ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX028592 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◣ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

SMYD3
CCDC200
PI4K2B
ZWINT
TSKU
MKLN1
LDHD
ZNF436
OBSCN
ZNF3
BCR
AADACL4
C1orf167
ZNF572
NT5C3A
TATDN2
BRSK2
SUMO3
GAMT
ZSCAN30
ZSCAN31
IRAK2
GORASP2
DBNDD2
TEAD2
DKKL1
IL36A
MAMDC2
ZNF165
KRBA1
ATP5F1B
FAM184A
BAX
UQCRC1
TMEM89
YY1AP1
DAP3
ZSCAN32
ZNF174
THEM4
YPEL3
TBX6
COL18A1
ATP8B2
AQP10
THUMPD1
ST20-MTHFS
TBC1D22A
KCNJ15
F2RL3
WDR74
STX5
GLRA1
ADCY3
SETDB1
PRKAR2B
GTPBP4
CYB5R4
ZNF263
CCL24
CPA2
UBE2F
PRRT1B
ZNF562
CPT2
ZNF708
FN3K
SELENBP1
PER3
DIP2A
GSTM5
SLC30A7
EXTL2
COMT
TXNRD2
IGFALS
GJC3
ZNF341
RBPJ
MON2
CALML3
EXOC3
ENG
ART1
CD2
MROH7
IER3IP1
PRDX6
MAP1LC3B2
SAP130
NARS2
S100A6
S100A5
S100A4
S100A3
SNCG
MMRN2
ZNF777
ZNF169
ZNF550
DTWD2
ZNF792
ZNF627
ESR2
BAAT
TMEM140
SLC27A5
RBM33
ZNF662
APOL4
SAMD9
MRPS16
KIF5C
TOPAZ1
LGALS12
PLAAT5
NCKAP1
LEP
ZNF514
ZNF555
OR4K17
BCL7B
ZNF30
ZNHIT6
BSDC1
MAP3K4
ZNF426
GPRC5C
LMLN
IQCG
PPIG
DCTN6
MBOAT4
CEP85
SLC1A7
TAS2R39
ZSCAN29
TUBGCP4
CDCA7
CYC1
GPAA1
EXOSC4
ZNFX1
IQGAP1
ADCY10
KAT6B
C4B_2
C4B
SAMD7
TNXB
TRIM48
ZNF143
FAM209A
ELAC1
ZBTB26
RABGAP1
EIF4EBP1
ARHGAP39
BPIFB3
SARS2
MRPS12
DLK2
ZNF433
FAM227B
DTWD1
CYP4F22
EFCAB10
MANEA
TMEM44
FEM1C
LZTR1
ZBTB8B
PEX7
SNX20
FDX1
DUX4
EIF4A3
MYOG
ACER2
LMTK2
NOS3
AFAP1L1
DEGS2
BTBD8
ZNF623
VPS13D
TTC7B
ERN2
FEM1B
GPR35
ZNF440
ZNF491
PADI4
GRAMD4
ZNF189
MRPL50
FBXO8
CEP44
PTPRN2
PLA2G1B
CATSPERE
ADSS2
ORC5
FAAH
METTL7A
ZNF761
LBP
TRIM32
ASTN2
IL21R
LONRF2
H4C8
PRSS38
IL22RA2
TMEM62
CANT1
ZNF230
C1QTNF1
SLC28A2
ZNF32
DUXB
ADI1
PSEN1
METTL8
DCAF17
C2orf88
CATIP
CYP17A1
RSF1
AAMDC
DHRS7B
ACSM2B
ZKSCAN3
MRPL20
ANKRD65
TMPRSS12
AUH
ARL2BP
HACD2
CHST3
TOP3B
PRIM1
HSD17B6
SPATA45
CCDC130
COX6A1
CTAG1B
CTAG1A
APOBEC3B
ZNF614
SPIDR
MTRNR2L8
ZNF222
SLC25A23
CRB3
POM121L2
SYT3
PTGER2
ZNF24
C2orf66
PDCD7
VPS37C
TXN2
RAB39B
SCCPDH
TYW3
CRYZ
ACAA2
EXOC6
RSU1
ARL4D
TAS2R41
EHHADH
ZNF134
IFI6
LOC110384692
C4A
MIPOL1
CFAP43
ZNF317
ZNF394
TESC
HS2ST1
ZFP69
ACTR3C
LRRC61
DIRAS1
TCF25
ZNF878
FOLR3
MID1
DIP2B
CHD1L
UBE2D3
CISD2
HERPUD2
ATXN2L
TMC7
UXS1
MSH3
DHFR
MTRNR2L2
RAX2
MATK
RGS18
ACOT2
HEATR4
SEL1L
IFT88
ZNF441
EFHD2
GUCA1B
FKBP9
TACC1
ZDHHC14
TAF12
POLE4
MLLT1
ZNF300
ZNF438
LOC102724770
DGCR6
TMCC3
LCN15
LCN8
LCN6
ACP6
TLE7
FRG2C
FRG2
MTRNR2L1
SMCO1
COL23A1
WDR33
PDP1
MUC3A
SNX16
ITGB3BP
EFCAB7
DUSP6
ZNF527
MID2
FGD3
GBA
GLT6D1
RHOT1
FAM153B
TTLL1
PDE11A
NOTCH2NLC
CNGA1
NOTCH2NLB
NOTCH2NLA
COQ9
CIAPIN1
TMEM242
SNX11
CBX1
TMEM229B
FAM234B
NUF2
B4GALNT4
FAM193B
APOC3
APOA1
CRP
SPATA33
ADAM21
AFAP1
BCAR3
PAXBP1
RBBP5
MTF2
RPS7
TLR2
FGL2
ZNF324B
MAPK11
RGS21
ZNF117
SSBP1
TSPAN5
NOX5
STX16
PDE4DIP
DMAP1
AURKAIP1
PIP
LUC7L2
FMC1-LUC7L2
FMC1
RPL39L
SAMD4B
GMFG
MINDY3
EDF1
ZNF132
CYP2C9
TEDC1
CRIP1
ACY3
SF3A3
PXDNL
NEMF
PUM1
CRIP2
ACYP2
ANP32D
RFC1
ZNF613
MED23
MYH2
SHISAL2B
DTX2
NDUFS7
ST6GALNAC6
INKA2
DDX20
DMXL2
CLIC3
C10orf143
NME1
SDR42E1
ST3GAL5
BANP
COX16
TTLL12
MAPRE2
TMEM70
RPS29
DCP1A
PEX3
ADAT2
MDM4
TMEM41A
RPL27
RAB37
SEM1
GPD1L
AKR7A3
DNAJC25-GNG10
DNAJC25
EIF2D
RABGAP1L
KMT2A
INTS12
GSTCD
LMLN2
B4GALNT3
CEP72
YWHAQ
ZNF83
YJU2
SATB1
CALCB
GALNT1
JMJD1C
IFI35
ZMPSTE24
FRA10AC1
ELOC
PLEC
DCAF10
TMEM262
MRPL44
SGPP1
PNMA3
ACOX3
NUDT15
FASTKD1
NKX1-1
SNAP47
GDPGP1
CIB1
MRPS33
SULT1C3
ZNF577
PRAMEF1
HMGB1
NDUFB3
FAM126B
EAPP
DSTYK
POLD1
TTC32
POLR2J3
ZBTB44
SAMD14
NPAS4
NARF
CALD1
USPL1
ZNF594
SKP2
LMBRD2
MRPL55
TTC30B
BRF2
C19orf18
POU2F1
TDP2
ACOT13
STX18
C2orf69
TMEM43
CHCHD4
TBC1D19
SCGB1C2
SCGB1C1
NOTCH2
HAUS5
TRIP4
PCLAF
TMCO2
ZFP30
GTF2H2
PPP2R3A
CLK4
PNPLA7
MRPL41
SELENOH
PROKR2
SLC41A3
CFHR4
SLC24A1
TRMT44
CARD6
NRARP
ZNF501
DPY19L4
PRELID3B
ZNF226
TMEM14C
BTN3A3
ATP1A1
MOB3A
IZUMO4
RPL37
CHMP7
DRG2
PRKACB
SPATA13
PHRF1
SMARCD2
TMEM106C
NXPE4
RERE
ZNF443
FRMPD4
TOR1AIP2
TOR1AIP1
ODF3
COMMD2
PIK3R1
SRPRB
COQ8A
ZNF487
SLC33A1
ABLIM2
TM9SF1
PAFAH2
RBBP9
NSFL1C
C1orf159
CYBC1
TARS2
LIPA
PSMD8
MRPS31
ARHGAP45
GTDC1
ZNF561
POLR3B
PPIP5K2
FAIM
FKBP5
TFPT
PRPF31
TTC26
RTP5
RPS14
CXCR2
CEACAM21
NME4
DECR2
GSTA4
METTL25
CCDC59
TRIP11
ZNF408
ARHGAP1
ALG10B
PPP1R11
SPACA3
PCYOX1
GALK2
YTHDC2
TATDN3
NSL1
SEC22B
KDM3A
CLDN16
ANGEL2
REEP3
UTP3
SEMA3D
ACBD6
SFT2D3
SLC44A1
SLC25A51
DNAJB12
GIMAP4
CAT
MAD1L1
GTF3C3
GCNT3
FRG1
IPO4
BAIAP2
VARS2
GTF2H4
THAP11
LOC100289561
TIGD2
EIF3L
ANKRD54
ZNF556
RAD54L2
PAIP2B
EIF3F
BAG3
INTS5
GANAB
VTA1
NMBR
RPIA
ZER1
TMEM68
TGS1
GOLM2
EPS8
IFNAR2
ZNF391
ZNF280A
ZKSCAN7
ATF7IP2
NRBP2
SMG8
TIMELESS
NUTF2
CENPT
TM9SF2
LSG1
GTF2H2C_2
GTF2H2C
SUPT7L
SLC4A1AP
CD209
PARP15
REXO4
ADAMTS13
INO80C
WDR36
TBC1D13
RUVBL1
SLC2A7
TESK2
MMACHC
KIAA1549
SNIP1
POM121
DNALI1
NBPF1
ACTL8
FGFBP3
MRPL40
HIRA
LRPAP1
FBXO31
DIO2
GLO1
HLA-E
MYL12A
ACTRT3
HTR5A
BORCS7
RPGRIP1L
FTO
COLEC11
POLR1H
RPL11
CLPP
STAT3
ITGA4
DCLRE1B
AP4B1
CAMK1D
EIF1AD
CST6
BANF1
RMND5A
LRIG2
STAT1
MTERF4
MACC1
ZNF285
RTTN
ZNF350
SAR1B
PARK7
DRAP1
C11orf68
FAM207A
PPP6R1
TEX46
KDM1A
MTERF1
TEFM
PDCD2
PLA2G4E
MSRA
BMS1
RILP
ZNF841
C3orf14
CDK5RAP1
TACO1
GINS1
RNF187
L2HGDH
DMAC2L
ZNF829
ZNF568
CCNT1
TTC13
ARV1
JMJD4
KRTAP10-7
SRRM3
SLC9A1
SCMH1
ANK3
MAP3K2
EPB41L2
SNX17
EIF2B4
ZNF891
ZNF10
SCAND1
ZC3HAV1
PRIM2
PSMF1
ETFBKMT
TXNL4B
DHX38
TMCC1
ATR
USP30
ZBTB45
GBP4
THOC5
PDE6D
COPS7B
ORC4
MBD5
ZNF582
NBN
POLR3E
NPR1
ILF2
NCKAP1L
CCSER2
REN
DEK
PRRC2B
MRPL21
IGHMBP2
CREBL2
PHGDH
TMEM161A
TTYH2
SMIM12
SGCE
PEG10
SLC29A2
RAB30
CCDC97
TRUB2
COQ4
NCOA7
WDR11
ABL1
FAM228B
GTF3C5
ZNF772
TNFRSF1B
TMEM222
CYP46A1
PDS5B
MOB4
LARP1
PHB
MTRNR2L9
CTSV
ATP5MC2
KANSL3
FER1L5
ZNF502
LPIN1
SUPT6H
SDF2
BACH2
ZNF540
KRTAP10-8
RALBP1
DUS1L
CIPC
ZBTB40
NECTIN4
FBXL12
SMAD1
SCAF11
HLA-C
CD47
ATF7IP
CCDC150
EML5
MCF2L2
TP53I3
SF3B6
MRPL1
ZNF513
OTUD7A
MRPS18C
HELQ
FAM133B
CYB561D1
ADNP
TNFAIP8L2-SCNM1
TNFAIP8L2
ZNF571
MTA2
DNM1L
LY6L
HYAL1
B3GNTL1
TMED9
GAS2L3
FRRS1
ZNF207
C17orf75
OAZ3
LSS
HSPE1-MOB4
HSPE1
HSPD1
WDR43
AKAP10
SMIM31
SAMD4A
RMND1
ARMT1
B4GALT7
CLTB
DPP9
KLHL20
BNIP1
C1GALT1C1L
SPAAR
HRCT1
MRPS23
KRTAP10-9
C16orf54
CPPED1
CD14
IST1
LGR5
MTIF2
PCP4L1
TUT1
TMOD4
SCNM1
LYSMD1
GASK1A
ZNF557
NUP54
GTPBP3
ANO8
COPS4
PDCD6IP
MMP7
GFM2
KIF2C
PGAP6
ERV3-1-ZNF117
ERV3-1
N4BP2L1
ZNF611
BRWD1
PLEKHM3
ATP9B
NFE2L3
FAM180B
TNFAIP8
NDUFV1
GABPB2
GOLGA5
DUSP16
DND1
AGL
BDH1
ZNF609
HACL1
BTD
UGT1A10
WDR55
STAU1
RMDN2
BCL9
CDYL
RPS20
DDX18
CTNNB1
TMEM79
SMG5
MACROD1
NCBP3
MRPL48
SEC13
EXO5
ZCCHC4
RPL10L
SNRPB
RNASET2
ABR
ANXA2
UBE2H
SNAP29
PI4KA
MAIP1
POLG
GRPEL2
NDUFS3
KBTBD4
NR1H3
ACP2
SERHL2
DNAJC3
CYREN
NAA20
TTI2
CDC73
EPM2A
ARID1A
ZNF566
MLEC
HNRNPD
CBWD5
C10orf99
TPR
ODR4
ZSCAN25
C18orf21
FAF1
FBXO38
TMEM101
NRL
MAN2C1
DCAF11
OPA1
ATXN7L2
CFAP298-TCP10L
CFAP298
MYNN
CASP4
TMEM114
MRPL30
MITD1
RTCA
NAA80
HYAL3
LRP5L
VBP1
F11R
TPM1
INPP4A
GFI1B
C8orf37
CCNC
PIN4
SLC45A4
DGKZ
CASP10
GPAM
B3GALT2
CBWD3
TTC4
MTRF1
MNAT1
PRPF18