ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7030917 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◣ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MAMDC2
DUX4
PI4K2B
LOC102724770
DGCR6
KCNJ15
FAM227B
DTWD1
PSMD6
KRBA1
CCDC200
BCAS4
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SMCO1
KMT2A
ZNF550
ZWINT
WDR33
SGPP1
EIF2D
THEM4
MSH3
DHFR
MTRNR2L2
STX16
SMARCD2
BMP7
FRG2C
ARL4D
KDSR
MTRNR2L1
PFDN4
ZNF217
SRRM3
MUC3A
WDR74
STX5
SCTR
DCLRE1B
AP4B1
N4BP3
POLR2J3
MUC12
MKLN1
PDP1
SNX16
TMED9
B4GALT7
THUMPD1
IQSEC3
LRPAP1
FAM151B
NOX5
ZNF76
F2RL3
ATP1A1
DGKZ
NARS2
NCOA3
COMT
TXNRD2
WWOX
HTR5A
BTN3A3
CLIC3
SLC39A13
DUXB
NEDD9
TTLL12
ARHGEF1
CD79A
NFAT5
COL23A1
MTRNR2L8
CALM1
TBX2
ADAM21
FAM193B
AP4E1
EIF4A3
TTC7B
RBBP5
ACSF3
ATXN7L1
FZD1
PREX1
NSFL1C
GBA
HES1
BCL11B
RTEL1
GSTM1
RGS18
MRPS23
MKRN2OS
MKRN2
ZCCHC4
SEC13
CTNNB1
FRA10AC1
GNAL
COX6A1
TBC1D22A
RAB37
FRG2
CHD1L
PRKAB2
BRWD1
OPA1
DPY19L4
TIMELESS
SPATA33
PDE4DIP
DEGS2
ZNF341
RMND5B
LMTK2
C3orf14
MTRF1
CROT
USP32
APPBP2
SMG8
C2orf66
GTF3C3
PTGER2
INKA2
DDX20
FAM209A
DRAP1
C11orf68
LSS
CPA2
NOXA1
TRIM37
TRIM3
TIMM10B
KAT6A
DHRS13
FLOT2
ARFGEF2
DSTYK
PNPLA7
MRPL41
PUS7
RINT1
PRELID3A
MAPK11
OAZ3
GNAS
KANSL3
FER1L5
UPK3BL1
SPDYE2B
SPDYE2
GTPBP4
SSBP2
TRIB1
C18orf25
SDK1
ADSS1
PRRT1B
ZNF609
TTC6
FOXA1
HMGB1
USPL1
LY6L
MID2
PRRC2B
SERPINA3
ATP5F1B
SLC44A1
POLR2J
EVL
GSTM5
TPM1
ALG10B
MRPL1
TSKU
TARS2
SLC24A1
ZBTB8B
PEX3
ADAT2
SLC33A1
CRBN
B4GALNT3
DIO2
UCHL5
RO60
TRIP4
PCLAF
ERVW-1
RNFT1
ARPP19
WWP1
CUX1
HEATR6
ST20-MTHFS
CCDC130
PPP5D1
CALM3
SF3A3
WDR11
TEX14
RAD51C
PPM1D
MAD1L1
ANGEL1
NUDT1
MRM2
C7orf26
USP30
BPTF
IER3IP1
RGS21
ATR
SOX30
NFYB
ZMYND8
RBBP8NL
BCAS1
IL21R
OTUD7B
BRD3OS
MAIP1
VPS37D
KRTDAP
ART1
DRG2
MIS18BP1
LYSMD2
TMOD2
BANP
VARS2
GTF2H4
EIF3F
PPP6R1
METTL9
ATP6V1FNB
ATP6V1F
USP8
ZNF24
MRPS31
ZNF398
CLUL1
GNB2
FAM102B
DDX59
ITPK1
CFHR4
NEMF
SLC37A4
ZNF212
HECTD1
MYL12A
MYL12B
EPS15
SUMO3
SCCPDH
LUC7L2
FMC1-LUC7L2
FMC1
TBC1D19
GLRA1
MRPL40
HIRA
METTL7A
RBM48
PEX1
KMT2C
C1orf53
LHX9
ARHGEF12
ATAD2
NDUFAB1
SGCA
ATP8B1
MYO5B
MON2
FAM207A
IZUMO1
FUT1
FGF21
DCP1A
CADPS
ASNS
SNX27
FAM3C
IGFALS
HSPE1-MOB4
HSPE1
HSPD1
LSMEM1
GPRC5C
ADPGK
FOXK1
CYP27C1
TBX4
ARHGAP39
RPS20
NCBP3
PRKAG2
MUC1
CYP2C9
DMXL2
INO80C
ZNF425
PARD6B
CCL24
SNRPB2
USP3
CIZ1
NOL11
DNM1
MTRNR2L9
RBM28
RFX7
TEX9
PDAP1
BUD31
RBSN
CRYBG1
ZNF488
DVL3
TDRD5
RILP
TAF10
RRP8
ILK
IGSF5
NOP16
HIGD2A
ASB6
EXOC2
ANKRD36C
HOOK2
ZNF467
AMER3
NME1
NRBP2
CNOT6
KCNH6
ACTRT3
GNAI2
PPP1CC
SLC27A2
MTERF1
RBL1
TDRD9
ATP5MPL
ZC3H6
AP1G1
POR
TEX2
CA4
SSBP1
GFI1B
AHCYL2
TSC1
RCOR3
NUDT4B
NUDT4
ACAA2
GET3
PRSS16
IL17D
FRG1
LRRC37A3
PIAS2
USP15
VPS28
LMNB2
WDR73
NMB
SLC22A23
KATNAL2
RPS7
POLR3B
REXO4
ADAMTS13
EIF1B
MAPKAPK5
OSBPL1A
SRGAP2
ZNF708
ZNF433
FKBP9
TRIP11
CIB3
CMTR2
RHOT1
KIAA1549
MAP3K2
MVD
ZNF860
OSBPL10
SCAMP5
MZT2A
ZNF205
ZSCAN10
EPG5
BCAS3
KRT3
LEP
COX16
FAM133B
TMEM65
NUP107
CELF6
PTPRN2
GTF2H2
METTL25
CCDC59
UTP3
APOD
RAPGEF1
RASA4B
IMPACT
SBK1
COLEC11
AGK
KRR1
RRP15
PXYLP1
GTF2IRD2
VARS1
PPM1A
MCM7
AP4M1
MDM4
TDP2
ACOT13
ANKRD40
MYO5C
ENOSF1
PARP10
GRINA
PXDNL
HIPK1
SLC19A1
ZBTB7C
STEAP1
ITGB3BP
EFCAB7
CRP
AURKAIP1
EXOC6
PHRF1
RTP5
DNAJC11
CPLX2
LAMB2
XXYLT1
FAM234B
COPS4
GRM4
ZKSCAN2
ADAM22
LTBP2
ZNF165
OR1F12
KCTD18
GCLC
SYBU
ATXN2
NUF2
SAP130
SAMD7
TBC1D13
BMS1
NPAS4
ZNF594
MAN2C1
GPRIN2
ZNF282
TSEN34
NAPEPLD
TMC4
MBOAT7
DIPK1C
STX6
MEMO1
CRB1
ROM1
EML3
B3GAT3
DNLZ
CARD9
GPSM1
WASHC5
NSMCE2
UPK3BL2
PRDX2
RNASEH2A
LGI1
BMP4
ZSCAN32
ZNF174
MED23
PLA2G10
NPIPA3
NPIPA2
TECPR1
ACTR10
ZNF391
FAM228B
TP53I3
SF3B6
SKIL
SPPL2A
EIF3E
UIMC1
CPSF1
SLC39A4
PAK2
LRATD2
SMPD4
MZT2B
TNFAIP2
MFSD4A
COQ9
CIAPIN1
MYLK
UBQLN4
RAB25
LAMTOR2
KIAA0232
ZFAND4
TMEM121B
SCAND1
CYB561D1
TNFAIP8L2-SCNM1
TNFAIP8L2
BNIP1
TMOD4
SCNM1
LYSMD1
ATXN7L2
CDC25B
CENPB
GABPB1
ZNF746
SPEF1
PHLPP1
STX18
TACO1
WDR43
SERHL2
TPR
ODR4
AP3B2
NPIPB15
RGS6
NUDCD1
MOCS1
RGS9
CDK18
DIP2B
TMEM262
KDM3B
ISM1
ATAD2B
TRIP6
SRRT
ANKRD35
ANKS6
DLD
LRP12
MYH2
KIF22
IL36B
TDG
C12orf73
IL36RN
VWA8
ZG16
CEBPA
DBNDD1
GAS8
ARID3B
SMARCC2
ETFDH
C4orf46
SLC44A2
TMEM134
PALB2
DCTN5
ANKRD46
ATMIN
PRKCE
C17orf49
RNASEK
MYBPC3
BCL6B
GSAP
ST6GALNAC6
ZNF317
SNRPE
KLHL22
IRAK2
ZNF3
TMEM41A
SAMD4A
DDX1
COPS6
RANBP2
EDC4
SYT7
ACVR1
TSEN54
LLGL2
CASKIN2
NCAPH2
LMF2
RASEF
C1orf21
UNC5A
TNNT2
COLEC12
PRPF18
LPIN2
CLCC1
CTF1
BCL7C
NIBAN2
SIGLEC5
RNF166
CTU2
IGF1
NKX1-1
SNX17
EIF2B4
ZNF513
C18orf21
VPS72
PIP5K1A
PDS5A
TUBD1
RPS6KB1
BRINP3
KLC1
LMLN
IQCG
ZNF143
MTF2
INTS12
GSTCD
PNMA3
SYPL1
SRI
FAM83A
ZMYM2
NMT2
FECH
LRFN2
GRHL2
DIP2A
MRPL44
CDYL
ORAI3
SETD1A
DDX41
DOK3
GIGYF1
SLC25A15
RSF1
AAMDC
TMPRSS12
ADRM1
HUS1
CASC3
FOXP4
ZFP62
KLHL25
UMODL1
HDGFL3
RHOT2
RHBDL1
EP400
PDE8A
ACTR3
AMOTL1
SMAD7
C2CD4D
RORC
RNPS1
ZFPM1
TMEM68
TGS1
EPS8
TRUB2
COQ4
PRKAR2B
TBC1D30
CUEDC2
LAMTOR1
GPATCH1
POFUT1
PLAGL2
RIIAD1
CELF3
ANAPC15
TBC1D9B
RP9
INTS4
AMZ2
MYO5A
KCTD3
BCL2
FA2H
ETNK2
TXNRD1
CCDC174
TET3
ENTPD1
C4orf3
NOL7
GORASP2
FAM184A
NR1H3
ACP2
GCFC2
ELOVL2
PCBD2
EED
TPBGL
SSH1
PARD6A
ACD
CARMIL2
GREB1L
LDHD
PDE11A
ATL1
RBM45
BEST2
MFAP3L
HDGF
ELF2
DIAPH1
ZNF619
TGIF2-RAB5IF
TGIF2
TC2N
WDR24
JMJD8
STUB1
NOC3L
OGFOD3
HEXD
TRIM56
KIF21A
SLC48A1
RABL2A
SYNM
KCNB1
LACC1
CCDC122
WDR36
CCDC97
CLTB
SELENOT
CRH
NUCKS1
IVNS1ABP
ZNF276
VPS9D1
TESMIN
DDR1
PAXBP1
RPS29
PSMD3
ELAVL3
UBE2Q1
CHRNB2
WIZ
NEUROD4
TEX261
RAB12
CAPRIN2
NPEPL1
PTPN18
IL36A
CLK4
KCNIP2
TSN
RUFY2
WASL
GUSB
RNF115
POLR3C
ATXN7
MSI2
ARHGEF28
OBSCN
ZSCAN31
AARS2
STXBP5L
NPIPB9
KLF2
CGRRF1
SFTPC
LGI3
GTF2F2
SUSD6
SERPINB5
DNAJC25-GNG10
DNAJC25
EIF1AD
CST6
BANF1
DHX16
ZNF579
USP46
BCAP29
MET
CLDN3
ATG101
SMIM41
SFSWAP
TIMM9
KIAA0586
DGKH
SERTAD3
SERTAD1
ZNF687
CTNND2
EBAG9
BRIP1
NIFK
ZFP30
POLR3E
SNAP29
PI4KA
CDC73
HNRNPD
ZNF296
GEMIN7
SIKE1
GTPBP10
CSDE1
ZNF148
VMAC
NDUFA11
CARD6
RPL37
ZNF408
ARHGAP1
ZNF280D
TRAM2
RNF169
BHLHE40
KLHL12
JRK
RRP1B
HSF2BP
WASHC2A
TPGS2
TRIM33
TFRC
FAM178B
ATXN7L3
GSC
SCGB1C2
SCGB1C1
ODF3
PPIP5K2
U2SURP
XKR7
BCL3
CELF1
SEC14L2
RNF215
SLC26A4
THAP12
GVQW3
BTG2
NOM1
NRAS
RASA4
TRABD
TRIP13
BRD9
ANP32D
INTS5
GANAB
ACOT2
CLTC
FANCC
HEATR4
CERK
NPL
DCTPP1
ZNF641
NFKBIA
OTULIN
PRICKLE1
RCE1
CLK2
ADRA2B
CYP24A1
TOP3B
CYREN
CBLL1
TMA16
PCYT1A
CLK3
PLEKHG4
PTCD1
CPSF4
SPRR2F
TLK2
ITGB4
FGD3
C2orf88
PSMF1
MTR
METAP1
ATP8B2
AQP10
GOLGA3
ZNF354A
CARM1
DNPH1
PLXNB3
PPFIA4
ADCK1
MED12L
SMAD2
HARBI1
ATG13
CFAP53
GUCA2A
PRELID3B
MRPS18C
HELQ
CPPED1
WDR70
NUP155
NDFIP1
CYB5R1
ADIPOR1
ZNF23
USP42
UBTD2
KANK2
REPIN1
MRPS21
ARHGEF11
SEMA3C
THOC7
TPK1
MRPL3
ALDH7A1
RPS10-NUDT3
RPS10
SNX18
IQCH
AAGAB
PHAX
METTL5
UBR3
ELK4
CTNNA1
DOK7
PDE9A
MNX1
TMEM70
ELOC
MAPK1IP1L
CCDC71L
FITM2
S100P
TUT7
TDP1
EFCAB11
SELENOM
DPY19L1
HBEGF
HMGN1
ALDH3B2
ZMPSTE24
SPIDR
ERCC6L2
QSOX1
CEP135
MPHOSPH6
GTF2IRD2B
TTC23
LRRC28
SAMD4B
GMFG
ADARB1
LOC100287896
LIPT2
MICALL2