ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX065554 | U2OS
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◣ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

BRSK2
ZNF436
MAPRE2
ITGB3BP
EFCAB7
CCDC200
KCNJ15
AADACL4
PI4K2B
MTRNR2L8
PAQR8
BSDC1
MAMDC2
PRKACB
COL4A6
COL4A5
SUPT7L
SLC4A1AP
C19orf18
FGD3
F2RL3
IRF6
ZNF408
ARHGAP1
WDR74
STX5
GALNT1
GABPB2
NBPF1
RBM33
KDM3A
ATF7IP
IKZF3
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MRPL55
OBSCN
SCTR
PAXBP1
SLC2A8
YPEL3
TBX6
KRBA1
CYB5R4
ABR
RPS26
TMEM79
SMG5
TARS2
CDIPT
CRLF2
LGALS3BP
UBB
RGPD2
RGPD1
DHRS2
MSH3
DHFR
MTRNR2L2
NOX5
CANT1
C1QTNF1
ZNF426
THG1L
ARID1A
ZNF540
ZNF571
LCA5
SRPRB
PRPSAP1
RPH3AL
HDAC8
ZNF134
DEFA1B
DEFA1
WEE1
SMYD3
PIH1D2
NKAPD1
SAMD14
CCNI
L2HGDH
DMAC2L
NDUFB3
FAM126B
MAP3K14
CALCRL
CCL20
CELF1
MT1HL1
AHCYL1
RDH12
DUX4
RPL27
IFI35
LRIG2
PLA2G2A
RRAGB
PLK3
TCTEX1D4
BTBD19
KAZN
RHOQ
ATP6V1E2
DYNC1H1
CELSR1
PPP6R1
PDE4DIP
RPIA
CLPTM1
APOC2
FCGR1A
ST20-MTHFS
AURKAIP1
ZNF594
GDNF
VSIG1
PPIL3
NIF3L1
ZSCAN32
ZNF174
GTPBP3
ANO8
ARTN
TFPT
PRPF31
SMTN
CELA2A
ZNF806
ZNF514
RPS24
POLR3A
KSR1
ZDHHC6
VTI1A
RBBP5
SAMD7
RCAN1
NOL12
SSBP1
ZNF577
INTS5
GANAB
SLC9A1
ANKRD35
SERPIND1
GTPBP4
APOC3
APOA1
SLC39A6
ELP2
KDM5C
MAST2
ZBTB26
RABGAP1
UBE3B
KCTD10
SLC5A1
ZNF555
ABRACL
TNFRSF1B
EIF2S1
ATP6V1D
RAG2
IFTAP
PDE12
TLE4
GNB1
IL17F
NEK2
CDK12
MED1
EPHA2
PM20D2
PRSS21
NARS2
EVPL
ISY1-RAB43
ISY1
GJC1
MRPS33
VARS2
GTF2H4
PRSS41
ZNF302
DUSP6
HAX1
LY6K
RAD51AP1
C12orf4
ZNF383
CREM
ZNF585B
DNAJC16
CASP9
OPN1MW
OPN1MW3
OPN1MW2
WDR83OS
WDR83
MAN2B1
GBA
ARHGAP39
TBL1X
NKX1-1
NOTCH2
FGFBP3
ELFN2
TPM3
AKIRIN1
C1orf189
SLFN12
SF3A3
MAGEA11
ZWINT
MTF2
BCL10
ZNF891
ZNF10
COX7A2
ARHGEF2
AAAS
KANK4
UBAC1
IL22RA2
B4GALT3
SIRT3
PSMD13
WDR33
ACY3
THEM4
SEC22B
TMEM125
TESK2
MMACHC
AGFG1
FAAP20
CD2BP2
TSKU
MID2
YWHAQ
AP1G1
IGFL4
SLC33A1
ARID3B
GPC6
BAIAP2
AEBP2
LACTBL1
INKA2
DDX20
ZMPSTE24
TMCO2
PISD
ZNHIT6
EIF3F
TTC26
LRP6
COIL
PPRC1
TRIM5
TRIM22
LIMK1
EPRS1
DMP1
ERICH4
DMAC2
ZW10
CLDN25
SNIP1
DNALI1
ZNF750
SELENOH
STC1
C3AR1
PCDH9
DYNLRB2
STX1A
NPR1
ILF2
PACSIN2
HEMK1
C3orf18
RFFL
CITED4
PLEKHG1
TMEM242
KAT6B
COX16
SGPP1
SCMH1
CASP10
SMAD5
RMND1
ARMT1
SNRPD1
KCNH4
NID1
HCRT
PROC
GPR35
IFI6
PARP15
PARP9
DTX3L
TNPO3
DDX42
CCDC47
PRRT1B
NEMF
CHMP7
CD14
ABLIM1
GLIPR1L2
ZNF572
RABGAP1L
ZNF226
CYB561D1
ATXN7L2
TPK1
SOD2
COPS4
PHC2
DNAAF1
HSDL1
MRPL54
APBA3
RHOC
ARMCX5-GPRASP2
ARMCX5
NME1
RPA2
TTC39C
AKR1A1
RERE
STAT3
RNF125
LMNA
CEP120
STK40
ZNF790
FAM209A
ID2
CNGA1
MRPL1
NIPAL1
RAB33A
AIFM1
MICALL1
PTP4A1
LSG1
ITPR3
TIMP3
ZBED9
DRD4
KRT10
CDHR5
SCT
DNAJB12
DND1
WDR55
USO1
TMEM72
C1orf174
SLCO1A2
ZNF793
FBXW10
TTLL2
AK2
TMEM127
CIAO1
PHF5A
ACO2
OPN4
COL18A1
COQ8A
HEATR1
INTS2
ZNF335
REXO4
ADAMTS13
NCOA7
MXI1
DYNC2I2
UQCRC2
YTHDF2
TIMM10
SMTNL1
EDF1
JMJD1C
EDDM3A
CEP162
SFRP2
LIMS1
MTR
CGGBP1
FNTB
C3orf38
PLEKHH2
ELL
EIF1AD
CST6
BANF1
MTBP
MRPL13
PLAU
KDM6B
PLAAT2
MIS18BP1
SLC25A53
FAM199X
RGPD6
DHRS3
C5AR1
TUFT1
PLK2
PEAK1
HMG20A
TMEM247
LIMS4
ASAP3
SH2D5
ZNF3
MTA2
TUT1
ZNF56
SRA1
SLC35A4
APBB3
NR1I2
APOL6
USP21
RBM25
UFC1
MED11
ZMYND15
CXCL16
GAPDH
IFNL2
CORT
BEST4
CCIN
CCDC130
TRUB2
COQ4
LY6L
SLC25A33
SHOC2
BBIP1
AGTPBP1
CCNC
CLASP2
RMI1
HNRNPK
ZNFX1
EIF4A3
CALCB
TBC1D19
ZBTB40
TXNRD1
TRMO
LIG3
MAP7D2
RNF207
RPL22
ARHGEF3
ZBTB33
SNX27
GPS2
EIF5A
SPATA12
TIMP4
NHLH1
SHISA3
MROH7
RPL12
LRSAM1
PSMB7
HKDC1
ZNF829
ZNF568
BIK
RPL11
CENPP
CTR9
NOL8
MIDEAS
NYX
KRT19
GLT6D1
TAF12
FRRS1
RSPH3
HEXB
RCN1
RHOD
NDUFS7
LMTK2
KCNMA1
PSAP
RBMS2
MKLN1
PTPRH
GPX1
CPN2
GPX8
ZNF24
SMG8
CCDC97
STN1
ZKSCAN2
SCYL3
APOLD1
ARL15
RCC2
CRTAM
CCKAR
ZNF331
LSM4
DUSP14
RFXANK
BORCS8-MEF2B
BORCS8
ZNF461
PRKCSH
CCDC151
ANKRD1
GTF3C5
TIMM9
KIAA0586
THAP12
GVQW3
CDH1
SPOCK2
BNIP5
CDC73
CHAD
TMEM107
ZNF221
PCNP
ENPP1
SUGP1
MAU2
ENSA
TNFRSF1A
LOC102723996
ICOSLG
SIN3B
GLRX2
KRT31
BORCS7
MNAT1
NUB1
CSTF2T
PRIMPOL
CASP3
TRMT11
CLN3
APOBR
DLX4
SMG9
FAM81B
SCGB1C2
SCGB1C1
UBE2L3
RIMBP3C
RIMBP3B
ZBTB38
TAGLN2
WSCD1
BFSP1
INPP5A
SLC19A1
SCARB1
RPL7L1
ZNF704
ISX
VGLL1
ZNF623
HEBP2
TRMT1
NACC1
PRKG1
ZFP37
RCAN2
ZNF251
MTMR11
LONRF3
LDHD
GORASP2
ZFP30
ZC3HAV1
POMGNT1
LURAP1
NFATC3
ZNHIT3
NME7
BLZF1
HAPLN2
USP9X
MTHFD1L
RPAIN
NUP88
MTRNR2L9
AASDH
PSMB11
DNAL4
PSMB5
ZNF566
TM2D1
SYAP1
CTPS2
XPNPEP3
ST13
DNAJB7
FRAT1
FRAT2
OR13H1
FAM184A
FEM1C
ZNF300
ZSCAN22
RPS3A
RFC4
AMHR2
LOC102724770
DGCR6
ZSCAN30
WDR11
CYP46A1
SIRT4
GYG2
SLITRK5
SLC7A11
ZSCAN23
SULT1C2
BNIP1
PSMD3
LUC7L
FAM234A
NUDT9
STAT6
ASIC3
UBQLN1
PGLS
GAL3ST2
PNMA3
TEX46
KDM1A
TEFM
NRSN2
SLC39A9
ERH
PXT1
KCTD20
NUDT5
CDC123
TFB1M
JUN
C6orf118
PTPRN2
FRA10AC1
NRARP
PPIP5K2
ATL1
CLCN3
IRF9
STBD1
FAM89A
C19orf25
TCIM
ENKUR
ADRA1A
ARL4D
TBC1D22A
MED18
RBL1
ADAT1
PLPP5
NAV2
CCL7
CCL11
SLC41A3
UTP3
SESN1
CEP57L1
SGMS2
CPD
CCDC142
TTC31
PHACTR4
MYOM2
RASL10B
TIAM2
ZRANB2
NFYC
CHPF2
ABCF2-H2BE1
ABCF2
PDF
NIP7
COG8
SIPA1L2
OCIAD2
CEBPA
TBC1D1
LMBR1
FBXO46
CNIH3
MPP1
TRPV2
ELSPBP1
BSPH1
SUMO3
GRAMD4
NRL
DCAF11
SOX30
UIMC1
CCNG2
SPEF2
TRAFD1
IAPP
ZSCAN4
CD320
FCRLA
KLHL34
ZNF416
PES1
BZW2
OPRL1
UFD1
CDC45
RGS19
LKAAEAR1
PLS1
GPN2
GPATCH3
RNF223
CARHSP1
RIN2
SSUH2
SYT16
EXPH5
PRAC2
PRAC1
HOXB13
LGI2
PRPF18
VPS13B
CTSB
DDX47
EFCAB14
SFXN3
PDZD7
RPS7
ZNF501
ZNF502
WTAP
TRIM25
CCNY
RIPPLY3
ARMC1
EIF2AK3
MMP28
ZNRF3
GPR1
TTLL12
TTC32
GLRA1
FKBP5
RMND5A
MSRA
ZNF230
ZFP36L1
RPS27A
CLHC1
PIP5KL1
RPRD1A
CLASP1
PC
PAFAH1B1
DPM2
CSNK1E
NTN1
PNPLA5
ZNF662
ABLIM2
SPSB1
EIF3E
CLTC
FANCC
FOXP4
PREPL
CAMKMT
CDKN1A
KDELR1
GRIN2D
KLK11
KLK10
CLDN7
TTC9B
SLC1A3
RIIAD1
CELF3
CCNP
ISLR
MRPS18C
HELQ
MRPS23
RGL2
PFDN6
ZNF22
DCTPP1
NHSL1
UBE2F
BANP
METTL25
CCDC59
MRPL48
LZTR1
TOMM40
SASH1
BAMBI
C2orf66
ZNF165
GTF3C3
CD209
NAA20
OR1F12
ZNF518A
MVB12A
TRAPPC8
GRAMD1C
LOC100509620
PRDM1
KIAA0319
CLIP2
MYO1B
BST2
HTR3B
GABPA
ATP5PF
CASP7
E2F2
C19orf48
EFHD1
LRRFIP1
RAB40B
EAPP
SAR1B
SMIM12
CMSS1
KCNAB2
KCTD9
CDCA2
ORC2
AKR1D1
PEF1
LGI1
CD109
SAP130
KRTAP10-9
TLE7
ZNF75D
SETD4
CBR1
SLCO4A1
PSMG4
MSANTD4
GNA13
ECPAS
C2CD4D
UTRN
SAT1
THEM5
UQCRC1
TMEM89
ZNF792
DLAT
OSBPL8
IRAG1
ZNF454
IFT46
ARCN1
ZNF2
KAT7
TNFRSF10B
CACTIN
RUFY4
RAI1
SPR
CPPED1
TIGD1
EIF4E2
LCP2
ARHGEF18
SNX3
ZNF14
C12orf40
ABCD2
ADAMTS17
TEF
NRDE2
SH3BP4
PSG9
KRT6B
KRT75
CALD1
MAIP1
EXOC2
RIF1
ALG14
SFSWAP
SLC23A3
HECTD4
RETREG2
CNPPD1
ALDOA
NECAP1
ZXDC
NEDD4L
NOP16
HIGD2A
BEST2
IMP4
CCDC115
GNA12
SORBS1
PDZRN3
ZNF823
ROCK1
HSCB
CHEK2
KLHDC7B
TYMP
ODF3B
SGIP1
ZSCAN31
ELAC1
TM9SF1
IPO4
TXN2
ARHGEF39
SIT1
CCDC107
SERPINA3
C1orf158
CYB561
FERMT3
PJA1
AQP12B
AQP12A
ZNF527
POLR2J3
RPS14
TPGS1
EEF1AKMT3
ADGRL1
TRAF4
EHD2
ZBTB8OS
RBBP4
OVOL3
ZBTB25
ZBTB1
TBCB
POLR2I
SF3A1
CCDC157
NEURL4
ACAP1
CDR2L
HID1
SPATA1
GNG5
METTL1
CYP27B1
RRP12
TRIP10
GPR108
PTPRK
PDXP
CLCN4
PRRC2B
PUS10
PEX13
TMEM259
CNN2
PCYT1A
CERK
SRSF1
ZFP36
PLEKHG2
UTP18
MBTD1
POLD4
ZNF550
INO80C