ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX17826861 | 293
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◣ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MAMDC2
COL23A1
MSH3
DHFR
MTRNR2L2
MTRNR2L1
DUX4
FRG2C
MTRNR2L8
MUC3A
LOC102724770
DGCR6
ARL4D
FRG2
WDR74
STX5
AFAP1
MTRNR2L9
TMEM242
SNX16
CCDC200
EPN1
ITGB3BP
EFCAB7
ADGRA1
DCP1A
PHRF1
TRIM48
DRD4
PEX3
ADAT2
PTPRN2
KIF5C
NME1
GBA
TEX19
SNAP47
JMJD4
CYP4F11
NDUFS7
TMEM101
ZSCAN22
LY6L
DRG2
POLR2J3
PDE6D
COPS7B
WDR11
BTNL9
GOLGA3
BRWD1
EIF2D
MRPS31
RPEL1
SMARCD2
TOP3B
INTS12
GSTCD
TXNIP
STX16
UTP3
NR1H3
ACP2
KMT2A
SNRPD3
GUCD1
PAXBP1
PRPSAP1
RBBP5
COL6A2
CASC3
METTL9
POLD1
CCDC97
NR1H2
HEMK1
C3orf18
DSTYK
TOR1AIP2
TOR1AIP1
RNF187
MED23
GOSR2
SMG8
STAT3
FXN
MRPL39
INO80C
ZNF76
ATF4
SLC39A3
RBM28
RRP15
CCNG2
LINGO1
RPS7
PSMF1
SPATC1L
HMGB1
USPL1
TATDN3
NSL1
MRPL48
GFI1B
ARHGEF1
TSC1
CD79A
TSNAX
ZNF335
SELENOW
MAPK11
UBB
SF3A3
MTERF4
MPHOSPH10
MCEE
TEFM
NCBP3
WASHC1
NUF2
CLTC
GTF2H2
TVP23B
TMA16
THEM4
SSBP1
ZNF561
SNRPD1
UBE3B
KCTD10
PRPF18
NUDCD3
HEXIM1
UBC
NKAP
MRPL44
SLC33A1
DPEP2NB
PTPN21
DUS2
DDX28
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TRIP4
PCLAF
DRAP1
C11orf68
TAF3
NOP16
HIGD2A
LMAN2
RGS14
STX18
ZNF408
ARHGAP1
CYB561D1
ATXN7L2
NVL
SMG7
RTTN
TTC4
ALKBH3
NUP54
ARID2
WNK4
VPS25
TM9SF1
IPO4
MRPL40
HIRA
SLC27A5
NSFL1C
SNX17
EIF2B4
ZBTB45
ZNF513
FRA10AC1
RTEL1
STMN3
PSMB7
ZMPSTE24
TACO1
RBL1
TAOK3
ZBTB17
ZNF839
PLXNA1
SUDS3
GTF3C5
C18orf21
TIMM22
TIGD1
EIF4E2
PPIP5K2
FRG1
RTN3
ATL3
GIT2
ANKRD13A
RNF121
LOC100133315
RFXANK
BORCS8-MEF2B
BORCS8
PIGL
NCOR1
KAT6A
TTC26
FAM180B
ZCCHC4
NDUFS3
KBTBD4
TDG
C12orf73
KCTD5
FAM187A
EFTUD2
CCDC103
MTF2
EIF1AD
CST6
BANF1
UQCC1
DHX40
PREPL
CAMKMT
FAM207A
DDX46
YARS1
S100PBP
VPS33A
DMAP1
TMEM262
DNAJB12
TRDMT1
BMS1
HUS1
HNRNPA1L2
VPS45
PAFAH2
REXO4
ADAMTS13
TBC1D13
MRPS23
MAN2C1
DPY19L4
EIF3F
ZNF358
MCOLN1
PPP6R1
PCDH9
NDUFB3
FAM126B
TEX46
KDM1A
TRUB2
COQ4
MRPL16
VPS13B
CGGBP1
C3orf38
UBQLN1
BANP
SEC13
PRRG2
NOSIP
MRPL58
TOMM22
CDK5RAP1
FBXO22
MTIF2
KCNIP2
SLC39A6
ELP2
HINT3
DCAF10
ATR
EIF2B3
SF3A1
CCDC157
BICD2
HSPE1-MOB4
HSPE1
HSPD1
STMP1
EDC4
DPP9
CCNC
COX16
ZBTB40
AGK
ZSCAN12
TARS2
LTN1
DUS1L
GTF2H2C_2
GTF2H2C
LRRC59
PPP5D1
CALM3
PI4K2B
KCNJ15
ZWINT
SMYD3
ZNF550
BRSK2
LDHD
OBSCN
MKLN1
KRBA1
ST20-MTHFS
SMCO1
DBNDD2
FAM209A
TSKU
ATP5F1B
WDR33
TATDN2
F2RL3
YPEL3
TBX6
ZNF436
ZNFX1
PDP1
AADACL4
CYB5R4
ZNHIT6
UBE2F
COX6A1
EIF4A3
CPT2
BSDC1
THUMPD1
ZNF708
SLC28A2
DCTN6
UQCRC1
MBOAT4
IRAK2
TMEM89
ZBTB8B
ZNF562
SLC30A7
EXTL2
ZNF433
ZSCAN31
EIF4EBP1
DUSP6
ZNF527
METTL8
DEGS2
ZSCAN32
ZNF174
PER3
DCAF17
TEAD2
DKKL1
GTPBP4
DIP2B
MID2
ZSCAN30
SNCG
MMRN2
TBC1D22A
FGD3
BPIFB3
NT5C3A
GLT6D1
MANEA
RHOT1
LMLN
IQCG
FAM153B
ZNF3
TTLL1
GORASP2
CTAG1B
CTAG1A
PDE11A
FAM184A
IER3IP1
CNGA1
CDCA7
ZNF134
SARS2
MRPS12
COMT
HACD2
ELAC1
ZNF792
PTGER2
SUMO3
COQ9
CIAPIN1
ZNF24
ZNF555
PEX7
RGS18
ZBTB26
RABGAP1
FAM227B
DTWD1
TXNRD2
PRDX6
GRAMD4
TTC7B
PADI4
SNX11
CBX1
TMEM229B
BTBD8
ZNF572
CCL24
PPIG
FAM234B
FEM1C
MAP3K4
B4GALNT4
FAM193B
APOC3
APOA1
CRP
SPATA33
COL18A1
LGALS12
GPR35
ZNF341
ADAM21
BCAR3
C2orf66
CD2
PLAAT5
ARHGAP39
APOBEC3B
ZNF143
ZNF426
KAT6B
ZNF30
TLR2
SNX20
SAP130
BCR
FGL2
ZNF514
ZNF324B
RGS21
LEP
ZNF117
VPS13D
TSPAN5
ZNF761
NOX5
PDE4DIP
PRRT1B
IFI6
AURKAIP1
PIP
NARS2
OR4K17
MRPS16
MON2
LUC7L2
IL21R
FMC1-LUC7L2
FMC1
RPL39L
SAMD4B
GMFG
MINDY3
C2orf88
PRSS38
EDF1
ZNF132
CYP2C9
GPRC5C
TEDC1
CRIP1
ACY3
GSTM5
PXDNL
NEMF
TACC1
PUM1
EXOC6
CRIP2
ACYP2
SCCPDH
FAAH
ANP32D
RFC1
ZNF613
LBP
MYH2
SHISAL2B
MROH7
DTX2
ART1
ST6GALNAC6
UBE2D3
C4B_2
C4B
CEP85
RBPJ
ACP6
CISD2
ZNF627
IL22RA2
INKA2
DDX20
DMXL2
IQGAP1
ZNF165
ADCY10
LMTK2
TYW3
CRYZ
ACAA2
CLIC3
BAAT
C10orf143
SDR42E1
ST3GAL5
CHD1L
SLC1A7
IGFALS
TTLL12
DIP2A
MAPRE2
TMEM70
RPS29
CCDC130
IL36A
MDM4
TMEM41A
RPL27
RAB37
SEM1
GPD1L
AKR7A3
DNAJC25-GNG10
DNAJC25
RABGAP1L
LMLN2
B4GALNT3
CEP72
LOC110384692
C4A
YY1AP1
DAP3
YWHAQ
ZNF83
ZNF623
YJU2
SATB1
CALCB
GALNT1
JMJD1C
IFI35
ELOC
PLEC
RBM33
IFT88
CYP17A1
SELENBP1
BAX
SGPP1
PNMA3
ACOX3
NUDT15
FASTKD1
SAMD7
NKX1-1
GDPGP1
CIB1
POLE4
MRPS33
LCN15
METTL7A
SULT1C3
ZNF577
PRAMEF1
EAPP
NOS3
TTC32
CYC1
FDX1
ZBTB44
SAMD14
NPAS4
ZNF662
NARF
CALD1
ZNF317
ZNF594
GJC3
SKP2
LMBRD2
MRPL55
TTC30B
GPAA1
BRF2
C19orf18
HERPUD2
POU2F1
TDP2
ACOT13
C2orf69
CHST3
TMEM43
CHCHD4
TBC1D19
GLRA1
SCGB1C2
SCGB1C1
NOTCH2
HAUS5
TMCO2
LCN8
ZFP30
PPP2R3A
CLK4
PNPLA7
MRPL41
SELENOH
TCF25
PROKR2
SLC41A3
CFHR4
SLC24A1
TRMT44
APOL4
CARD6
NRARP
ZNF440
ZNF501
ENG
PRELID3B
ZNF226
TMEM14C
BTN3A3
ATP1A1
ZNF491
MYOG
MOB3A
IZUMO4
RPL37
CHMP7
TNXB
PRKACB
SPATA13
TMEM106C
NXPE4
RERE
RSF1
AAMDC
ZNF443
FRMPD4
ODF3
COMMD2
PIK3R1
SRPRB
EXOC3
ADCY3
COQ8A
ZNF487
TMPRSS12
ADI1
ABLIM2
FEM1B
FKBP9
RBBP9
FN3K
EXOSC4
C1orf159
TMEM62
CYBC1
LIPA
PSMD8
ARHGAP45
ZNF614
PSEN1
GTDC1
RSU1
POLR3B
FAIM
FKBP5
TFPT
PRPF31
RTP5
RPS14
CXCR2
CEACAM21
ACER2
ZNF878
NME4
DECR2
GSTA4
METTL25
CCDC59
TRIP11
ALG10B
PPP1R11
SPACA3
PCYOX1
GALK2
LCN6
YTHDC2
SEC22B
KDM3A
CLDN16
ANGEL2
REEP3
CYP4F22
PDCD7
TAS2R39
SEMA3D
ACBD6
ZSCAN29
TUBGCP4
SFT2D3
SLC44A1
SLC25A51
ZKSCAN3
GIMAP4
CAT
MAD1L1
GTF3C3
GCNT3
BAIAP2
VARS2
GTF2H4
THAP11
LOC100289561
TIGD2
EIF3L
ANKRD54
ZNF556
RAD54L2
PAIP2B
MLLT1
BAG3
INTS5
GANAB
VTA1
NMBR
RPIA
ZER1
TMEM68
TGS1
GOLM2
EPS8
IFNAR2
PLA2G1B
ZNF391
ZNF280A
ZKSCAN7
CATIP
VPS37C
ATF7IP2
NRBP2
TMCC3
AUH
TIMELESS
NUTF2
CENPT
TM9SF2
LSG1
SUPT7L
SLC4A1AP
CD209
PARP15
WDR36
RUVBL1
SLC2A7
PRIM1
TESK2
MMACHC
KIAA1549
SNIP1
POM121
DNALI1
NBPF1
ACTL8
ZNF32
FGFBP3
LRPAP1
FBXO31
DIO2
GLO1
HLA-E
MYL12A
ACTRT3
HTR5A
ZNF222
BORCS7
RPGRIP1L
FTO
COLEC11
POLR1H
RPL11
CLPP
ITGA4
DCLRE1B
AP4B1
TMEM44
CAMK1D
RMND5A
LRIG2
STAT1
MACC1
ZNF285
ZNF350
SAR1B
PARK7
HSD17B6
MTERF1
PDCD2
EFCAB10
PLA2G4E
MSRA
RILP
ZNF841
C3orf14
GINS1
L2HGDH
DMAC2L
ZNF829
ZNF568
CCNT1
TTC13
ARV1
KRTAP10-7
SRRM3
SLC9A1
SCMH1
ANK3
MAP3K2
EPB41L2
ZNF891
ZNF10
SCAND1
ZC3HAV1
PRIM2
ESR2
ETFBKMT
TXNL4B
DHX38
TMCC1
USP30
ORC5
GBP4
THOC5
ORC4
MBD5
ZNF582
NBN
POLR3E
NPR1
ILF2
NCKAP1L
CCSER2
REN
DEK
PRRC2B
MRPL21
IGHMBP2
CREBL2
PHGDH
TMEM161A
TTYH2
MRPL20
ZNF394
SMIM12
SGCE
PEG10
SLC29A2
RAB30
CANT1
NCOA7
ABL1
FAM228B
ZNF772
TNFRSF1B
TMEM222
CYP46A1
TAF12
PDS5B
MOB4
LARP1
PHB
CTSV
ATP5MC2
KANSL3
FER1L5
ZNF502
SETDB1
LPIN1
SUPT6H
SDF2
BACH2
ZNF540
KRTAP10-8
RALBP1
CIPC
NECTIN4
FBXL12
SMAD1
TXN2
SCAF11
HLA-C
CD47
ATF7IP
CCDC150
EML5
MCF2L2
TP53I3
SF3B6
MRPL1
C1orf167
OTUD7A
MRPS18C
HELQ
FAM133B
ADNP
TNFAIP8L2-SCNM1
TNFAIP8L2
ZNF571
MTA2
DNM1L
HYAL1
B3GNTL1
TMED9
GAS2L3
FRRS1
ZNF207
C17orf75
OAZ3
LSS
WDR43
PRKAR2B
AKAP10
SMIM31
SAMD4A
RMND1
ARMT1
B4GALT7
CLTB
KLHL20
BNIP1
C1GALT1C1L
SPAAR
HRCT1
KRTAP10-9
C16orf54
CPPED1
CD14
IST1
LGR5
PCP4L1
TUT1
TMOD4
SCNM1
RAX2
LYSMD1
GASK1A
ZNF557
GTPBP3
ANO8
ZNF441
COPS4
PDCD6IP
ZNF263
MMP7
MIPOL1
GFM2
KIF2C
PGAP6
ERV3-1-ZNF117
ERV3-1
N4BP2L1
ZNF611
PLEKHM3
ATP9B
NFE2L3
TNFAIP8
NDUFV1
GABPB2
GOLGA5
ZNF300
DUSP16
DND1
AGL
BDH1
ZNF609
HACL1
BTD
UGT1A10
WDR55
STAU1