ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457587 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◣ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KRBA1
SMYD3
OBSCN
DUX4
LDHD
MKLN1
MTRNR2L1
SUMO3
BSDC1
PPIG
CCDC200
ZBTB26
RABGAP1
ZSCAN31
DCTN6
MBOAT4
BRSK2
TATDN2
ZWINT
ZNF3
COL18A1
BCR
IL36A
TSKU
UBE2F
KAT6B
PRAME
TEAD2
DKKL1
EXOC3
ARL4D
AADACL4
FRG2C
SARS2
MRPS12
SNAP29
PI4KA
GTPBP4
LUC7L2
FMC1-LUC7L2
FMC1
RBM33
ZNF436
PI4K2B
COX6A1
ZNF572
SAMD14
SAMD4B
GMFG
ART1
ATP1A1
PRRT1B
ADCY3
YTHDC2
MROH7
ATF7IP2
ZSCAN32
ZNF174
GUCA1B
ST20-MTHFS
ZNF514
TMEM41A
FKBP5
UBE2H
ZNF433
UQCRC1
TMEM89
FN3K
KCNJ15
PDIA4
YPEL3
TBX6
EIF4EBP1
CCDC130
ATP5F1B
PPIL2
C1orf167
FOXN1
SNX11
CBX1
ZNF562
CD2
ZNF550
TMEM43
CHCHD4
RSF1
AAMDC
NARS2
ELAC1
GJC3
SIGLEC14
PADI4
RBBP5
ST6GAL1
POM121L2
PRELID3B
SNIP1
DNALI1
LGALS12
PLAAT5
LZTR1
ZNF662
LOC102724770
DGCR6
CPT2
LMTK2
ZFP30
AURKAIP1
SERPIND1
FAM209A
ZNF134
CABP5
ZSCAN29
TUBGCP4
ZNF623
ENG
NUP214
ITGB3BP
EFCAB7
COMT
TXNRD2
ANGEL2
TRUB2
COQ4
MRPL20
ANKRD65
TOP3B
F2RL3
THUMPD1
LBP
YY1AP1
DAP3
DEGS2
POM121
GRAMD4
GFI1B
TSC1
FAAH
VARS2
GTF2H4
HTRA2
DQX1
IFI6
SAMD7
ZNF263
POLR2E
GPX4
SELENBP1
MRPL40
HIRA
NDUFS7
ZNF317
LUC7L
FAM234A
ZNF30
TRMT2A
RANBP1
CRKL
BTBD8
RBL1
JMJD1C
REEP3
MAPK1
CLK4
ZNF165
PRPH2
NBPF1
GPRC5C
CEP85
POLR2J3
CYC1
GPAA1
CHST3
EXOSC4
TRAF4
TLCD1
NEK8
ZNHIT6
DIP2B
SLC35E2A
GLRA1
MARCHF2
ZNF222
TTC32
SMIM12
CDK19
AMD1
FAM153B
ZNF117
ERV3-1-ZNF117
ERV3-1
METTL7A
STAU1
RCCD1
EIF3L
ANKRD54
TGIF1
ZNF761
C4B_2
C4B
TNXB
LONRF2
PCBP2
ZNF75D
ARHGAP39
BAX
ZNF501
ZNF502
PRKAR2B
RHOT1
SLC1A7
FEM1C
TXN2
MED23
LOC110384692
C4A
SEPTIN5
GP1BB
UBE2L3
ZNF408
ARHGAP1
TAF4
FOXK2
TRIM52
HLA-C
ICAM5
ZGLP1
PIH1D2
NKAPD1
TMEM42
FAM184A
APOBEC3B
GORASP2
RPL26L1
PIGQ
IL22RA2
IMMP2L
LLPH
PHF19
ZNF555
MYOG
AGPAT1
TNPO3
CPA2
LOC102724265
SPIDR
SMIM13
ZNF426
ZNF324B
ZNF132
VPS13D
ADCY10
HDHD5
UFD1
CDC45
SULT2A1
COPS4
NRSN2
WASHC2C
ZBTB8B
CCDC116
YDJC
SDF2L1
SSBP1
PPM1F
TMEM259
CNN2
TRANK1
PDXK
ZSCAN25
SFSWAP
KAT5
RNASEH2C
SF3A3
ADAR
STX16
C9orf16
GSC2
SNCG
MMRN2
IER3IP1
NME1
SGPP1
RTP5
RNF187
GYG2
MIR1-1HG
MAN2C1
C2orf88
EIF4A3
EIF1AD
CST6
BANF1
FZD1
ZNF594
PHRF1
PAFAH2
DNAJB12
MACROD1
GAGE2B
MAPRE2
RPS29
GNB2
THAP7
SUPT7L
SLC4A1AP
TTI2
OPN1SW
CCDC136
PPP5D1
CALM3
RIMBP3C
RIMBP3B
NDUFS6
MRPL36
GCFC2
TANGO2
ARVCF
RBM26
TAS1R1
NOL9
ZNF708
TPGS1
PDP1
SPACA3
CTAG1B
CTAG1A
TTC26
ZNF438
SNRPE
ZNF440
ZNF491
GLIS2
MRPL42
TTLL1
ZMPSTE24
TMCO2
UNC93B1
ALDH3B1
LINGO3
NOS3
ZNF394
PCP4L1
TMEM44
GRPEL2
RP9
ASCC2
TBC1D22A
METTL8
DCAF17
IGFALS
SEC14L2
RNF215
PRDX6
ZNF627
EIF2D
SUPV3L1
SLC28A2
TFPT
PRPF31
MOGAT3
ARTN
PACSIN1
SNX20
RELN
ZNF878
C6orf47
APOM
BAG6
CDCA7
IL21R
BCL7B
PTPA
CRAT
IFT88
NRARP
SPSB1
GDPD5
SPATA45
MRPS16
RXRA
C11orf96
SLC24A1
KRTAP10-7
GABPB2
HIP1
NUB1
SUB1
KRTAP10-6
MAD2L2
TRIM63
DRAXIN
WDR47
TMEM191C
PDZK1IP1
GTF3C4
DDX31
TMEM242
POLE4
SELENOH
PDCD6IP
CCNI
CSAD
ASIC3
ZNF740
CMC2
CENPN
SAMD1
C19orf67
PGBD2
GALNT1
TAS2R41
AADACL2
TRMT11
ZFAND6
PRPF3
LCN15
AHCYL2
RSAD2
C1orf158
SLC7A6
PER3
TMEM140
PLD3
C19orf47
ZNF792
ST3GAL5
SLC25A33
SH3GL1
CHAF1A
CLIC3
LCNL1
GGTLC2
MPZL1
MS4A6A
ZW10
CLDN25
RGL2
PFDN6
SETDB1
ZC3HC1
IQSEC1
KCTD9
CDCA2
INPP5B
ST3GAL4
YWHAQ
DSTYK
AURKB
PKMYT1
SLC4A1
DBNDD2
NT5C3A
HLA-E
YPEL1
POLG
TPR
ODR4
DGKD
CACNG1
ULK1
GOLGA6L10
SCGB1C2
SCGB1C1
RERE
ODF3
LARP1
OR1F12
CRBN
SYNJ2
GPR3
CD164L2
MED15
PRIM2
TDRD7
RHCE
ZCCHC7
FAM71E1
SLC27A4
ACTL8
PDE2A
JSRP1
OAZ1
RPS7
ACYP2
MRPS33
DCLRE1B
AP4B1
MRPL11
HSPBP1
BRSK1
APOC3
APOA1
DIP2A
ANKRD36C
COL1A1
CMIP
CCDC188
ZFYVE28
SYT3
ARHGEF4
SAP130
UTP3
AARS2
RPS15
ZSCAN30
MAP3K4
B4GALNT4
NME4
DECR2
SMU1
CDIPT
C6orf89
ZNF74
SEC24C
TMEM62
ZNF554
ZNF529
TSNAX
C7orf25
TMEM191B
NUF2
BTN3A3
REXO4
ADAMTS13
PLK3
TCTEX1D4
BTBD19
UBAP2L
C1orf43
NFYC
DNAJC14
IDUA
SLC26A1
SLC30A7
EXTL2
VTA1
NMBR
PPP6R1
HUS1
CDT1
PPARGC1B
EIF1B
APRT
DIRAS1
KLHL22
HFE
FGFRL1
MMGT1
WDR33
ZNFX1
PDE4DIP
ZNF614
LOC100289561
WDR43
CEP164
UCP3
PAXBP1
RPS26
E2F2
NUP205
OGDH
GSTA4
FRG1
NET1
TOR1A
ATG9B
TMEM216
ABCB8
TUBAL3
LMNB2
TMEM74B
PEX7
ZNF143
ZNF280A
GOSR2
RTL10
GNB1L
MAGOH
MTHFD2L
ZNF808
CREB3L3
PARK7
MAP1LC3B2
GJD3
EHD1
P2RX6
FAM220A
FAM193B
RGS21
DNAJB13
GK5
LMAN2
RGS14
THRA
FAM25E
FAM160B2
N4BP2L2
CCDC88A
QRICH1
TMEM128
NDUFA6
CNTRL
IREB2
C5
SPRING1
RNFT2
IL15RA
EPO
WDR74
STX5
LMLN
IQCG
ZNF441
SLC44A2
NRCAM
SLC25A24
CYP17A1
BAIAP2
FAM207A
TCP11L1
MADCAM1
KCNH1
ODF3L2
PLAU
ZSCAN21
KRTAP10-9
ATAD2
LTN1
RABIF
RNF216
ZNF33B
HTR3E
GSTM5
SAYSD1
ZNF282
SYS1
TMEM219
RBBP9
METTL25
CCDC59
KDM3A
CYB561D1
ATXN7L2
RBM28
PARP16
RIF1
CAPN11
PRKCSH
CCDC151
NBEAL2
CCDC12
INHBE
GLI1
TMEM240
TLR2
NEMF
TMEM222
SUGCT
MPLKIP
DYNC2I1
HNRNPH1
TRAF3IP3
MST1
PPP6R3
IL4I1
ZNF598
CD53
CWC22
TMEM229B
TAS2R39
USP48
DHX8
HSPG2
VMAC
NDUFA11
OR2W3
GPR182
PLEKHA6
SMARCD2
TMPRSS12
INO80C
WBP1
INO80B
SCAMP2
COPS6
ZBTB6
RC3H2
RPS10-NUDT3
RPS10
VAC14
GAGE2A
GBA
DCAF10
KLHL20
SLC25A23
CRB3
CCDC71L
DHX40
BANP
SLC44A1
NECAP2
ZNF585A
RHD
DISP3
ACOX3
TRMT44
BMS1
TNFRSF1B
MTR
THOC3
DPH7
KLF2
SMARCC1
SRP19
MAP2K1
NR2C2AP
NCAN
TM9SF1
IPO4
ZNF300
TLE7
WWOX
NPIPB9
PFDN5
MYG1
ERMN
TCAIM
HIC2
SMG8
EFHD2
ZNF385A
MRPS15
CEP192
VPS52
RPS18
B3GALT4
MARCHF7
PLIN3
CNPY3
DDX43
SH2D3A
CARD6
RPL37
TMEM101
CLEC18C
NEU1
DHX16
IBA57
PRKCI
DGCR8
PSMC3
SNAP47
TMCC3
MRPS18C
HELQ
TPM1
ZSCAN22
UFSP2
C4orf47
ZNF268
GUSB
CHMP4B
TUBB1
HAUS5
TRIP11
LY6L
RAX2
MATK
TTC38
PKDREJ
ZNF212
AASDH
BRPF1
GIMAP8
RNF146
DBF4B
CAMK2G
PKD1
DTX4
VARS1
HERPUD2
VPS13B
GRM4
TRIM5
TRIM22
KIF15
KIAA1143
POC1B-GALNT4
POC1B
GALNT4
KLHL18
KIF9
PHF12
AGBL3
DYNC2I2
CCNL2
KRTCAP3
DMAP1
RBIS
PPP1R8
SPATC1L
EEF2K
LEMD2
ANKRD13D
SLC6A9
FAM20B
ZFP36
SSH3
PLEKHG2
H6PD
FNDC3A
THEM4
EIF3F
GTF2H5
NSUN4
USP21
TMBIM1
IPO13
PPOX
NUP210L
SPTAN1
SEC61A2
SPACA9
AK8
SCAMP4
ADAT3
RAB3GAP2
ADAM8
TSC2
NTHL1
AXDND1
CRTC1
ZNF714
YJU2
FAM228B
TP53I3
SF3B6
ZNF398
PDRG1
CASS4
ZNF425
DDX27
HTR4
RBM48
PEX1
N6AMT1
RRP9
PARP3
CACTIN
ZNF649
IRAK2
MRPL55
SEC22B
ZNF391
CDK5RAP1
FAM180B
NDUFS3
KBTBD4
KIF22
PRPSAP1
TDG
C12orf73
ZG16
VWA7
AK2
ZDHHC12
TFEB
ZNF561
SACM1L
DTWD2
TSSC4
OVOL3
COMMD4
TBCB
POLR2I
UBTF
CRYAA2
CRYAA
SLC45A3
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
C19orf48
CENPP
NOL8
IP6K2
DLD
FRG2
PDE11A
FEM1B
WDR70
NUP155
RBM45
ZNF683
PRMT3
TUBA1C
PDE4A
CCDC124
TIMM50
RPL7L1
WDR4
STX4
CHMP4C
IL18BP
STRIP2
NBPF9
MRPL30
MITD1
TEKT2
ADPRS
HMGN4
PTPRF
PDCL3
DGCR6L
ATF7IP
CBWD5
CBWD3
CBWD6
EPB41
SH2B1
VPS33A
SCARB1
LEO1
ZNF558
HPR
POLR3B
TARBP2
NPFF
MAP3K12
PMS2
AIMP2
GLT6D1
TTC7B
TRIP4
PCLAF
DPY19L4
JMJD4
TMEM79
SMG5
EIF2AK2
INTS4
MEGF8
HDAC1
ZNF564
ARNT
HCN2
KRT16
CGB3
CGB1
CGB2
RPL27
IFI35
MRPL44
TESK2
MMACHC
HTR7
PMF1-BGLAP
PMF1
FUT10
CYP21A2
ZBTB40
TIPARP
KRR1
RAD54L
PSMB7
ZRANB2
POLR2J
BLOC1S5
TAF1C
MEF2A
ADAD2
TBL2
SNX15
RNPS1
SKP2
LMBRD2
GLO1
RRP15
RAP1GAP
ZNF358
MCOLN1
SLC25A16
TENT2
DGAT1
BBS1
VWDE
SCRT1
SYNC
PPIH
RBSN
CCDC83
TTC21B
C1orf74
SVBP
ERMAP
DDX50
CENPC
B3GALNT2
SEC11A