32
ZNF174
DEGS2
CCDC200
ZNHIT6
WDR33
SELENBP1
ZNF24
MRPL55
MAMDC2
SMYD3
INKA2
DDX20
AKR7A3
YPEL3
TBX6
IFNAR2
TTLL1
KAT6B
MAPRE2
PRKACB
CPLX1
TSPAN5
NXPE4
ZSCAN31
KRBA1
ZNF514
UBE2F
ZNF572
ZBTB26
RABGAP1
PDE11A
F2RL3
TMEM229B
ZNF3
ABLIM2
WDR74
STX5
LDHD
ST20-MTHFS
MTRNR2L8
ZNF134
FAM184A
IL22RA2
FAM209A
ZNF829
ZNF568
RRAGB
ANO9
PTDSS2
FRMPD4
ZFP30
ZNF433
ZNF878
SRPRB
SAMD14
SAMD4B
GMFG
GPR35
MAP3K4
PRSS38
TBC1D22A
RABGAP1L
UQCRC1
TMEM89
ZBTB8B
RBBP5
ZNF891
ZNF10
YWHAQ
MRPS33
MYOG
GLT6D1
TSKU
ZNF623
MKLN1
STC1
SUMO3
IER3IP1
MTF2
ZNF426
SF3A3
NOX5
THEM4
TARS2
EDF1
ZNF324B
ZNF132
NOTCH2NLC
NOTCH2
DUSP6
NKX1-1
PNMA3
MS4A10
GALNT1
EIF4A3
DUX4
DHRS2
ZNF792
DBNDD2
COL18A1
VPS13D
ZNF350
SLC30A7
EXTL2
OPRL1
RGS19
LKAAEAR1
TEAD2
DKKL1
NUF2
TMEM161A
ZNF772
ZNF32
ZSCAN18
TTI2
RPL12
LRSAM1
KRTAP5-2
KRTAP5-1
ZNFX1
NRARP
CANT1
C1QTNF1
SSBP1
NOTCH2NLB
NOTCH2NLA
PRDX6
PEX7
ZNF165
DISP1
PXDN
ZNF501
ZNF502
ATP5F1B
BPIFB3
ZBED9
SNX11
CBX1
ZNF440
ZNF491
ZNF416
MSH3
DHFR
MTRNR2L2
MSRA
TMEM14C
NTSR2
COL23A1
ZNF404
CDCA7
ARHGAP39
FAM193B
PRRT1B
ACTL8
ID2
MTR
ZNF594
ACP6
METTL7A
C2orf69
B3GNTL1
LCN15
LCN8
LCN6
C10orf143
TMEM109
TMEM132A
ACY3
CYP46A1
ZNF662
AURKAIP1
TEX50
SDR42E1
RPIA
PRRG2
NOSIP
GTPBP4
C2orf88
OR4K17
GRAMD4
ZNF117
CDK19
AMD1
NEMF
SLC1A7
RPS29
ZNF613
TLE7
ZNF577
ZNF30
SLC33A1
DNAJC25-GNG10
DNAJC25
HACD2
COX16
RERE
CALCRL
RBBP9
IL36B
IL36RN
ADCY10
RNF217
LBP
CAT
LMBR1
ZNF135
YY1AP1
DAP3
SAP130
LARP1
DNAJB12
LUC7L
FAM234A
ZNF470
MYO1H
ANP32D
MROH7
EPB41L2
TATDN2
RTP5
GLYATL1
UTP3
GBA
TBC1D19
LY6K
RNF187
CFAP298-TCP10L
CFAP298
CROT
CFHR4
CNGA1
CALD1
IGFALS
ZNF300
TAS2R39
SUCLG1
C4B_2
C4B
TNXB
FN3K
HLA-E
PLA2G4E
CARD6
RPL37
RCAN1
ATP5MC2
TLR2
ZNF222
TTC32
SCTR
ZNF20
ISY1-RAB43
ISY1
CRLF2
VARS2
GTF2H4
ZNF708
DCTN6
MBOAT4
ZSCAN30
JMJD1C
CD14
TESK2
MMACHC
GABRR2
GALNTL5
C1orf159
EFHD2
PAXBP1
TDP2
ACOT13
ELAVL2
PHGDH
CCL24
SNX20
ALG14
TMEM44
GPBP1
TRAPPC8
ELAC1
FDX1
RAB30
CEP85L
TMEM242
NARS2
PEX3
ADAT2
ZSCAN22
COX7A2
MED23
ZNF527
CYP4F22
WDR11
MRPL30
MITD1
ELFN2
FAM234B
ZMPSTE24
TMCO2
SLC45A4
FGL2
TYW3
CRYZ
DIO2
PDXK
NUDT14
PTPRN2
MINDY3
TEDC1
CRIP1
CRIP2
RHEB
C3orf14
FAM13B
YJU2
SEMA3D
GRPEL2
RXRA
UBE2D3
CISD2
ZBTB44
SUPT7L
SLC4A1AP
SAR1B
MMEL1
TMEM259
CNN2
ZNF614
TRMT11
ATF7IP2
GABPB2
MLLT11
PPP1R11
POLR1H
LIMS2
RNF39
RDH12
USP21
UFC1
ZNF454
SULT1C4
COA6
CLEC12A
SERPINA3
ZNF726
PCDH15
METTL8
DCAF17
APOBEC3B
TMPRSS12
FAM13A
SAMD7
TFPT
PRPF31
RBM33
LPIN1
GLIPR1L2
MLPH
MYLK
ENG
RNF125
TRMT5
SLC38A6
ATL1
DCP1A
KDM3A
TBL1X
CPT2
EXOC6
ZNF391
LRP5L
TMEM125
NUP107
TATDN3
NSL1
P2RX2
LRCOL1
MIPOL1
SPANXB1
SPATA33
MDM4
RSF1
AAMDC
REXO4
ADAMTS13
B3GALT2
B4GALNT2
TEFM
MNAT1
METTL25
CCDC59
FABP6
OR1F12
IFIT1
PPRC1
ZNF879
CNIH4
HEATR1
DPYSL2
PNMA2
CPPED1
VAX1
SLC28A2
TTC7B
NOS3
ZNF546
IQGAP1
SLC25A53
FAM199X
NECAB2
BRF2
TIGD2
ATG5
BORCS6
CDC5L
PKP3
RPS7
SNRPD3
GUCD1
ZBTB33
EIF3F
NPR1
ILF2
ZNF540
ZNF571
SNRPE
CTAG1B
CTAG1A
DMAP1
TACO1
GTPBP3
ANO8
CCDC120
RCAN2
CEP85
NME1
TRIP4
PCLAF
PDCD6IP
RPS13
ZNRF4
KRTAP10-2
KRTAP10-1
ZNF83
EIF2S1
ATP6V1D
MOB4
DUXB
NDUFB3
FAM126B
ZNF263
FAM120B
ZNF75D
DLL1
CDYL
TPK1
PSMD8
OSGEPL1
NEK7
PER3
RGS21
IRAG1
SYT1
LUC7L2
FMC1-LUC7L2
FMC1
ATF7IP
ATP5MF-PTCD1
ATP5MF
COX6A1
LOC102724265
IRF2BP2
UBR2
SNCG
MMRN2
SKP2
LMBRD2
ZNF561
PRSS16
FAM153B
DSTYK
MAN2A1
HECW2
SDCCAG8
CEP170
SAMD1
C19orf67
TTC26
NIPAL1
ANKRD35
FANCC
TMEM72
REEP3
SPAAR
HRCT1
GASK1A
LIMK1
PAFAH2
ZNF292
WDPCP
MDH1
AASDH
HDAC2
NDUFS7
CLTB
EIF2D
NOP16
HIGD2A
PCBP3
MARK1
SHISAL2B
GSTA4
NBPF1
ZNF841
SMAD1
ZNF461
CD209
RMND5A
ATE1
ITSN1
CRYZL1
OSGIN1
POLR3B
MAD1L1
IARS1
PBX3
ZSCAN29
TUBGCP4
NAT10
ARL4D
PDE1A
ARHGAP45
NME4
DECR2
ZNF556
PGAP6
CLEC18C
POLN
HAUS3
MRPS16
DNAJC9
CYCS
PARD3
IFI6
ZNF226
ARHGEF39
ATG4C
SIT1
CCDC107
RSU1
GCGR
SEC23B
VAV3
FRA10AC1
CCNI
LOC100129484
TNRC18
GPRC5C
TMEM41A
ACOX3
TRMT44
E2F2
ASH2L
VPS52
RPS18
B3GALT4
RPL5
AHCYL1
IL1RAP
PLCH1
ACTRT3
MYNN
HIGD2B
BBS4
CACNA1H
SELENOH
RAB18
SSTR5
HECTD4
DNM2
SLC2A7
GDNF
TOMM20
RHOT1
CD2
AFAP1
LTN1
CACNG1
B4GALNT4
HDAC8
H4C14
H3C15
H3C14
H2AC19
H2AC18
H4C15
RGS18
UBE2L3
RIMBP3C
RIMBP3B
CCDC33
GFM2
TMBIM6
SURF2
SURF1
RPL7A
MED22
PTGS1
TMEM107
GADD45A
SF3B5
LOC100421372
HSPA14
CDNF
SCMH1
SLC35A3
GYPC
BCAR3
IL21R
KLHL20
SYDE1
IL36A
SLC24A1
ZNF443
SLC43A2
DIP2B
NCOA7
MRPS23
PLK2
RUNDC3B
EDDM3A
TM2D1
CSTF2T
C19orf81
SLC35E2A
ZNF383
ZNF585B
ZNF585A
LMTK2
COMMD2
LSG1
TXLNB
PDP1
ZKSCAN7
MTERF4
CCNC
SGMS2
FCGR3A
ZNF347
TBC1D32
IFNAR1
PDP2
MAGEA11
DNAI3
SLAIN1
SGPP1
SNIP1
DNALI1
MACROD1
PPIL3
NIF3L1
KRTAP10-8
HLA-C
KRTAP10-9
TMEM79
SMG5
GORASP2
INTS5
GANAB
POM121
TM9SF3
RPL27
IFI35
PPIP5K2
AARS2
PPDPF
DCT
COL4A6
COL4A5
LRRC49
THAP10
ZNF627
TMCC3
PRIM2
HTRA2
DQX1
COMMD6
UCHL3
FOXO3B
LOC100289561
RBM45
RPS15
TFF1
TFF2
MTA2
DNM1L
TUT1
ZNF790
BCL2L13
PALM
SLITRK5
FBXO44
ATP6V1E1
FBXO2
IGFL3
FEM1C
PACSIN2
SCGB1C2
SCGB1C1
ODF3
ARID1A
DHTKD1
SULT2A1
CSTF1
AURKA
RIOK2
PARPBP
NUP37
ZNF679
CLIC3
TM9SF2
MAIP1
PIH1D2
NKAPD1
KCNMA1
GYG2
PLEKHA3
FKBP7
STAC2
YTHDC2
PLEKHM3
HACL1
BTD
KRR1
DHRS13
FLOT2
SLC39A6
ELP2
SCUBE3
TMEM101
TARS3
IRAK2
GTF2H2
C10orf88
AKT1S1
TBC1D17
SPAG9
VTA1
NMBR
SMG7
PSMD2
ECHDC1
KRTAP19-3
KRTAP19-2
KRTAP19-1
NT5C3A
SEM1
UTP25
ARF1
SLC6A18
DRG2
OPN1SW
USP45
TSTD3
UBOX5
FASTKD5
CCDC136
THOC5
MRPS18C
HELQ
HTR3A
TSPAN2
CEP120
RTL10
GNB1L
RGPD2
RGPD1
MAEA
SPRR2F
TCHH
NUDT15
ALKBH3
TPM4
MYH2
MLLT1
SRP9
MIS18BP1
PLA2G2E
RAB5IF
STK32C
SPDEF
TMEM275
TMEM30A
MMP8
ZNF143
DEK
CCDC150
SLC35B1
TTC3
LACRT
BAX
CHMP7
ZNF487
POLG
ARID3B
DEDD
RSPH3
ZBTB25
ZBTB1
SPATA5
NUDT6
CALCB
SNRPB
CCNB1IP1
PARP2
ACSBG2
MED18
SLC2A8
PIKFYVE
POU2F1
FKBP9
EFCAB10
HAX1
TIAM1
MYOM2
FZD8
C1orf167
DNAJB13
ZMYND11
DYRK4
CRNKL1
CFAP61
B3GALNT2
DDX58
BAAT
EAPP
SEC22B
EPRS1
HTR7
CASP7
LMLN
IQCG
NR1H3
ACP2
SNRPD1
WBP1
INO80B
TNPO3
TMA16
RPA2
GPC6
RALBP1
RBAK-RBAKDN
RBAK
ZNF610
KDM6B
PPP3CA
CALHM5
GSTM5
SMIM13
MAGOH
LRRC29
CCDC90B
VPS33A
BRAP
ACAD10
FEM1B
EIF1AD
CST6
BANF1
TAF4
POLDIP3
RAB33A
AIFM1
SLCO1A2
FAAH
SAMD4A
LCA5
TMEM205
CCDC159
RAB3D
RAG2
IFTAP
PLPPR2
KRTAP13-3
ADAM21
IFT88
MRPL1
CFAP20
CCDC114
CREM
ABCG1
TSSC4
EPHA3
SLC25A44
KHNYN
CBLN3
C1orf198
VSX2
RAB6D
ZNF791
ZNF490
GRAMD1B
ARHGAP24
ATP1A1
UGT1A10
ZNF302
TMEM128
DDX43
SCAND1
VPS13B
BAZ2A
MTO1
CGAS
SLC27A5
ZBTB45
DYNC2I1
CC2D2B
RPS14
NRL
DCAF11
CLEC18B
ZSWIM7
TTC19
ZNF736
SPATA13
ORC5
SMIM12
HSD17B11
GTF2B
RARRES1
PDGFD
MAST2
ACBD6
DCLRE1B
AP4B1
IRF9
ZWILCH
SNAPC5
RPL4
CBWD1
INPP4A
TSFM
EMILIN1
OST4
KHK
POMGNT1
S100A6
S100A5
S100A4
S100A3
EEF1AKMT3
LURAP1
RIMKLB
CYC1
GPAA1
EXOSC4
ZNF56
DDX41
DOK3
GMEB2
CEP350
PPIG
COQ8A
BAG3
BFSP2
ZZEF1
CYB5D2
SRSF11
LRRC40
ZNF57
PIP4P1
OSGEP
APEX1
INHBE
GLI1
CUL5
MZF1
THAP4
SNRNP35