ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX12813813 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◣ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MAMDC2
LOC102724770
DGCR6
FRG2C
CCDC200
ARL4D
FRG2
SNX16
WDR74
STX5
PI4K2B
DUX4
MUC3A
KRBA1
COL23A1
PCNP
SMCO1
KCNJ15
RNF169
ABLIM1
THEM4
ZWINT
MCCD1
TMEM248
MTRNR2L1
ART1
RPL10L
EIF4A3
FAM209A
RTEL1
LRPAP1
UBB
LMTK2
GAPDH
NARS2
SERPINA3
WDR33
SGPP1
OBSCN
COX6A1
DSE
TSPYL4
THUMPD1
EXOC6
TTC7B
TBC1D22A
MKLN1
DMXL2
ADAM21
DIO2
H2AZ1
DNAJB14
OSGIN1
CYBRD1
RPS14
GSTM5
SCCPDH
EIF2AK2
TUBA1B
HES1
IL21R
ATP5F1B
PRDX6
PPP2R5A
TMEM242
MON2
CYP2C9
KMT2A
PTGER2
RPS27A
CLHC1
TPTEP2-CSNK1E
PRRT1B
C3orf14
IL36A
RMND5A
RPL30
RPL26
KRBA2
CROT
SAMD7
FAM193B
PHRF1
ST20-MTHFS
GSTM1
TMPRSS12
LEP
ACAA2
TTLL12
PSMD6
SLC13A2
LDHD
ZNF527
LMLN
IQCG
IGFALS
ANP32D
CD209
NOX5
ST6GALNAC6
PDP1
TSEN34
TMC4
MBOAT7
BTN3A3
MSH3
DHFR
MTRNR2L2
SCTR
MYL6
MYL6B
DEGS2
PNPLA7
MRPL41
TATDN2
ZNF433
RGS21
ZFP37
BRSK2
TUBA1C
DVL3
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PARL
GAS2L3
COMT
TXNRD2
RUNDC3B
UBE2F
B4GALNT4
ZNF24
AFAP1
RBBP9
SEC23B
USP17L21
USP17L20
USP17L12
USP17L22
YBEY
MCM3AP
SERHL2
FAM227B
DTWD1
MTRF1
SMYD3
CIPC
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
CEP41
ARHGAP39
FAM184A
DIP2B
SRPRB
HEATR6
ZNF550
PDCD7
MUC12
MAPK11
PRSS16
GTPBP4
EDF1
SKP2
LMBRD2
MINDY3
TTC6
CYP4F8
FOXA1
RXRA
ACP6
STMN3
MANEA
SPATA33
PNMA3
NKX1-1
CPA2
PUS7
RINT1
NKIRAS1
RPL15
VPS13D
MID2
TUBA1A
C2orf66
FAM151B
ZNF641
MYO5A
EIF3L
ANKRD54
TTC28
F2RL3
KRTAP10-9
TNS2
FGF18
CLIC3
ZBTB8B
SYPL1
ZNF217
AFG3L2
PDE11A
GLRA1
FAM234B
RPIA
GNMT
BMP7
SAP130
BANP
HLA-C
EIF4EBP1
PIP
ACTRT3
MYNN
ZNF572
PXDNL
SCGB1C2
SCGB1C1
ODF3
ARFGEF2
MLYCD
SLC28A2
HTR7
METTL7A
EFCAB10
ZNF341
PLCG1
PPP2R3A
AMZ2
ACOX3
TRMT44
NPR3
ZFP1
KRT25
KRT26
CCDC130
NUDT4B
NUDT4
IRAK2
FZD1
TRIM37
PPP1R9A
C2orf88
EIF5A2
TIMELESS
PPP1R3E
BCL2L2-PABPN1
BCL2L2
FKBP9
BDH1
UNK
H3-3B
LONRF2
GRM4
KAT6B
STX16
XXYLT1
TSKU
SATB1
PARP15
SFTA2
RGS18
ZNF317
APOL4
TARS3
TBC1D30
PRR14
FBRS
CERS2
ANXA9
EPS8
RSU1
PFDN4
HAUS5
DNAJB12
ZNF282
LAMB2
ZNF324B
ZNF132
DUXB
PPM1D
CLDN18
CRB1
SLC36A2
TMEM229B
BAAT
ZSCAN32
ZNF174
PRELID3B
OR2AP1
GRIFIN
DPY19L4
MAD1L1
NUDT1
MRM2
CEBPB
ELAC1
C2orf69
SLC7A5
ZSCAN31
TMCC1
EFCAB13
CFAP43
CUL1
PLD4
SLC25A48
LRP12
MAPK6
CCL24
CALCB
IQSEC3
FANCC
HSPA8
MUC1
FLT3LG
RPL13A
ADCY3
ATXN7
MAN1A2
ACAP2
TNFRSF11A
CRY1
SYCP2
FAM217B
PPP1R3D
OR6B1
PAXIP1
SERPINB5
GLT6D1
IER3IP1
CRP
GPR35
CLK4
LPIN2
THOC3
DOCK7
ELOVL2
CADPS
LRRC42
PRSS38
HYAL1
NAA80
HYAL3
NAT8
ZNHIT6
B4GALNT3
TMEM65
RANBP17
DIP2A
NEDD9
DSTYK
RTP5
ITPK1
LSS
CD14
IL36B
IL36RN
TCTN3
SAYSD1
TMEM250
PARD6B
HRNR
SLC27A5
PIAS1
STPG4
MIS18BP1
ATXN7L1
RDH12
SOX30
ZMYND8
TMEM125
DNAJB1
TARM1
RBPJ
NRARP
SYNM
SAMD4A
ACSF3
PDE8A
PTPA
CRAT
NR2C2AP
NCAN
C20orf204
CACNG1
GMFB
PLEKHA1
LYSMD2
C10orf143
SLC26A4
BPIFB3
CEP72
ISY1-RAB43
ISY1
SHOX2
RSRC1
FBXL5
VTCN1
FBXL18
CTAG1B
CTAG1A
EFHD2
ANKRD36C
CAPN7
DTD2
BCAP29
BAIAP2L1
SNCG
MMRN2
CEACAM21
BFSP1
BCAS2
ZNF394
TPM1
PARP16
NUDT14
PAG1
TBX2
TMEM41A
CAMK2D
RASL11B
FAM91A1
SHISAL2B
CYP17A1
CAPN5
BCAR1
TLE7
ACOT2
HEATR4
CPLX2
IMPA2
GABPB1
ZNF777
SVOPL
TRIM33
A4GALT
POU2F1
BAG3
SNIP1
DNALI1
SESN1
CEP57L1
CCDC149
WIZ
CCDC74A
ARL2
GIMAP4
EN1
FN3K
PLAAT1
PLEKHF2
CSF1
NACC2
METTL8
DCAF17
HOMER1
MYBPC3
ELK4
SOGA1
KRTDAP
SFT2D3
DNASE2
KLF1
GCDH
TUBD1
RPS6KB1
PCDHB9
PCDHB10
PCDHB11
RNGTT
MROH7
PSEN1
CPPED1
NOXO1
SERBP1
SYNGR3
GFER
TERF1
VSX2
VPS13B
SRI
TTC30A
SKOR2
TADA3
ARPC4-TTLL3
ARPC4
P3H4
FKBP10
INPP5A
ITGB1BP1
CPSF3
ATP1A1
BCAS4
GTF2IRD2
GTF2IRD2B
CST8
DGKE
C17orf67
PRKAR2B
RASA4B
MYL12A
MYL12B
USP32
PREX1
PRKCZ
HFE
ZFPM1
TM9SF3
ADORA2B
NIN
FAM110B
TTC39C
SH3YL1
ACP1
IMMP2L
TMX4
DBNDD2
YPEL3
TBX6
ZNF436
ZNFX1
AADACL4
CYB5R4
CPT2
BSDC1
ZNF708
DCTN6
UQCRC1
MBOAT4
TMEM89
MTRNR2L8
ZNF562
SLC30A7
EXTL2
ITGB3BP
EFCAB7
DUSP6
PER3
TEAD2
DKKL1
ZSCAN30
FGD3
GBA
NT5C3A
RHOT1
FAM153B
ZNF3
TTLL1
GORASP2
CNGA1
CDCA7
ZNF134
SARS2
MRPS12
HACD2
ZNF792
SUMO3
COQ9
CIAPIN1
ZNF555
PEX7
ZBTB26
RABGAP1
GRAMD4
PADI4
SNX11
CBX1
BTBD8
PPIG
FEM1C
MAP3K4
NUF2
APOC3
APOA1
COL18A1
LGALS12
BCAR3
CD2
PAXBP1
PLAAT5
RBBP5
APOBEC3B
ZNF143
MTF2
ZNF426
ZNF30
RPS7
TLR2
SNX20
BCR
FGL2
ZNF514
ZNF117
SSBP1
TSPAN5
ZNF761
PDE4DIP
DMAP1
IFI6
AURKAIP1
OR4K17
MRPS16
LUC7L2
FMC1-LUC7L2
FMC1
RPL39L
SAMD4B
GMFG
GPRC5C
TEDC1
CRIP1
ACY3
SF3A3
NEMF
TACC1
PUM1
CRIP2
ACYP2
FAAH
RFC1
ZNF613
LBP
MED23
MYH2
DTX2
NDUFS7
UBE2D3
C4B_2
C4B
CEP85
CISD2
ZNF627
IL22RA2
INKA2
DDX20
IQGAP1
ZNF165
ADCY10
TYW3
CRYZ
PTPRN2
NME1
SDR42E1
ST3GAL5
CHD1L
SLC1A7
COX16
MAPRE2
TMEM70
RPS29
DCP1A
PEX3
ADAT2
MDM4
RPL27
RAB37
SEM1
GPD1L
AKR7A3
DNAJC25-GNG10
DNAJC25
EIF2D
RABGAP1L
INTS12
GSTCD
LMLN2
LOC110384692
C4A
YY1AP1
DAP3
YWHAQ
ZNF83
ZNF623
YJU2
GALNT1
JMJD1C
IFI35
ZMPSTE24
FRA10AC1
ELOC
PLEC
DCAF10
RBM33
IFT88
TMEM262
SELENBP1
BAX
MRPL44
NUDT15
FASTKD1
SNAP47
GDPGP1
CIB1
POLE4
MRPS33
LCN15
SULT1C3
ZNF577
PRAMEF1
HMGB1
NDUFB3
FAM126B
EAPP
NOS3
POLD1
TTC32
CYC1
FDX1
POLR2J3
ZBTB44
SAMD14
NPAS4
ZNF662
NARF
CALD1
USPL1
ZNF594
GJC3
MRPL55
TTC30B
GPAA1
BRF2
C19orf18
HERPUD2
TDP2
ACOT13
STX18
CHST3
TMEM43
CHCHD4
TBC1D19
NOTCH2
TRIP4
PCLAF
TMCO2
LCN8
ZFP30
GTF2H2
SELENOH
TCF25
PROKR2
SLC41A3
CFHR4
TOP3B
SLC24A1
CARD6
ZNF440
ZNF501
ENG
ZNF226
TMEM14C
ZNF491
MYOG
MOB3A
IZUMO4
RPL37
CHMP7
TNXB
DRG2
PRKACB
SPATA13
SMARCD2
TMEM106C
NXPE4
RERE
KIF5C
RSF1
AAMDC
ZNF443
FRMPD4
TOR1AIP2
TOR1AIP1
COMMD2
PIK3R1
EXOC3
COQ8A
ZNF487
ADI1
SLC33A1
ABLIM2
FEM1B
TM9SF1
PAFAH2
NSFL1C
EXOSC4
C1orf159
TMEM62
CYBC1
TARS2
LIPA
PSMD8
MRPS31
ARHGAP45
ZNF614
GTDC1
ZNF561
POLR3B
PPIP5K2
FAIM
FKBP5
TFPT
PRPF31
TTC26
CXCR2
ACER2
ZNF878
NME4
DECR2
GSTA4
METTL25
CCDC59
TRIP11
ZNF408
ARHGAP1
ALG10B
PPP1R11
SPACA3
PCYOX1
GALK2
LCN6
YTHDC2
TATDN3
NSL1
SEC22B
KDM3A
CLDN16
ANGEL2
REEP3
UTP3
CYP4F22
TAS2R39
SEMA3D
ACBD6
ZSCAN29
TUBGCP4
SLC44A1
SLC25A51
ZKSCAN3
CAT
GTF3C3
GCNT3
FRG1
IPO4
BAIAP2
VARS2
GTF2H4
THAP11
LOC100289561
TIGD2
ZNF556
RAD54L2
PAIP2B
EIF3F
MLLT1
INTS5
GANAB
VTA1
NMBR
ZER1
TMEM68
TGS1
GOLM2
IFNAR2
PLA2G1B
ZNF391
ZNF280A
ZKSCAN7
CATIP
VPS37C
ATF7IP2
NRBP2
TMCC3
SMG8
AUH
NUTF2
CENPT
TM9SF2
LSG1
GTF2H2C_2
GTF2H2C
SUPT7L
SLC4A1AP
REXO4
ADAMTS13
INO80C
WDR36
TBC1D13
RUVBL1
SLC2A7
PRIM1
TESK2
MMACHC
KIAA1549
POM121
NBPF1
ACTL8
ZNF32
FGFBP3
MRPL40
HIRA
FBXO31
GLO1
HLA-E
HTR5A
ZNF222
BORCS7
RPGRIP1L
FTO
COLEC11
POLR1H
RPL11
CLPP
STAT3
ITGA4
DCLRE1B
AP4B1
TMEM44
CAMK1D
EIF1AD
CST6
BANF1
LRIG2
STAT1
MTERF4
MACC1
ZNF285
RTTN
ZNF350
SAR1B
PARK7
DRAP1
C11orf68
FAM207A
PPP6R1
TEX46
KDM1A
HSD17B6
MTERF1
TEFM
PDCD2
PLA2G4E
MSRA
BMS1
RILP
ZNF841
CDK5RAP1
TACO1
GINS1
RNF187
L2HGDH
DMAC2L
ZNF829
ZNF568
CCNT1
TTC13
ARV1
JMJD4
KRTAP10-7
SRRM3
SLC9A1
SCMH1
ANK3
MAP3K2
EPB41L2
SNX17
EIF2B4
ZNF891
ZNF10
SCAND1
ZC3HAV1
PRIM2
PSMF1
ESR2
ETFBKMT
TXNL4B
DHX38
ATR
USP30
ORC5
ZBTB45
GBP4
THOC5
PDE6D
COPS7B
ORC4
MBD5
ZNF582
NBN
POLR3E
NPR1
ILF2
NCKAP1L
CCSER2
REN
DEK
PRRC2B