ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1799525 | CD4+ T cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◣ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

PI4K2B
DTX2
GBA
KCNJ15
THEM4
MAMDC2
CAMK1D
DUSP6
ZWINT
GDPGP1
CIB1
SMCO1
PAXBP1
BCL9
ANXA2
NECTIN4
KLHDC9
GOLM2
ITGA4
STX6
HDAC7
SFT2D3
ITGAL
PUM1
SPATA13
SNX16
LIME1
SLC2A4RG
KRT2
FAM209A
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
THAP11
NUTF2
CENPT
FAIM
NOXO1
TBL3
RPS2
RNF151
YPEL3
TBX6
SF3A3
TNFAIP8
ZNF527
FNBP1
FRG1
PPIAL4F
PPIAL4E
PPIAL4D
SSBP1
FRG2C
NUF2
ZNF792
SORL1
ZNF540
ZNF571
VTA1
NMBR
TTLL12
CD69
DDX18
ZNF827
MRPL44
ZBTB20
GPR68
SYTL2
SKP2
LMBRD2
PSTPIP1
APBB1
ZNF226
RUNX2
ASB2
TEDC1
CRIP1
CRIP2
TNRC6B
DMAP1
NDUFS7
DCP1A
MYCBP2
STAG3
GPC2
HMGB1
USPL1
EXO5
TFPT
PRPF31
GMPS
FRG2
TMEM255A
PPIP5K2
PDP1
TDP2
ACOT13
DUX4
TNFAIP8L2-SCNM1
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
GLS
USP25
HNRNPD
ZNF550
ARHGAP15
COQ9
CIAPIN1
NME1
AP2B1
PEX12
ARHGAP9
MARS1
STX16
NAP1L3
FAM133A
F2RL3
FAM227B
DTWD1
NSUN6
ARL5B
ALG10B
COX16
GTF2H2
TEKT2
ADPRS
NTRK1
SH2D2A
CLUAP1
GTF2H2C_2
GTF2H2C
ST20-MTHFS
MED18
MINDY3
APOC3
APOA1
SATB1
CHMP5
BAG1
CCNT1
RPS7
TM9SF1
IPO4
TMEM39A
POGLUT1
SLC35E1
CARD6
RPL37
DCAF10
GATM
SPATA5L1
POLR3B
ARL4D
SNRPB
PSD4
KMT2A
PPM1M
SEC23B
SLC29A2
ZNF83
NOTCH2
IRAK2
ATP5F1B
PCYOX1
TIA1
MED23
ORC4
MBD5
GTPBP10
LY9
HECA
MDGA1
FRA10AC1
DCTN6
MBOAT4
CBWD5
NDST2
SUSD3
BRWD3
TMEM167B
ELOVL5
SARAF
LEPROTL1
MUC3A
CEP68
ORAI3
SETD1A
RAB18
PHB2
RPL27
IFI35
NAT10
EIF3E
TRAM1
NDUFB3
FAM126B
VPS29
RAD9B
VSX1
LIPA
NLRP1
MTF2
INTS12
GSTCD
TDRD9
ATP5MPL
ERCC5
TTC13
ARV1
ZNF791
ZNF490
MKLN1
METTL25
CCDC59
PEX3
ADAT2
PRRG2
NOSIP
TES
TOR1AIP2
TOR1AIP1
LCK
ADAP1
MANEA
MTERF4
NUP133
WWOX
PGBD4
EMC7
LSM8
P3H4
FKBP10
NUCB2
ADORA2A
ARID1B
CSK
SURF6
CTNNB1
SRPK2
PWP1
SMAD7
ZNFX1
RPL26L1
CBR4
FLI1
LSP1
SIRT6
ANKRD24
SSTR3
TNFRSF1B
STX18
C16orf54
GALK2
COPS2
CNIH1
RBBP5
FGFBP3
ZNF829
ZNF568
TATDN3
NSL1
ING4
RPS11
ZC3H12D
CBWD3
CBWD6
PGK1
SNX17
EIF2B4
ZNF513
NR4A3
PPIAL4H
PPIAL4G
SCP2
USP45
TSTD3
GABPA
ATP5PF
RAB5C
PTK2
EIF2D
MRPS23
MTMR9
SF3B1
GOSR1
DNAJC25-GNG10
DNAJC25
DGUOK
ING2
GTF2H3
EIF2B1
GPAM
MTA2
TUT1
GFM2
TPR
ODR4
HTT
CCAR2
C8orf58
SCAND1
CPEB4
TSGA10
C2orf15
ALG10
ZC3H15
ZNF408
ARHGAP1
PRRC2B
IL36A
PRKCE
RNF207
RPL22
TRMT6
MCM8
TMEM262
LDB1
ANXA2R
RPL29
NPAS4
ARHGEF3
ABLIM1
KLHL20
TMED2
ECSCR
SAMD4B
GMFG
EPS8
ZZZ3
ZNF696
GPR61
GNAI3
STOML2
FAM214B
PIGO
PSRC1
WDR36
VPS11
SUPT5H
RPS16
SNX5
MGME1
WDFY1
PFAS
CTC1
TPP2
CYP20A1
ZNF555
UBE2O
AANAT
SDHAF3
RPS24
POLR3A
BCL3
MRPL53
MOGS
GAA
SMG6
RSL24D1
UBA3
ARL6IP5
MRPL30
MITD1
DDX46
NUP214
SELPLG
SNRPD1
SS18L2
SEC22C
UBE4A
NKTR
RHOG
MRPS18C
HELQ
STAT1
DND1
WDR55
TTC32
MFSD8
ABHD18
MED4
STARD6
C18orf54
ATG5
WBP1
INO80B
POLG2
DDX5
CEP95
MRPS16
MRPS31
DNAJC9
FAM228B
TMEM222
TP53I3
SF3B6
FBXW7
NOC4L
DDX51
ATR
RMDN1
CPNE3
TLR6
BTRC
LRRN3
MFF
COL23A1
TAF12
PACSIN2
EXOSC9
IL2RB
SP140L
RALBP1
RPS15
RAB5A
EFHB
AOPEP
SLC33A1
TBC1D10A
DGKA
PYM1
SPRYD4
CD2
BUD13
LEFTY1
ARAP1
PPP6C
SLC2A8
MAP3K7CL
CCT8
CEP85L
C1orf74
MTRNR2L1
HAX1
ZNF44
KDM7A
PPP4R3B
TADA1
EIF3F
SNAP47
ARHGAP45
JMJD4
IFIT3
LNPEP
RANBP3
NOTCH1
SLC25A51
XPC
LSM3
ARHGEF12
USP4
PCNA
TMEM230
RRM1
KANSL1
MTIF3
ZMPSTE24
TMCO2
THOC3
RAB43
PSMF1
PPME1
C2CD3
ZNF581
BIRC3
ZNF580
TMEM87A
GANC
C10orf88
LCP1
FKBP1A
CDK11B
CDK11A
ZNF846
TRNAU1AP
C12orf40
ABCD2
ZFPL1
CDCA5
CAMK2D
ERMARD
RETSAT
ELMOD3
CCDC200
EXOC5
AP5M1
PRKAG1
NDUFA12
WDR76
MFAP1
ARF6
KRTAP17-1
KRTAP29-1
KRTAP16-1
HILPDA
SELENON
KIAA1191
ARL10
RGL2
PFDN6
EXOSC6
SLAMF1
TIMM23
PUM3
NUGGC
ELP3
GNAL
CLCC1
CHMP1B
RAD54L2
TMEM68
TGS1
MRPL21
IGHMBP2
PSMD3
KCTD5
RGCC
WIPF1
ZNF3
TMEM242
ACAA2
EIF1AD
CST6
BANF1
COPS6
PSMB7
GRIN1
CD2BP2
PXN
SUGT1
MAP1LC3B2
UBA52
PIK3R1
MLEC
SECISBP2L
TESPA1
CAP1
ZNF501
NSMAF
CRADD
FITM2
KISS1R
R3HDM4
SLC28A2
RPS20
MED31
C17orf100
NDUFB6
TNFRSF10A
UBE2F
SAP30
RABGAP1L
PRPF18
BRIX1
HBS1L
ZC3H3
IL16
ADPGK
PA2G4
GPR65
WDR74
STX5
ARID1A
RPS12
BCL9L
TRIP4
PCLAF
UBAP1
GRAMD4
HERPUD2
ACTR6
RESF1
NR2C1
SNRPC
TBC1D19
FYN
WWP2
NOB1
RPL39L
THUMPD3
SLC44A1
PTPN4
GNG14
DHPS
ICAM2
FAM167B
MGAT1
ZNF567
UTP23
MTPN
LUZP6
DPYD
OSBPL7
LRRC46
SCRN2
EDEM1
YIPF5
KCTD16
ZNF821
CANT1
COPS4
RPS13
PHKB
ITFG1
ARHGDIB
SPDL1
ACOX3
TRMT44
NFAT5
NDUFAB1
WDR43
ZDHHC18
THAP9
SEC31A
WASHC2C
CDK5RAP1
NUP107
UFL1
RCC1
PKN2
RMND1
ARMT1
WDR70
NUP155
TMEM116
ERP29
RNF138
S100P
UNC50
COA5
LAX1
UBL7
RIC8A
BET1L
RPS29
VWA8
OXA1L
RGS1
PTGER2
PPP1R11
POLR1H
RNF39
PLEKHF1
WDR4
GSPT1
SPTLC1
ZNF562
FAM207A
INTS4
LMAN2
RGS14
EGR2
ATXN7L3B
ZNF318
PAFAH2
MAD1L1
METTL18
C1orf112
PYGO2
PBXIP1
LOC101928120
RER1
MORN1
XRCC2
RFX7
DHX16
TEX9
NARS1
OCIAD1
PPP1R18
NRM
COX6A1
CELF2
MFAP5
PIH1D1
ALDH16A1
UTP25
ENO1
STRADA
DFFB
CEP104
SLC7A6OS
PRMT7
PLCXD2
TTI2
ITPRIP
FNDC7
PARP6
SKIV2L
NELFE
FADD
NSUN4
BACH1
ASXL2
SGO1
BRF2
TTYH2
RPL38
NDUFB8
HIF1AN
ARPC2
ZNF668
ZNF646
ADH5
BCDIN3D
EPRS1
HNRNPA1L2
ZBTB2
ADAR
LBH
GRWD1
KCNJ14
STK17B
RTF2
PHF21A
PDE8A
RSPH14
RAB36
RANBP2
UBR4
NDUFS2
ADAMTS4
ARHGEF6
EVI2B
EVI2A
BACH2
TIMM9
KIAA0586
LSM5
AVL9
THNSL2
ACTR3
AGGF1
SMIM26
DRG2
ATP1B3
BBS2
RUVBL1
PSMD6
CWC25
PRKRIP1
PARP8
TMEM186
PMM2
GPR171
RAPGEF6
RALGAPB
ETFBKMT
AP3B1
MTRES1
C18orf25
FAF2
DOK2
XPO7
MRPL19
TRMT61B
AQR
TIMM23B
PARG
PDE4A
LSG1
ZNF207
C17orf75
NOXA1
MTFP1
ZNF805
AURKC
PTPN22
CHERP
DBNDD2
ZNF286A
PLEC
TMEM109
PRPF19
NDUFS1
EEF1B2
MRPL20
LRRC37A3
CASP8
CCNL2
LDLR
MRPL52
MMP14
SLC7A7
EIF1B
MAL
SUN2
YBEY
MCM3AP
EIF2B3
FLT3LG
SYAP1
CTPS2
PDCD2
VIRMA
GPD1L
EID2
EID2B
TERF2
ZBTB22
TAPBP
DAXX
SMIM40
POLR2H
CLCN2
GZF1
PPIH
KIF21B
ITPKB
TMEM259
CNN2
ABCA7
POLR2J3
ZCCHC4
TSFM
ZCCHC8
CCDC69
TTC28
SLA
RAB37
TRUB2
COQ4
RAD52
SNUPN
RAB8B
MOB4
SLTM
ASNSD1
ASDURF
POLR1F
GSTT4
CABIN1
C3AR1
EIF2B2
U2SURP
HUS1
ZNF879
PSMG1
SYTL3
DYNLT1
ANAPC10
ABCE1
ZNF773
POLD1
NR1H2
PPP1R16B
ATAD1
SYT11
GON4L
GORASP2
GGNBP2
CALR
RAD23A
TMEM41A
CRBN
SLC30A6
SEPTIN9
EIF3D
THAP12
GVQW3
KIFAP3
ACTRT3
CPPED1
MYNN
ATP5MC3
SLC38A2
PIK3R4
BRAP
ACAD10
TTLL5
ERG28
ZFYVE16
DDX19A
RWDD1
ZNF302
VPS72
PIP5K1A
SEH1L
TM9SF2
ARHGEF1
CRLF3
ATAD5
CD79A
DSE
TMEM30A
TSPYL1
SNX11
CBX1
RTCA
TMEM248
CWF19L2
CMTR1
FMNL1
NDUFB5
MRPL47
SYPL1
COX7C
GLO1
CASC3
TRMT2A
RANBP1
RPS3A
MRPS35
ZBTB43
TM2D3
METTL3
SMARCC1
RUNX1
ZNF91
MAPKBP1
CCDC102B
TMX3
ZNF784
TNFAIP8L1
KDM8
DDX23
ITCH
GTF2B
MTERF1
RAP2C
USO1
CSNK1A1
POLE4
SCMH1
USP30
YTHDF2
TNFRSF14
INO80D
IRF2BPL
SRP19
CCDC86
GIMAP1-GIMAP5
GIMAP1
CPT2
TFAM
CHIC2
FAM98A
RGL4
RNF139
POLR2K
SPAG1
FBXO43
FAF1
CDKN2C
SRSF11
SNU13
CMC2
CENPN
XRRA1
SPCS2
CIPC
CUL5
MMADHC
SSNA1
ANAPC2
PARN
BFAR
URM1
SNRPB2
CD55
LMNA
TMTC3
CEP290
PTPN23
DSN1
CLECL1
MAP3K7
PIGF
CRIPT
SPN
NSFL1C
IARS2
BPNT1
MGAT5
EIF2S1
ATP6V1D
RBM7
C11orf71
CHPF2
ABCF2-H2BE1
ABCF2
RIC1
POMP
DNAJB9
ISG20
THAP5
AEN
ERGIC3
FAM133B
SNRPE
PRKAB1
LGALS8
MZF1
IL17RA
GNE
TTC1
DCAF1
TTC5