ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9823128 | GM12878
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◣ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

DUX4
LOC102724770
DGCR6
STARD10
FRG2C
IPO13
CTU1
SCGB1C2
SCGB1C1
ODF3
C1orf159
PHF13
TBC1D23
POLR2J3
RANGAP1
MTRNR2L1
DESI2
RAB5C
AURKAIP1
VARS2
GTF2H4
SDCCAG8
CEP170
INTS9
HMBOX1
TNFAIP1
IFT20
LOC100289561
SPDYE6
RRP36
MEA1
B4GALNT3
EIF1B
IL21R
C5AR2
DHX34
RPGRIP1L
FTO
TIMM22
HEXIM2
METTL25
CCDC59
NAA80
HYAL3
IFRD2
PSMC4
JOSD2
ASPDH
PACC1
TIMM13
NOLC1
TMEM245
RTTN
PES1
TNFAIP8L2-SCNM1
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
CLIC4
NOL11
ENDOG
UPK3BL1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TSSC4
RALBP1
HDGF
MRPL24
ZNF565
ZNF146
PAFAH2
TESK2
MMACHC
LRRC37A3
CFAP20
NUDCD1
CCDC174
TSN
MAMDC2
FRG2
PANK3
FEM1A
ZNF286A
CDCA3
STXBP3
TXLNG
FBF1
PHB
EFCAB2
KPTN
L3MBTL1
ZNF56
RBAK-RBAKDN
RBAK
SMYD3
C19orf25
LRRC29
ZNF444
ZNF189
MRPL50
GNAI2
SNX27
CARM1
GPI
BTRC
DUS3L
PRR22
CHMP4B
EEPD1
GORASP2
PSMD3
CIPC
KNTC1
CLPB
CHD8
CDK13
EML6
DHX16
RAD23B
MYO15B
RPS5
FNTB
GPBAR1
PNKD
AAMP
AHCTF1
CHFR
SNX3
NPRL2
CYB561D2
TMEM115
ANO10
MRPS22
RMND1
ARMT1
GOLGA5
ZNF559-ZNF177
ZNF559
CHMP5
BAG1
SEC11C
RPL5
PRCC
SP1
ZNF585A
LANCL2
HYAL1
RPL36
MICOS13
HSD11B1L
LRFN3
LMLN2
DNM1L
TPR
ODR4
C11orf49
AP2S1
ARHGAP35
ACIN1
STK25
GSK3A
C14orf119
PSMD8
RAD52
SUGCT
MPLKIP
PSMD2
SH3GLB2
MIGA2
MBD1
CXXC1
SERF2
NPAS1
ZNF235
SAC3D1
SERINC4
HYPK
WBP1
INO80B
RNGTT
WDR62
THAP8
SV2A
BOLA1
CACTIN
GALNT1
NDUFV1
TMEM59
TCEANC2
EPRS1
ZW10
CLDN25
SMUG1
ZSCAN22
ASIC3
SLC4A2
CDK5
CLP1
YPEL4
SLC37A4
MRPL48
SPHK2
RPL18
FAM83E
ZNF268
BAX
UBR2
RETSAT
ELMOD3
BRMS1
B4GAT1
RIN1
QTRT2
CCDC191
ZNF527
COQ8A
FAM133B
SAMD1
C19orf67
MISP3
ZFYVE1
TTC13
ARV1
ZNF566
THOC3
RPS27A
CLHC1
UNKL
C16orf91
UBXN7
PRMT2
RTN3
ATL3
ZNF599
SOX6
AP2M1
ZFYVE19
DNAJC17
C11orf58
SKP2
LMBRD2
TMEM127
CIAO1
UMODL1
ST20-MTHFS
MRPL17
MAP3K7CL
CCT8
FAF2
C12orf43
COX16
GFI1B
TSC1
GTPBP2
MAD2L1BP
TAOK3
VPS26C
SUDS3
FIS1
RAB18
CLDN15
TSNAX
NMT1
DCAKD
ORMDL3
GSDMB
C5orf24
MAP2K7
NUF2
INKA2
DDX20
MRPL11
PSD
FBXL15
TAF5
SF3B5
USP32
DIXDC1
PLCD1
ZNF420
IPO7
CRYAB
C11orf52
ZNF473
VRK3
IFT88
ZNF25
HEMK1
C3orf18
EEF1A1
POLK
CERT1
ZC3H11A
SF3B2
GAL3ST3
ZBED6
EEF2KMT
CDK12
MED1
SLC35B4
FBXL19
OCEL1
NFXL1
SURF6
NUP205
CBR4
RB1CC1
ZFP14
PHF12
KMT5A
RILP
GSPT1
SERBP1
FBXO46
GDAP1
UBE2T
PPP1R12B
MEIOSIN
UPK3BL2
CKMT1A
BANP
PRPSAP1
SERTAD3
FBXO34
ZNF586
PCM1
CCDC142
TTC31
CKM
SMIM13
RCOR3
ARRB2
PELP1
SLC39A11
ZNF808
SYMPK
FOXA3
PLEKHO2
SH2D3A
VAV1
RELL1
DYNC2I1
AHCY
SCAF1
RRAS
WWOX
RPL26
KRBA2
MRPL38
TRIM65
UBQLN4
RAB25
LAMTOR2
FZR1
ZNF79
DOHH
SDR39U1
ZCCHC4
TMEM18
RIF1
SUCLG1
ZNHIT2
MRPL49
FAU
ABI1
TM7SF2
SLC33A1
RPS6KB2
PTPRCAP
C10orf88
PEMT
MTCH2
SEMA4F
M1AP
ELMOD2
INTS4
ZC3H3
WDFY2
OGA
HNRNPA3
DDX11
RTEL1
STMN3
TIMM10
SMTNL1
POLR2H
CLCN2
ZNF773
CCDC146
PPP4R3B
R3HCC1L
RPS12
ZCCHC8
KLHL12
ERCC4
CNPY2
SCAI
CPT1B
CHKB
ZBTB45
ROM1
EML3
B3GAT3
PLD3
C19orf47
POLE3
C9orf43
ALAD
P4HA1
PPP1R12C
TRIM28
MRPS31
EMILIN1
OST4
KHK
NOP14
GRK4
TSNAXIP1
RANBP10
FHIT
ZNF225
INPP5A
INTS10
TMTC3
CEP290
CMTR1
GPD1
COX14
HARBI1
ATG13
ECSIT
CNN1
PGF
THYN1
ACAD8
GABARAP
PHF23
DVL2
PLA2G15
ESRP2
NOL6
SMPD3
ENOX2
ACP6
ZNF891
ZNF10
ZNF461
GOSR2
DDX47
NEURL4
ACAP1
ZC3H4
TCOF1
GBA
PLK3
TCTEX1D4
BTBD19
TDRD9
ATP5MPL
SIRT4
TMUB2
FAM187A
EFTUD2
CCDC103
RNF14
SERP1
EIF2A
ZHX1-C8orf76
ZHX1
ZBTB37
SRRM2
CEP20
SLC25A20
COPS4
CBWD5
MARK2
DDX56
TMED4
LARS1
ZNF350
SMU1
ZNF416
PCBP2
ZIK1
TRIM59
CDK5RAP3
DMPK
ERICH4
DMAC2
MAK16
NACA
UCN2
PFKFB4
SAFB2
SAFB
CHAC2
SIX5
PLEC
ZNF331
CAPG
PA2G4
YWHAG
PDCL3
PRSS8
PRSS36
SH2D6
CEP97
SLC25A11
RNF167
PFN1
GP1BA
MTIF2
POLR2E
GPX4
PPP6C
THRAP3
LYRM7
HINT1
DOP1B
STYX
PLAUR
ASNSD1
ASDURF
MCCC1
B9D1
MFAP4
THNSL1
MAPK7
MEN1
MAP4K2
EEF1G
RAB1B
ZNF408
ARHGAP1
EIF3F
TSGA10
C2orf15
CYP20A1
ID1
PHF19
SRCAP
LOC730183
ATP6V1FNB
ATP6V1F
FAM72C
VPS50
HEPACAM2
STRIP1
TMC8
TMC6
FAM72D
SESN2
SMG1
C17orf99
NDUFS7
CBWD3
CBWD6
MRPS14
CEP164
PRKCSH
CCDC151
DNAJC16
CASP9
CAPN10
ALKBH5
RPS9
SKIV2L
NELFE
MFN2
TSEN34
UBTD1
MMS19
SF3B1
MBOAT7
VDAC2
CTNNBL1
SETMAR
CEP128
TMEM222
CCAR2
C8orf58
CCNB1IP1
PARP2
ZNF383
ZNF585B
OSCAR
NDUFA3
TIAL1
PSMD1
BICRA
TMEM143
SYNGR4
TMEM199
SEBOX
POLDIP2
ZNF576
IRGQ
RPL7
RDH10
NBEAL1
BRF2
TARS2
DCLRE1B
AP4B1
AAAS
RAB1A
ZNF451
KBTBD7
CDK8
FAM126A
SYCE3
SLC23A3
CNIH1
RNF43
ZNF284
NHEJ1
RPL18A
FYCO1
ZMAT5
UQCR10
CCDC130
RAD51AP1
C12orf4
CDK11B
CDK11A
UBXN4
TAOK2
UTP6
UTP23
TMEM229B
NME1
ZNF772
MUC1
SH2B1
ZNF419
SPTBN4
C7orf25
PSMD12
FAM189B
TUFM
SCAMP3
SLC25A19
BLVRB
USP14
C6orf136
ART1
BORCS7
CPPED1
MRPL45
MVB12A
CAAP1
TPRKB
HSPBP1
MYORG
BRSK1
PPP2R5D
PEX6
C9orf24
LMOD1
TIMM17A
CLDN6
THOC6
HCFC1R1
TNFRSF12A
DNAJB12
TMED1
GLIPR1L2
ZNF337
RRP9
PARP3
COX8A
TMED7-TICAM2
TMED7
SETD3
CCNK
METTL9
SESN1
CEP57L1
HPS6
ARMH3
CCDC77
RPL13A
EIF3D
IARS2
BPNT1
RPS11
TERF2
TFB2M
CNST
PIK3R2
STAT2
APOF
DCAF1
ZNF7
WDTC1
RPL27
IFI35
CDC73
ZNF589
CUL2
PKN2
RAB5A
EFHB
C6orf47
APOM
FAM220A
UBFD1
EARS2
ESCO2
CCDC25
CD82
POMT2
GSTZ1
CLPX
WDR87
SIPA1L3
HSPA13
GPANK1
CSNK2B
LY6G5B
NTAQ1
SPEGNB
GMPPA
PARP15
HTRA2
DQX1
MRPS35
SNAPC3
GSN
SIVA1
OVOL3
TBCB
POLR2I
RAB14
WDR38
RPL35
ARPC5L
ZNF787
GLIS2
GFM1
ERI1
DDX23
CTDP1
UBE4A
SDHB
SRPRA
THEM4
ATG5
RPL29
PARD6B
L3MBTL2
CCDC200
LUC7L2
FMC1-LUC7L2
FMC1
LRIG2
TIPARP
WDPCP
MDH1
SHOX2
RSRC1
APEH
VCPIP1
C8orf44-SGK3
CBX8
ORC4
MBD5
ABL1
TAF12
HSPE1-MOB4
HSPE1
HSPD1
RBM28
RWDD1
YIPF2
TIMM29
MPI
SCNN1D
UBE2J2
ICE1
IPO11
DIMT1
ECH1
ARNT
CDHR5
IRF7
DRG2
CATSPERE
ADSS2
TLCD1
NEK8
RPL23A
CDK5RAP2
RAB34
TMEM41B
ZFHX2
BCAS2
PROCA1
DNAL1
CREB1
SKAP2
THTPA
RALGAPA2
PPRC1
PSMD11
CD55
GAPVD1
C12orf50
C12orf29
SRP54
GATB
ZNF573
ZFAND2B
BARD1
ZNF417
NRTN
ZFPM1
HINFP
HMGB1
USPL1
GTF2H2C_2
GTF2H2C
SLC35E2A
VKORC1
MAPKBP1
PRSS53
ZDHHC12
PPP4R3A
CC2D1B
NIPSNAP1
ZMPSTE24
TMCO2
CCDC150
BNIP1
PSMB7
STRADA
MARCHF2
MKNK1
IBA57
MZF1
MATN1
GGT6
SGCA
MYBBP1A
RTN2
ZNF567
AOPEP
AFG3L2
SAMD8
DUSP13
EIF3E
CMC1
APC
FAM160A2
CNGA4
TTLL12
LSG1
ALG10
HPCAL1
COMMD1
USP35
KCTD21
MORC3
EP300
VTA1
NMBR
SNX17
EIF2B4
ZNF513
LZTR1
TEKT2
ADPRS
RRP15
MGST3
SPATA25
ZSWIM1
PGRMC2
NEURL2
CTSA
SNF8
PLEKHB1
ATP5PO
ZNF468
PARS2
PRR30
PREB
ZNF212
TSACC
CCDC6
ATP6V0D1
AGRP
NKIRAS1
ATAD2B
ICAM2
ZNF180
GPS2
EIF5A
RPL15
RHBDD3
EWSR1
CCT3
UHRF2
TSPAN17
REXO1
MIB1
LIN52
ALDH6A1
POLD1
RTL10
GNB1L
NR1H2
USP21
PPOX
TOMM20
PKD1
TIMM50
SPAST
YPEL5
TVP23B
PMM1
ZNF845
TMEM70
ELOC
ZFC3H1
THAP2
MINDY2
DCP1B
RABIF
DEDD
PUSL1
ACAP3
TRAPPC4
RPS25
USP19
NME4
DECR2
CCNT1
MFSD8
ABHD18
MTIF3
XPC
LSM3
KMT5C
NOL7
CFAP410
POLR2K
SPAG1
TOGARAM1
KLHL28
TMEM14B
PITPNB
ZNF274
LBHD2
CCDC24
LEPR
POLR2J
LEPROT
TRAPPC3
MAP7D1
TOMM40
PPP1R35
ZCWPW1
MEPCE
ZNF133
INVS
ERP44
DELE1
SMG8
YTHDF2
CSTF2T
RBM25
TESK1
KIAA0895
MGRN1
UBALD1
SPRYD3
POU5F1
TCF19
CCHCR1
TMEM214
DNAJC25-GNG10
DNAJC25
TOR1AIP2
TOR1AIP1
BDH1
SLC17A5
PPA1
SYTL3
NUDT5
CDC123
DYNLT1
PABPC1
SGTA
THOP1
GRSF1
NUDT15
KIF2C
N4BP2L2