ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX12813814 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◣ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MAMDC2
LOC102724770
DGCR6
FRG2C
ARL4D
CCDC200
FRG2
WDR74
STX5
DUX4
MUC3A
SNX16
PI4K2B
KRBA1
COL23A1
KCNJ15
RTEL1
SMCO1
ART1
RUNDC3B
THEM4
MTRNR2L1
FAM209A
SGPP1
WDR33
EIF4A3
PDP1
FAM193B
EXOC6
TPTEP2-CSNK1E
SMARCD2
ATP5F1B
COX6A1
ADAM21
PTGER2
LMLN
IQCG
MAPK11
DIO2
SERPINA3
OBSCN
YBEY
MCM3AP
LRPAP1
MKLN1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
TIMELESS
OSGIN1
PHRF1
C3orf14
TTC7B
STMN3
ZNF550
SPATA33
MUC1
CNIH1
ST6GALNAC6
ZNF217
TMEM242
RGS21
MON2
USP17L21
USP17L20
USP17L12
USP17L22
KMT2A
GLRA1
SAMD7
BTN3A3
ZBTB8B
DMXL2
CROT
PUS7
RINT1
CLIC3
ZWINT
CYP2C9
NARS2
SCTR
ZFP37
PPM1D
PRRT1B
EIF2AK2
LMTK2
ANP32D
TBC1D22A
ZNF285
LINGO1
RBPJ
LONRF2
DDX59
THUMPD1
ARHGAP39
LAMB2
PSMD6
CNGA1
CDT1
APRT
SCCPDH
LEP
RGS18
EDF1
CEACAM21
NUDT4B
NUDT4
ZNF527
PIP
ZNF341
SAP130
ASNS
MID2
GTPBP4
TTLL12
PDCD7
DUXB
ZNF24
CYB561D1
ATXN7L2
ST20-MTHFS
LDHD
DCTN6
MBOAT4
CLK4
XXYLT1
ACAA2
GSTM1
PRDX6
CIPC
KIF22
ZG16
MTRF1
ZMYND8
SMPD2
PPIL6
IGFALS
GIMAP4
COMT
TXNRD2
STX16
GSTM5
ZNF317
ZNF433
PPP2R3A
MANEA
FOXK1
CACNG1
KIF12
TTC28
SFXN5
NOTCH3
C2orf66
FKBP9
DRAP1
C11orf68
LPIN2
PLCG1
FGD3
SLC26A4
ELK4
DIP2B
RXRA
MYO5A
ARFGEF2
HEATR6
TSKU
TRIM37
RANBP17
SERPINB5
NOX5
CHD1L
SSH3
OR13C8
SUMO3
CRP
MRPS33
HAUS5
OVOL1
AP5B1
B4GALNT3
VPS37C
SRPK2
HIPK1
TLE7
INTS5
GANAB
CPA2
PSMD4
IL21R
NRARP
ZNF143
SCGB1C2
SCGB1C1
ODF3
APOD
ATXN7L1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PPP1R9A
HES1
IRAK2
CTAG1B
CTAG1A
ITGB1BP1
CPSF3
PIK3C2B
BANP
PFDN4
FBXO8
CEP44
EBAG9
FAM91A1
DIP2A
ZNF594
CRB1
ZNF641
USP8
EFCAB10
SLC28A2
ZNF623
CDYL
SYPL1
AQP11
MAN1A2
BMP7
DEGS2
MAD1L1
RPS6KB2
NUDT1
MRM2
SH2D3C
CARNS1
CDK9
FAM227B
DTWD1
POLR2J3
ZNF76
ZNF282
ACP6
HTR7
RASSF5
MAP3K2
BCAS4
SERTAD3
SERTAD1
POU2F1
LIMS2
PARP16
CUL1
KLHL22
ZNF592
C20orf204
ZNF572
PPP1CA
TBC1D10C
RAD9A
EIF2D
MUC12
USP32
MIS18BP1
OSBPL8
CCL24
C2orf88
METTL3
NRAS
PRMT6
FANCC
RUFY1
ZSCAN31
CPPED1
PRELID3A
LTC4S
MGAT4B
SULF2
TRH
CAMK1D
L3HYPDH
JKAMP
CYP24A1
TRANK1
ADSS1
PRKAR2B
UBE2T
NBN
RAC1
RPIA
NEDD9
BCAP29
LUC7L2
FMC1-LUC7L2
FMC1
GTDC1
SLC39A13
TMEM41A
SKP2
LMBRD2
PRELID3B
DHX40
RNFT1
RASEF
PAWR
TBX2
PRSS38
B3GALT2
ELOVL2
RAB37
C1orf53
LHX9
WDR72
HRNR
SLC44A1
SMG8
ACAP2
CASD1
FEM1B
TDRD5
TOMM20L
NR5A2
TMOD3
GJD3
FXYD4
TSPAN5
SEL1L
WDR31
BSPRY
CAPN7
MAGEF1
COASY
HSD17B1
NRCAM
PAXIP1
SMYD3
BRSK2
DBNDD2
TATDN2
F2RL3
YPEL3
TBX6
ZNF436
ZNFX1
AADACL4
CYB5R4
ZNHIT6
UBE2F
MSH3
DHFR
CPT2
BSDC1
ZNF708
MTRNR2L2
UQCRC1
TMEM89
MTRNR2L8
ZNF562
SLC30A7
EXTL2
ITGB3BP
EFCAB7
EIF4EBP1
DUSP6
METTL8
ZSCAN32
ZNF174
PER3
DCAF17
TEAD2
DKKL1
ZSCAN30
SNCG
MMRN2
BPIFB3
GBA
NT5C3A
GLT6D1
RHOT1
FAM153B
ZNF3
TTLL1
GORASP2
PDE11A
FAM184A
IER3IP1
CDCA7
ZNF134
SARS2
MRPS12
HACD2
ELAC1
ZNF792
COQ9
CIAPIN1
ZNF555
PEX7
ZBTB26
RABGAP1
GRAMD4
PADI4
SNX11
CBX1
TMEM229B
BTBD8
PPIG
FAM234B
FEM1C
MAP3K4
NUF2
B4GALNT4
APOC3
APOA1
COL18A1
SLC27A5
LGALS12
GPR35
AFAP1
BCAR3
CD2
PAXBP1
PLAAT5
RBBP5
APOBEC3B
MTF2
ZNF426
KAT6B
ZNF30
RPS7
TLR2
SNX20
BCR
FGL2
ZNF514
ZNF324B
ZNF117
VPS13D
SSBP1
ZNF761
PDE4DIP
DMAP1
IFI6
AURKAIP1
OR4K17
MRPS16
RPL39L
SAMD4B
GMFG
MINDY3
ZNF132
GPRC5C
TEDC1
CRIP1
ACY3
SF3A3
PXDNL
NEMF
TACC1
PUM1
CRIP2
ACYP2
FAAH
RFC1
ZNF613
LBP
MED23
MYH2
SHISAL2B
MROH7
DTX2
NDUFS7
UBE2D3
C4B_2
C4B
CEP85
CISD2
ZNF627
IL22RA2
INKA2
DDX20
IQGAP1
ZNF165
ADCY10
TYW3
CRYZ
PTPRN2
BAAT
C10orf143
NME1
SDR42E1
ST3GAL5
SLC1A7
COX16
MAPRE2
TMEM70
RPS29
DCP1A
CCDC130
IL36A
PEX3
ADAT2
MDM4
RPL27
SEM1
GPD1L
AKR7A3
DNAJC25-GNG10
DNAJC25
RABGAP1L
INTS12
GSTCD
LMLN2
CEP72
LOC110384692
C4A
YY1AP1
DAP3
YWHAQ
ZNF83
YJU2
SATB1
CALCB
GALNT1
JMJD1C
IFI35
ZMPSTE24
FRA10AC1
ELOC
PLEC
DCAF10
RBM33
IFT88
TMEM262
CYP17A1
SELENBP1
BAX
MRPL44
PNMA3
ACOX3
NUDT15
FASTKD1
NKX1-1
SNAP47
GDPGP1
CIB1
POLE4
LCN15
METTL7A
SULT1C3
ZNF577
PRAMEF1
HMGB1
NDUFB3
FAM126B
EAPP
NOS3
DSTYK
POLD1
TTC32
CYC1
FDX1
ZBTB44
SAMD14
NPAS4
ZNF662
NARF
CALD1
USPL1
GJC3
MRPL55
TTC30B
GPAA1
BRF2
C19orf18
HERPUD2
TDP2
ACOT13
STX18
C2orf69
CHST3
TMEM43
CHCHD4
TBC1D19
NOTCH2
TRIP4
PCLAF
TMCO2
LCN8
ZFP30
GTF2H2
PNPLA7
MRPL41
SELENOH
TCF25
PROKR2
SLC41A3
CFHR4
TOP3B
SLC24A1
TRMT44
APOL4
CARD6
ZNF440
ZNF501
DPY19L4
ENG
ZNF226
TMEM14C
ATP1A1
ZNF491
MYOG
MOB3A
IZUMO4
RPL37
CHMP7
TNXB
DRG2
PRKACB
SPATA13
TMEM106C
NXPE4
RERE
KIF5C
RSF1
AAMDC
ZNF443
FRMPD4
TOR1AIP2
TOR1AIP1
COMMD2
PIK3R1
SRPRB
EXOC3
ADCY3
COQ8A
ZNF487
TMPRSS12
ADI1
SLC33A1
ABLIM2
TM9SF1
PAFAH2
RBBP9
FN3K
NSFL1C
EXOSC4
C1orf159
TMEM62
CYBC1
TARS2
LIPA
PSMD8
MRPS31
ARHGAP45
ZNF614
PSEN1
ZNF561
RSU1
POLR3B
PPIP5K2
FAIM
FKBP5
TFPT
PRPF31
TTC26
RTP5
RPS14
CXCR2
ACER2
ZNF878
NME4
DECR2
GSTA4
METTL25
CCDC59
TRIP11
ZNF408
ARHGAP1
ALG10B
PPP1R11
SPACA3
PCYOX1
GALK2
LCN6
YTHDC2
TATDN3
NSL1
SEC22B
KDM3A
CLDN16
ANGEL2
REEP3
UTP3
CYP4F22
TAS2R39
SEMA3D
ACBD6
ZSCAN29
TUBGCP4
SFT2D3
SLC25A51
ZKSCAN3
DNAJB12
CAT
GTF3C3
GCNT3
FRG1
IPO4
BAIAP2
VARS2
GTF2H4
THAP11
LOC100289561
TIGD2
EIF3L
ANKRD54
ZNF556
RAD54L2
PAIP2B
EIF3F
MLLT1
BAG3
VTA1
NMBR
ZER1
TMEM68
TGS1
GOLM2
EPS8
IFNAR2
PLA2G1B
ZNF391
ZNF280A
ZKSCAN7
CATIP
ATF7IP2
NRBP2
TMCC3
AUH
NUTF2
CENPT
TM9SF2
LSG1
GTF2H2C_2
GTF2H2C
SUPT7L
SLC4A1AP
CD209
PARP15
REXO4
ADAMTS13
INO80C
WDR36
TBC1D13
RUVBL1
SLC2A7
PRIM1
TESK2
MMACHC
KIAA1549
SNIP1
POM121
DNALI1
NBPF1
ACTL8
ZNF32
FGFBP3
MRPL40
HIRA
FBXO31
GLO1
HLA-E
MYL12A
ACTRT3
HTR5A
ZNF222
BORCS7
RPGRIP1L
FTO
COLEC11
POLR1H
RPL11
CLPP
STAT3
ITGA4
DCLRE1B
AP4B1
TMEM44
EIF1AD
CST6
BANF1
RMND5A
LRIG2
STAT1
MTERF4
MACC1
RTTN
ZNF350
SAR1B
PARK7
FAM207A
PPP6R1
TEX46
KDM1A
HSD17B6
MTERF1
TEFM
PDCD2
PLA2G4E
MSRA
BMS1
RILP
ZNF841
CDK5RAP1
TACO1
GINS1
RNF187
L2HGDH
DMAC2L
ZNF829
ZNF568
CCNT1
TTC13
ARV1
JMJD4
KRTAP10-7
SRRM3
SLC9A1
SCMH1
ANK3
EPB41L2
SNX17
EIF2B4
ZNF891
ZNF10
SCAND1
ZC3HAV1
PRIM2
PSMF1
ESR2
ETFBKMT
TXNL4B
DHX38
TMCC1
ATR
USP30
ORC5
ZBTB45
GBP4
THOC5
PDE6D
COPS7B
ORC4
MBD5
ZNF582
POLR3E
NPR1
ILF2
NCKAP1L
CCSER2
REN
DEK
PRRC2B
MRPL21
IGHMBP2
CREBL2
PHGDH
TMEM161A
TTYH2
MRPL20
ZNF394
SMIM12
SGCE
PEG10
SLC29A2
RAB30
CCDC97
TRUB2
COQ4
CANT1
NCOA7
WDR11
ABL1
FAM228B
GTF3C5
ZNF772
TNFRSF1B
TMEM222
CYP46A1
TAF12
PDS5B
MOB4
LARP1
PHB
MTRNR2L9
CTSV
ATP5MC2
KANSL3
FER1L5
ZNF502
SETDB1
LPIN1
SUPT6H
SDF2
BACH2
ZNF540
KRTAP10-8
RALBP1
DUS1L
ZBTB40
NECTIN4
FBXL12
SMAD1
TXN2
SCAF11
HLA-C
CD47
ATF7IP
CCDC150
EML5
MCF2L2
TP53I3
SF3B6
MRPL1
ZNF513
C1orf167
OTUD7A
MRPS18C
HELQ
FAM133B
ADNP
TNFAIP8L2-SCNM1
TNFAIP8L2
ZNF571
MTA2
DNM1L
LY6L
HYAL1
B3GNTL1
TMED9
GAS2L3
FRRS1
ZNF207
C17orf75
OAZ3
LSS
HSPE1-MOB4
HSPE1
HSPD1
WDR43
AKAP10
SMIM31
SAMD4A
RMND1
ARMT1
B4GALT7
CLTB
DPP9
KLHL20
BNIP1
C1GALT1C1L
SPAAR
HRCT1
MRPS23
KRTAP10-9
C16orf54
CD14
IST1
LGR5
MTIF2
PCP4L1
TUT1
TMOD4
SCNM1
RAX2
LYSMD1
GASK1A
ZNF557
NUP54
GTPBP3
ANO8
ZNF441
COPS4
PDCD6IP
ZNF263
MMP7
MIPOL1
GFM2
KIF2C
PGAP6
ERV3-1-ZNF117
ERV3-1
N4BP2L1
ZNF611
BRWD1
PLEKHM3
ATP9B