ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3474299 | LNCAP
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◣ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MAMDC2
ZNF550
KCNJ15
SMYD3
ADAMDEC1
ZSCAN32
ZNF174
DUX4
MTRNR2L8
MSH3
DHFR
MTRNR2L2
BTBD8
KRBA1
WDR74
STX5
RAB37
CLDN18
MTRNR2L1
PI4K2B
OBSCN
SMCO1
ARHGAP45
ZSCAN31
TSC22D3
NCBP2L
TMEM43
CHCHD4
PAXBP1
ZWINT
GBA
LOC102724770
DGCR6
SLC28A2
TTLL1
ZNF514
FAM178B
NOX5
RGPD2
RGPD1
FKBP9
OR4K17
KIF5C
ZNF222
ABCC9
JDP2
RGS18
LCE3B
LCE3A
LIMK2
GOLM2
APOC3
APOA1
MID2
PTPRN2
DCP1A
ZNF613
RAPH1
UBC
TRIM48
ZNF134
FBXO31
ZBTB8B
RBBP5
ARID3A
BSDC1
DIO2
NPR1
ILF2
MMEL1
ZNF317
LMTK2
DACH1
ST20-MTHFS
UQCRC1
TMEM89
ZNF761
HTR5A
BRSK2
H4C8
DIP2B
FMO4
TDP2
ACOT13
NXPE4
FAM167A
RAX2
MATK
C19orf18
ZNF91
HLA-DRB1
NDUFS7
CCL24
DEFA6
LOC102724265
FRG2C
TOP3B
IRAG2
FAM184A
ATAD2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MTRNR2L9
POU2F1
FAM209A
ATP5F1B
SNAP47
TARS2
JMJD4
PRIM1
HSD17B6
COX16
SMG6
TBC1D19
ACP6
CCDC130
SLC44A1
GPR19
EIF2D
HECW2
GLT6D1
TMED9
B4GALT7
SUB1
UBE3C
USP30
ZNFX1
TRIM9
AGR3
FRG2
DEGS2
GSTT4
CABIN1
SAMD7
CYP4X1
MKLN1
GPR35
NCOA7
NARS2
PRSS38
UBE4A
SLC36A2
MYH2
CXCR2
RAB11FIP1
FUT8
PIP
OTUD7A
COMTD1
TPM1
ITGB3BP
EFCAB7
TNFRSF13B
TEX38
ATPAF1
ZMYM3
WDR33
FAM227B
DTWD1
RAD54L2
OR4X2
NUF2
CDHR1
TLR9
NCBP3
PDP1
NPAS4
COMMD2
ATP5MC2
ZNF76
C5orf46
LY6L
TLE7
PER3
TMEM259
CNN2
TSPAN10
NPLOC4
CCDC88B
CITED4
SLC33A1
RPS14
ZNF34
DNAH6
HTN1
CASC3
OR2F1
EPS8
WDR11
CNGA3
RD3L
CPT2
MRPL38
TRIM65
TATDN3
NSL1
BCL9
NCLN
S1PR4
H2BC17
H2AC17
OR2B2
SAMD4B
GMFG
TACO1
ZNF394
S100P
STK39
CARD14
FAM174B
DMAP1
KNL1
CALM1
BARHL1
TNKS2
CRP
JAK1
UBE2F
ALG6
AURKAIP1
DENND11
TINAGL1
DBNDD2
GGNBP2
PIGW
MYO19
IRAK2
BCR
GPD1L
ZNF440
ZNF491
WWOX
CHST3
WDFY1
SNX19
ZSCAN18
NGB
PRDX6
LEP
TAFA2
NAP1L4
PADI4
PDE7B
ANAPC1
PPP6R1
IQSEC3
PDRG1
NDST2
ERCC4
ZNF555
BLK
RHOT1
ATP1A1
MAP3K7CL
CORIN
HMGB1
USPL1
NEMF
TM9SF1
UTP3
IPO4
ZNF670
RGPD6
RGPD8
RGPD5
MTNR1B
TOR1AIP2
TOR1AIP1
STAT1
ZCCHC4
PDE8A
TTYH1
PRR25
GNG13
SPINK8
CHTF18
RPUSD1
GBP7
ZNF662
STX18
TRIP4
PCLAF
CCDC150
RRP15
KRTAP9-9
KRTAP9-6
DRG2
OR2AP1
SYT3
KATNBL1
TSKU
EIF4A3
ACYP2
GRM4
OR6B1
DPH6
TMEM229B
MTF2
EXOC6
ZNF501
ZNF502
EPRS1
LGI1
CNTNAP4
SAP130
METTL15
KIF18A
BAIAP2L2
ANKRD20A1
COL23A1
RPS29
RILP
NOD2
FSIP2
SLC44A3
CXCL8
C2orf66
ZNF433
RERE
CDYL
KLHL12
TRPC3
ZNF708
FGD3
RHEX
MZT2A
LRP11
PAX4
ZFP30
STRBP
PDE4DIP
NOTCH2
CD209
DSTYK
CRLF2
SNTG2
FETUB
FOXN1
CCDC92B
MRPL21
IGHMBP2
GNAL
BFSP2
ZNF124
LDHD
SPACA3
EPB41L2
SMIM12
DUS1L
COPS4
RPS6KB2
PTPRCAP
PRSS22
COG2
NCOA3
GABARAPL1
IAPP
TBC1D22A
C2orf88
POLE4
TEFM
FAF1
PCYT1A
CDKN2C
KRTDAP
B4GALNT4
IGFALS
FAM98B
ALG10B
FRG1
BABAM1
XYLB
SCIMP
CASTOR1
NUDT15
ZER1
CDC73
TAF1C
ADAD2
ABRA
RTP5
FAM207A
MYLK
TJAP1
THEM4
MKRN2OS
MKRN2
MFAP3L
COL6A1
LHX6
STX16
RHOG
ZMAT2
HARS2
HARS1
PLK1
CADM3
CREG1
CACNG4
RPS7
POR
NINJ1
FAM72B
KRTAP26-1
CLEC19A
CLTB
RNF217
PKN2
COQ9
CIAPIN1
TTLL12
ALKBH3
CAPG
ZFP37
TACC2
SH2D6
ARSD
MED23
UIMC1
NEUROD4
POLN
HAUS3
GATM
PCDH1
SF3A3
UGT1A10
ELAVL3
FAM160B1
SPTBN4
SYAP1
CDK2AP1
BLVRB
LOC388282
SDHAF3
MUC3A
SNX16
CYP17A1
SELENOH
STX6
ATAD3A
SLC24A1
AGK
DOCK3
CCDC200
DCAF10
ARHGAP32
PCARE
RBBP8NL
MPZL1
C8orf74
POLG
ARHGEF39
SIT1
CCDC107
IKZF3
ZPBP2
ZMPSTE24
ZBED9
SMIM17
ADPRH
PAX5
ZNF169
CD55
LAG3
ZNF598
CAPN2
NPW
SHTN1
NSFL1C
SLC25A51
NEMP1
NAB2
NUP107
FCGR3A
BCAT2
INTS5
GANAB
MRPS14
CRH
ADAMTS17
THBS1
TMEM242
ZBTB26
RABGAP1
TTC26
CBR3
IGSF11
MFSD4B
TEX55
CDK3
MDM4
CEP72
MTR
CSRP1
SLF1
KIAA0825
ADTRP
IFIT1B
ACOX3
CDK5RAP1
NR1H3
ACP2
RHOT2
RHBDL1
ISM1
DGAT1
TRIM52
SCRT1
FGD4
HIBADH
ZZEF1
CYB5D2
ATAD2B
SLC35E3
TLE2
ITGA7
BLOC1S1
RDH5
TLE5
ZNF527
MRPS31
GPAM
TMED1
RAPGEF1
CFAP73
CALCB
ADNP
LAMA5
PACC1
ABLIM1
ATG4C
RBM25
SNX18
TFAP4
VARS2
GTF2H4
MRPS18C
HELQ
GPRIN2
VWA1
TMEM88B
LTB4R
LTB4R2
CIDEB
IMP4
CCDC115
PRKG1
CERS3
LCE4A
C1orf68
FBXW7
GCGR
LIMCH1
EIF4EBP1
ZNF792
MTERF4
OR10A3
SSBP1
CCNB1IP1
PARP2
SRFBP1
CCDC174
ZNF652
MFAP4
CREG2
TNFAIP2
ADRM1
NUP210
ADAM2
DOCK7
MT1X
NUAK2
RAF1
TRANK1
CEBPA
SYT7
AKIRIN1
HECTD2
IKBKE
FURIN
SNX11
CBX1
USP2
MIER2
DPP9
XKR8
FAM214A
TPK1
PNPO
BUD13
ZNF35
GSTO2
PRR15L
AP3B1
PXYLP1
SAAL1
KLKB1
CTAG1B
CTAG1A
FAM193B
GINS1
RNF187
AARS2
ACVR2B
MT1B
MT1A
PUM1
TYW3
CRYZ
CORO7-PAM16
CORO7
SACM1L
TMEM161A
CLUAP1
SCAMP2
THG1L
C16orf90
MPI
FAM25E
ZC3H6
GET4
SYK
PCP4L1
C12orf43
ZNF829
ZNF568
CXXC5
KCNB1
ZNF443
F2RL3
YPEL3
TBX6
ZNF436
TATDN2
CYB5R4
ZNHIT6
AADACL4
ARL4D
COX6A1
THUMPD1
DCTN6
MBOAT4
ZNF562
SLC30A7
EXTL2
DUSP6
METTL8
DCAF17
GTPBP4
TEAD2
DKKL1
ZSCAN30
SNCG
MMRN2
BPIFB3
NT5C3A
MANEA
LMLN
IQCG
FAM153B
ZNF3
GORASP2
PDE11A
IER3IP1
CNGA1
CDCA7
SARS2
MRPS12
COMT
HACD2
ELAC1
PTGER2
SUMO3
ZNF24
PEX7
TXNRD2
GRAMD4
TTC7B
ZNF572
PPIG
FAM234B
FEM1C
MAP3K4
SPATA33
COL18A1
SLC27A5
LGALS12
ZNF341
ADAM21
BCAR3
CD2
PLAAT5
ARHGAP39
AFAP1
APOBEC3B
ZNF143
ZNF426
KAT6B
ZNF30
TLR2
SNX20
FGL2
ZNF324B
MAPK11
RGS21
ZNF117
VPS13D
TSPAN5
PRRT1B
IFI6
MRPS16
MON2
LUC7L2
IL21R
FMC1-LUC7L2
FMC1
RPL39L
MINDY3
EDF1
ZNF132
CYP2C9
GPRC5C
TEDC1
CRIP1
ACY3
GSTM5
PXDNL
TACC1
CRIP2
SCCPDH
FAAH
ANP32D
RFC1
LBP
SHISAL2B
MROH7
DTX2
ST6GALNAC6
UBE2D3
C4B_2
C4B
CEP85
RBPJ
ART1
CISD2
ZNF627
IL22RA2
INKA2
DDX20
DMXL2
IQGAP1
ZNF165
ADCY10
ACAA2
CLIC3
BAAT
C10orf143
NME1
SDR42E1
ST3GAL5
CHD1L
SLC1A7
BANP
DIP2A
MAPRE2
TMEM70
IL36A
PEX3
ADAT2
TMEM41A
RPL27
SEM1
AKR7A3
DNAJC25-GNG10
DNAJC25
RABGAP1L
KMT2A
INTS12
GSTCD
LMLN2
B4GALNT3
LOC110384692
C4A
YY1AP1
DAP3
YWHAQ
ZNF83
ZNF623
YJU2
SATB1
GALNT1
JMJD1C
IFI35
FRA10AC1
ELOC
PLEC
RBM33
TMEM262
SELENBP1
BAX
MRPL44
SGPP1
IFT88
PNMA3
FASTKD1
NKX1-1
GDPGP1
CIB1
MRPS33
LCN15
METTL7A
SULT1C3
ZNF577
PRAMEF1
NDUFB3
FAM126B
EAPP
NOS3
POLD1
TTC32
CYC1
FDX1
POLR2J3
ZBTB44
SAMD14
NARF
CALD1
ZNF594
GJC3
SKP2
LMBRD2
MRPL55
TTC30B
GPAA1
BRF2
HERPUD2
C2orf69
GLRA1
SCGB1C2
SCGB1C1
HAUS5
TMCO2
LCN8
GTF2H2
PPP2R3A
CLK4
PNPLA7
MRPL41
TCF25
PROKR2
SLC41A3
CFHR4
TRMT44
APOL4
CARD6
NRARP
DPY19L4
ENG
PRELID3B
ZNF226
TMEM14C
BTN3A3
MYOG
MOB3A
IZUMO4
RPL37
CHMP7
TNXB
PRKACB
SPATA13
SMARCD2
TMEM106C
RSF1
AAMDC
FRMPD4
ODF3
PIK3R1
SRPRB
EXOC3
ADCY3
COQ8A
ZNF487
TMPRSS12
ADI1
ABLIM2
FEM1B
PAFAH2
RBBP9
FN3K
PHRF1
EXOSC4
C1orf159
TMEM62
CYBC1
LIPA
PSMD8
ZNF614
PSEN1
GTDC1
ZNF561
RSU1
POLR3B
PPIP5K2
FAIM
FKBP5
TFPT
PRPF31
CEACAM21
ACER2
ZNF878
NME4
DECR2
METTL25
CCDC59
TRIP11
ZNF408
ARHGAP1
PPP1R11
PCYOX1
GALK2
LCN6
YTHDC2
SEC22B
KDM3A
CLDN16
ANGEL2
REEP3
CYP4F22
PDCD7
TAS2R39
SEMA3D
ACBD6
ZSCAN29
TUBGCP4
SFT2D3
ZKSCAN3
DNAJB12
GIMAP4
CAT
MAD1L1
GTF3C3
GCNT3
BAIAP2
THAP11
LOC100289561
TIGD2
EIF3L
ANKRD54
ZNF556
PAIP2B
EIF3F
MLLT1
BAG3
VTA1
NMBR
RPIA
TMEM68
TGS1
IFNAR2
PLA2G1B
ZNF391
ZNF280A
ZKSCAN7
CATIP
VPS37C
ATF7IP2
NRBP2
GSTA4
TMCC3
SMG8
AUH
TIMELESS
NUTF2
CENPT
TM9SF2
LSG1
GTF2H2C_2
GTF2H2C
SUPT7L
SLC4A1AP
PARP15
REXO4
ADAMTS13
INO80C
WDR36
TBC1D13
RUVBL1
SLC2A7
TESK2
MMACHC
KIAA1549
SNIP1
POM121
DNALI1
NBPF1
ACTL8
ZNF32
FGFBP3
MRPL40