ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX065546 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◣ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

BRSK2
KCNJ15
ZNF436
OBSCN
PI4K2B
CYB5R4
SMCO1
ZNF550
BSDC1
ITGB3BP
EFCAB7
ZWINT
APOC3
APOA1
ZNF555
CCDC200
MID2
C19orf18
WDR33
ZNHIT6
WDR74
STX5
ZSCAN32
ZNF174
ZNF514
FGD3
IFNAR2
ZNF24
AADACL4
TSPAN5
SRPRB
INKA2
DDX20
SMYD3
DEGS2
KRBA1
AKR7A3
YPEL3
TBX6
LDHD
ZSCAN31
UBE2F
TTLL1
RRAGB
ZNF134
MAMDC2
SNX11
CBX1
ZBTB26
RABGAP1
OPRL1
RGS19
LKAAEAR1
F2RL3
ZFP30
SELENBP1
UQCRC1
TMEM89
DISP1
STC1
TMEM161A
SAMD14
NXPE4
ZNF32
CPLX1
GBA
ZNF572
LCN15
LCN8
LCN6
ZNF829
ZNF568
KAT6B
RABGAP1L
PDE11A
MAPRE2
DNAJC25-GNG10
DNAJC25
ANO9
PTDSS2
MRPL55
TBC1D22A
ZNF623
FRMPD4
EDF1
PRSS38
MTF2
TSKU
IL22RA2
ST20-MTHFS
SAMD4B
GMFG
SF3A3
DUX4
ZNF501
ZNF502
MTRNR2L8
DUSP6
RBBP5
YWHAQ
COMMD2
RNF187
KRTAP5-2
KRTAP5-1
ZNF433
ZNF878
COL23A1
ZNF891
ZNF10
TMEM229B
PTPRN2
TEAD2
DKKL1
GRAMD4
CANT1
RPL12
LRSAM1
C1QTNF1
ZNF3
CDCA7
COX16
ZNF527
DHRS2
ABLIM2
C10orf143
UTP3
GTPBP4
NKX1-1
CLTB
NUF2
ZNF726
ZNF300
ATP5F1B
ZNF792
DBNDD2
CFHR4
MROH7
TMEM109
TMEM132A
NT5C3A
IER3IP1
COL18A1
PRKACB
YY1AP1
DAP3
GPR35
ZNF292
GLT6D1
GALNT1
ZSCAN22
TBC1D19
ATP5MC2
ZBTB8B
ZNF404
EIF4A3
FN3K
FAM209A
PXDN
RPS7
MYOG
ZNFX1
ZNF426
TRMT5
SLC38A6
ZNF83
ZNF566
ARL4D
ACTL8
SOD2
WTAP
ANP32D
VARS2
GTF2H4
ATP5MF-PTCD1
ATP5MF
NRARP
TOMM20
TMEM41A
SSBP1
ID2
RWDD1
MMEL1
CCDC174
MRPS33
TSFM
SUCLG1
LOC100289561
ATP1A1
TARS2
IGFALS
HTR5A
RNF125
NEMF
SELENOH
RPIA
MAN2A1
EPHA3
SLC24A1
NTSR2
ZNF165
PLA2G4E
ZBED9
RERE
GPBP1
TLE7
SNX20
C4B_2
C4B
LOC110384692
C4A
CAT
ZNF772
TTI2
GPRC5C
RTP5
CEP85L
ZNF570
ZNF569
PRRT1B
ACTRT3
MYNN
SLC28A2
PNMA3
ZNF416
ZSCAN18
ZNF117
ATF7IP2
MAST4
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SLC1A7
NBPF1
NUDT14
MED23
TRIP4
PCLAF
VPS13D
PHGDH
CWC25
DPYSL2
PNMA2
TIGD2
SLC45A4
DMAP1
SLC43A2
ZNF662
MRPL1
ZNF790
CCL24
ZNF75D
FBXW7
MKLN1
PEX3
ADAT2
NDUFB3
FAM126B
GLIPR1L2
GTF2H2C_2
GTF2H2C
MIPOL1
MNAT1
CAPN11
LMBR1
C1orf159
TRIM41
BRAP
ACAD10
OSGIN1
ZNF614
FAM71E1
P2RX2
LRCOL1
EPB41L2
NDUFS7
NR1H3
ACP2
CFAP298-TCP10L
CFAP298
SERPINA3
YJU2
CYC1
GPAA1
EXOSC4
MLPH
NOX5
TNXB
LARP1
ARHGAP39
ZNF350
PDCD6IP
MTR
COX6A1
PEX7
SNRPE
FAM13A
MMS22L
ITSN1
CRYZL1
BPIFB3
FDX1
PLAGL1
CDC5L
C2orf88
C2orf69
PDE1A
GALNTL5
TESK2
MMACHC
CCDC130
MAIP1
ZNF879
TXLNB
JMJD1C
TDP2
ACOT13
CAPN8
TFF1
TFF2
FAM184A
PRAMEF1
SMG7
RAB18
RAB30
BANP
ZNF226
PAFAH2
ERN2
TMEM242
TLR2
TTC32
DNM1L
RNF217
HDAC2
SUMO3
TTC26
FGFBP3
PPIH
RBBP9
SIKE1
RSU1
POM121
TMEM44
B3GNTL1
IFIT1
PAXBP1
FRA10AC1
DNAJB12
PRRG2
NOSIP
CDT1
PPRC1
APRT
FAM193B
SKP2
LMBRD2
MRPL48
TEDC1
CRIP1
CRIP2
ACP6
NME1
FAIM
TARS3
HECTD4
ZMPSTE24
TMCO2
CYP46A1
RAB5IF
PDGFD
RIOK2
SLC30A7
EXTL2
TMEM14C
LRRC49
THAP10
ZNF454
ZNF594
RUNDC3B
GCGR
TMEM38A
SMIM7
ZSCAN30
METTL25
CCDC59
KDM3A
STAT3
MRPS18C
HELQ
TATDN2
EIF2D
NEU1
LURAP1L
RTTN
SAR1B
CLEC18A
LRFN3
ZNF135
CHCHD6
PDXK
POMGNT1
PNPO
LURAP1
NARS2
REEP3
TACO1
TMEM125
HAX1
ZBTB33
IARS1
SLC33A1
BMS1
CD14
ARHGEF39
SIT1
CCDC107
TFPT
PRPF31
GABPB2
RCAN1
LIMK1
SLC35E3
TM9SF3
MMP8
CTAG1B
CTAG1A
ZNF391
CCNB1IP1
PARP2
SMIM13
MRPS14
MS4A10
PER3
CD2
MYH2
SAMD7
MACROD1
RANBP2
SLITRK5
DDX43
CYP4F22
ZNF540
ZNF571
MRPS23
HEXA
POLR3B
GALK2
PARK7
WDR70
NUP155
COPS2
TPM4
TRMO
ATP6V0E2
ZNF687
RPL27
IFI35
DEK
POLDIP3
TMEM43
CHCHD4
REXO4
ADAMTS13
FAM120B
RBM45
RPS3A
NOTCH2
BAIAP2
STOML2
FAM214B
OR1F12
PIGO
PUS10
PEX13
CALCRL
LRRC29
GOSR1
RPA2
ZNF354A
SYT1
ZNF708
SNCG
MMRN2
MANEA
EXOC6
TMPRSS12
KANSL3
FER1L5
BORCS6
MYO1H
WDR11
CDK19
AMD1
METAP1D
TRAF3IP3
GORASP2
DSTYK
SEMA3D
NECAP2
PIH1D2
NKAPD1
RIF1
SAMD1
C19orf67
AFAP1
TTLL12
ZNF440
ZNF491
IL36B
PRKCZ
IL36RN
SLC25A53
FAM199X
SLC3A2
MT1HL1
MYLK
SGMS2
SYNPO2
CACNA1H
NRL
DCAF11
TMEM259
CNN2
SLC2A8
CCNL1
THUMPD1
DCP1A
NME4
DECR2
TM9SF2
DIO2
REN
NCOA7
MOB4
PGAP6
ABHD10
ZBTB8OS
RBBP4
PKIB
SERINC1
AURKAIP1
TEFM
CUL5
SURF2
SURF1
RPL7A
MED22
SULT1C2
MSH3
DHFR
MTRNR2L2
NUP54
EPRS1
INTS2
GYG2
RPS13
SDR42E1
METTL7A
CLPTM1
APOC2
SLC35B4
RNF148
RNF133
SPATA33
ZNF324B
ZNF132
ZNF613
POLG
CDC73
TIGD1
EIF4E2
RRP1
MAP3K4
RPS29
PNPLA7
MRPL41
SPACA3
CCNC
RPL5
ISY1-RAB43
ISY1
FAM174A
BORCS7
DCLRE1B
AP4B1
ZNF20
E2F2
VPS45
IGFL3
SARS2
MRPS12
PPIP5K2
ZNF556
STAT1
GTPBP3
ANO8
COX7A2
NUP107
SLAIN1
TTC7B
STX16
ZNF841
MRPL30
MITD1
SLC35A3
ATL1
SNRPD1
SCAMP2
C1orf105
ECHDC1
PIGC
LUC7L2
FMC1-LUC7L2
FMC1
TMEM114
EPB41
ZNF791
ZNF490
GABRR2
PCDH15
LBP
MRPL40
HIRA
NOP16
HIGD2A
SLC25A16
SLC6A18
ARHGEF16
RHOT1
FGL2
MSRA
KRR1
DYNLRB2
MRS2
TTC3
TOGARAM1
KLHL28
PKLR
FDPS
KRTAP10-9
SLTM
LRP6
DCT
CRLF2
EFHD1
SF3B5
THEM4
OR4K17
TAF12
SMIM31
COPS4
EFHD2
HSPA6
TRIM46
KRTCAP2
N6AMT1
SIPA1L2
RPL27A
HACD2
PRDX6
APOBEC3B
EAPP
CARD6
RPL37
DRG2
FKBP9
RPS14
ZKSCAN7
TEX50
MIER1
DNAI4
SPANXB1
KCNMA1
EP400
EXO1
KRTAP13-3
NECAB2
PPIG
GSTA4
SMIM12
NOL12
ZMYND8
FAM13B
TRUB1
PLA2R1
NOS3
SEL1L
STXBP3
POLR1F
ZNF793
PFKP
STX18
EIF3F
SLC2A7
CCDC97
OAZ3
ATG5
ZNF385A
CLEC18B
UBOX5
FASTKD5
LAMTOR5
CCDC33
PIP4P1
OSGEP
APEX1
SPG7
PDP1
METTL8
DCAF17
SGPP1
TAS2R39
WDR36
ZNF263
LRP5L
METTL9
ZNF383
ZNF56
ZNF585B
TMEM107
RPS12
P2RX6
SPRR2F
PHRF1
LRRC59
RTL10
GNB1L
CDKL2
IQGAP1
TMEM262
ZNF443
CDK5RAP1
LIMS2
PRDM1
CSNK1E
RGS18
ACYP2
ST6GALNAC6
PSMD8
CLDN16
ADNP
TGFBR2
PLK2
USP45
TSTD3
TMEM72
SLC30A5
FBXO44
FOXO3B
HAPLN2
FBXO2
MOB1A
TCHH
MUC3A
MINDY3
ARID1A
TBL1X
HMOX2
NMRAL1
ERMARD
HIGD2B
BBS4
SRP54
ACTRT2
IRAK2
IFI6
LMTK2
LPIN1
ATF7IP
DCP1B
POLR3G
MBLAC2
CHEK1
SUPT3H
SNX14
PXMP2
POLE
ZNF561
TAF4
ALG10
ALG14
UBR2
ZBTB22
TAPBP
DAXX
PKP3
SMIM40
GPN2
FAM234B
CLIC3
ZBTB44
ZKSCAN3
TPR
ODR4
IFNAR1
ALDH9A1
MTMR9
CLN5
CCDC120
DPYSL3
CPPED1
ZNF846
DHX16
GABPA
ATP5PF
TRDMT1
USP21
DDX41
DOK3
FCGR3A
GDNF
NUP205
PPOX
HBS1L
ADCY10
NARF
CALD1
BRF2
CYBC1
ARHGAP45
C3orf14
GOLGA5
GRPEL2
ATG4C
SSTR5
B4GALNT2
H2BU1
H2AW
TMEM106B
CCDC124
SLC2A4
INPP4B
VAX1
LRP3
SULT1C3
TPK1
PHIP
TIAM1
SRP9
GPR137
FOXP1
DNAJC19
WBP11
C12orf60
ELAC1
MAD1L1
C8orf37
SLC17A5
RIMBP3C
RIMBP3B
ZNF335
MRPL24
CRNKL1
CFAP61
CHD1
ACY3
FAAH
SNIP1
DNALI1
CNIH4
FANCC
DHTKD1
RSL24D1
GTF2B
PNISR
ETNK1
PLS1
TRMT11
GOLPH3L
ASCC1
ANAPC16
NMT2
TAAR5
PDE4DIP
ENG
TIMELESS
SUPT7L
SLC4A1AP
ZSCAN25
TMEM101
WBP1
INO80B
SYF2
SYNCRIP
SAP130
RGS21
LGR5
MTIF2
ZNF189
MRPL50
TMBIM4
HP
LOC102724265
SEC23B
PES1
HEATR1
DNAJC24
DCDC1
TAF13
IRF9
DUSP12
LOC100129484
MIR1-1HG
ANKRD36B
TNRC18
C20orf203
CERCAM
MRPS16
CEP85
ST3GAL5
HMGB1
USPL1
LRP5
TNPO3
ABCB10
EIF3D
C6orf47
APOM
BAG6
SLC25A44
PLCH1
SLC25A21
RUFY4
CYP17A1
VTA1
NMBR
CATIP
ZNF285
PRAMEF14
PRAMEF13
PRR4
TMEM116
ERP29
ARL14EP
COMMD6
UCHL3
INSYN2B
TM9SF1
ZNF408
ARHGAP1
IPO4
RAD54L2
DND1
WDR55
COG2
GRM4
ARID3B
ABCA3
UBE3B
KCTD10
LGALS8
DEDD
MICU2
KLHL32
CDR2L
HID1
CYCS
JOSD1
GTPBP1
ADGRF1
COMT
TXNRD2
ZNF143
SEC22B
TXN2
LSM5
AVL9
UBE2L3
ATG101
TGM6
IMP4
CCDC115
MFSD8
ABHD18
SMIM41
HECTD1
WNK4
VPS25
RNF144B
ZNF589
CFAP20
ELFN2
C6orf89
MRPL45
FBXO28
OSGEPL1
PPIL1
ZCWPW2
AZI2
HIPK1
SMAD3
PARPBP
NUP37
IPO7
KLF16
PBX3
EXOSC10
UBE2D3
CISD2
TMEM222