ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1925740 | iPSC derived neural cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◣ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FRG2C
MAMDC2
FRG2
CCDC200
DUX4
ARL4D
NOC4L
DDX51
ZNF436
ZNF285
ZSCAN32
ZNF174
SNX11
CBX1
KLF4
B4GALNT4
TMEM242
BCAR3
SMCO1
POU5F1
SPATA13
PXDN
RHOT1
KLF14
JMJD1C
REEP3
DYNLL2
EDF1
SNX16
SRSF5
MUC3A
TMEM216
HACD2
DBNDD2
LUC7L2
FMC1-LUC7L2
FMC1
TM9SF2
NKX1-1
SOX2
ATP6V0A1
ATP9B
DIP2B
ELOVL2
COL23A1
PRDX6
TCF19
CCHCR1
C3orf14
MAP3K4
SELENBP1
PI4K2B
C2orf69
C1GALT1C1L
FAM184A
GTDC1
AKR7A3
POU5F1B
RAB37
FANK1
TSPAN5
CCDC130
CYB5R4
CLIC3
MAD1L1
SLC30A7
EXTL2
ATF7IP2
DHX40
TBC1D22A
VN1R4
MAIP1
RPL26L1
PER3
ZNF550
SPATA2
PLXDC2
FEM1C
TMEM43
CHCHD4
PDE4DIP
ZNF627
EDNRA
POTEH
KCNJ15
ITGB3BP
EFCAB7
SLC28A2
CHMP6
UBE3A
ZFP30
RPS14
ATP1A1
NT5C3A
MTF2
CPT2
PLA2G4E
SIVA1
SPDYA
ZNF555
TMEM44
SCGB1C2
SCGB1C1
ODF3
FAM227B
DTWD1
NBPF1
ZNF487
MTRNR2L1
TLR2
WDR33
MRLN
FRMPD4
ZNF229
ZSCAN31
ZNF300
MORC1
SMAD1
ANK1
ST3GAL5
SLC17A5
RNF187
USP30
PEX3
ADAT2
RTTN
GK5
ENOSF1
DHRS7
PAQR9
HNRNPL
ZNF792
BRWD1
NUF2
HLA-DRB1
PNPLA7
MRPL41
RSU1
ARHGEF4
HMGB1
USPL1
TMX4
ZDHHC18
NEMF
TTLL12
PDCD7
TSACC
AVPR1A
SAMD4B
GMFG
CD47
RANGAP1
TRAF6
RAG1
ZC3H7B
EP300
COLEC11
SOX30
TFPI
DRD4
C5orf52
SPATC1L
RPLP1
ZNF24
ART1
GTF2A1L
C2orf88
SPATA6
RNF212B
TRDMT1
SLC11A2
SDCBP
INPP5F
MRPL22
GEMIN5
GTPBP4
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
HUS1
ZKSCAN2
SLC39A6
ELP2
CHAF1B
ANKRD18B
SMYD3
HS2ST1
SELENOF
TBC1D2
ANP32D
CNOT6
NAXD
TMEM239
C20orf141
DCP1A
PTGES2
AGBL3
XKR6
POLR2J3
EIF3L
ANKRD54
CBWD5
CBWD3
URI1
ZCCHC7
GMDS
CLGN
STX16
VBP1
EIF2S2
GAGE2A
ADAMTS20
ZNF594
ZNF614
DUSP16
MIS18BP1
BRSK2
EPB41L2
RPAP2
GLMN
KBTBD7
CNTLN
DNAJC25-GNG10
DNAJC25
HECW2
ANO5
FKBP9
CAT
PAAF1
LBR
SULT1B1
METTL8
C19orf18
SLC44A1
CLPP
HECTD1
OR8B3
GAGE2B
GAGE12I
GAGE7
GAGE5
GAGE4
GAGE2E
GAGE2D
GAGE2C
CNIH4
ITPR2
IQGAP2
EDEM2
SEMA3D
RAD54L2
EIF5A2
BTBD10
NEIL3
STX18
UGT1A10
SPATA22
ASPA
PRELID3B
MRPL40
HIRA
LRP6
NEK7
YTHDF3
PCDHB5
MTRNR2L8
LRIG2
SLC9C1
SLC10A7
ZSWIM9
LIG1
ZNF562
BTBD8
NUP54
ZNF416
ARHGEF12
PLCL2
ZIK1
DNM3
KAT6B
TMEM41A
RIPPLY3
CTNNB1
CRH
C1orf53
LHX9
PRPF40A
ARL6IP6
PI16
ILRUN
GLRB
YPEL3
TBX6
FAM153B
SNX3
PJA2
TASOR
C3orf80
KCTD3
NLGN4X
MAP3K19
PGBD2
KCNF1
RNF225
BTG1
ZNF584
TYW3
CRYZ
GPR150
CNTRL
C5
TMEM98
RNF38
ARMCX1
FGL2
NOTCH2
MAP3K2
ZMYM5
KANSL1
TAS2R4
ZC3H12C
PPP2R2B
RIMS2
PCDH17
RFC1
PARP16
YBEY
MCM3AP
MST1L
TMEM229A
ZNF572
ARHGAP45
DEK
ATE1
ADAM22
MARCHF7
ZNF613
MTERF1
TULP4
RANBP2
PTPN12
USP35
KCTD21
DNAH6
RPS29
RUNDC1
PTGES3L-AARSD1
MED4
PTGES3L
RPL30
ELF1
WBP4
RFK
CTSC
GRID2
MID2
NSFL1C
KIF2C
SH3BP5L
GDAP1
ZNF672
FH
DDX60L
CTXN2
MYEF2
COX6A1
UBE2D3
CISD2
POLE4
RPL11
CREBL2
LIMS1
SLC25A12
RTN3
ATL3
HSPA2
PPP1R36
UGT2B10
DPY19L4
MTERF4
PSMG1
SPAG5
PPP1R9A
KLHL7
RSKR
HACD3
TNFRSF11B
COLEC10
ZNF623
MRPS31
EPS8
SNIP1
DNALI1
NDUFV1
SNRPB
C18orf21
TRMT5
SLC38A6
TARS3
XKR4
KRBA1
ARHGAP32
CLTC
BABAM1
IQCF2
SYTL4
RNF130
OTOP1
POTEB3
POTEB
FGD3
CDYL
SELENOT
HDAC1
AURKB
SAMD13
SNRNP48
UGGT2
ARHGAP39
HYAL1
NAA80
HYAL3
ZNF518A
MS4A1
KBTBD3
AASDHPPT
UTS2B
CCDC50
IQUB
LRRC8C
MFSD14A
DEPDC1
OPRK1
ACBD6
LGR5
MRPL48
SMAD5
FIGNL1
SVOPL
MRPS5
MTHFS
CARS2
ING1
NUDT15
DSTYK
RMDN2
CCNI
VAMP1
TMA16
ZSCAN18
SLC16A2
FBXO34
SV2A
BOLA1
TBC1D3J
TBC1D3F
TBC1D3L
TBC1D3H
TBC1D3G
TBC1D3K
TBC1D3I
TBC1D3E
TBC1D3D
TBC1D3C
TBC1D3
KCNN2
CTAG1B
CTAG1A
MRPL21
IGHMBP2
SMIM13
HLCS
NAPG
DIO2
ZC3HAV1
WNT2B
PCDHGB7
PCDHGA10
CERS6
ARNT
C15orf61
KAAG1
DCDC2
PCDHGA11
ZWINT
ACYP2
RUVBL1
DLAT
SLC25A53
FAM199X
EEFSEC
OR56A5
CEP192
SLC25A18
PEX2
OR8J3
ZSWIM5
COG6
SF3A3
CLK4
SCAF11
EPM2A
TDG
C12orf73
PRKD3
MICU3
WDR74
STX5
CHST3
RNF6
UBE4B
ZNF791
ZNF490
CRTAP
CYB5R1
ADIPOR1
RAD23B
P2RY1
SORCS1
MDM4
NCEH1
GADD45A
MRAP2
EIF3D
ACAT1
LRATD2
SSH2
DKK1
CLOCK
AKR1E2
TTC32
TTC30B
ZNF280D
ZNF286A
STBD1
CPD
PPP2CA
RRAS2
CPPED1
FAM98B
SHOX2
RSRC1
MOS
CCN6
MRPS30
TTLL7
PIK3R1
TATDN3
NSL1
ALKBH3
MRPL42
THAP9
SEC31A
PCBP3
LRTM2
DR1
APOLD1
TYW1B
EIF4G2
FTCD-AS1
STK17A
VPS37A
CNOT7
ATG10
FTCD
PCDHA6
PCDHA5
PRDX3
PPP5D1
CALM3
NFE2L2
EEF1AKMT2
BCKDHB
SLC35B4
RPS6
C16orf89
ALG1
PARP4
INTU
E2F7
ENAH
ALPL
IER3IP1
COG2
VAMP4
TIGD6
HMGXB3
MBD4
IFT122
SH3RF2
STX17
ANGEL2
RWDD2B
TMOD3
SLC39A8
SLC27A2
P4HA1
DTD2
HSPA1B
FHAD1
ZNF606
PCDHA3
PCDHA4
BPIFB3
MED23
GTF2H2
PDCD6IP
FAM120B
RNF125
NSMAF
LHFPL4
WDFY1
MTLN
THOC3
RPL6
PTPN11
VPS26C
NPHP1
PRAMEF17
PIK3CA
ZC3H15
ARFGEF1
L3HYPDH
JKAMP
JRKL
CCDC82
HEATR5B
GPATCH11
TMEM191B
SVIP
HPS3
SGIP1
RIOX1
FLACC1
PCDHGC4
ZDBF2
PCDHGC3
GGTLC3
NARF
CYBC1
REXO4
ADAMTS13
STAT1
ZNF829
ZNF568
ZNF25
NDUFA6
CCDC71L
ARL4A
COPS8
BTG3
SH3GLB1
HACE1
AKNA
BTF3
TRIM27
GNAI1
LBP
SEC22B
KANSL3
FER1L5
ZSCAN25
MYLK
VPS11
HYOU1
NOL12
C5orf60
G3BP2
SUCLG2
CDC42SE2
GPR155
SMARCAL1
INTS12
GSTCD
DRG2
ZNF391
ZKSCAN7
MTIF2
GFM2
SRSF7
NEU1
SIAE
CALM2
PXK
HDAC9
TOMM20L
SPATA7
GPD2
LIN7C
C4orf36
HSF2
LRRC7
POU2F1
YTHDC2
TBC1D5
KAT5
ABL2
CLN5
RNASEH2C
SCGB2A2
SLC36A1
DEPTOR
SOX4
BSDC1
B4GALNT3
METTL25
CCDC59
NCKAP1L
PDS5B
SENP1
PFKM
STXBP5L
FZD1
UBQLN1
SEC61A2
PPP1R12A
NAP1L1
SMIM10L1
PRH1-TAS2R14
PRH1
MPP5
CHST14
GPR88
C2orf66
ZNF324B
ZNF132
COMMD2
RBBP9
GTF3C3
AUH
UBE2Q1
CHRNB2
METTL16
COX18
PHF3
ZNF544
SRSF12
TBC1D31
HERC4
FSD1L
SETD5
KIF1A
NID2
TMEM106C
ZNF443
GINS1
TLNRD1
TMX2
MED19
UBN2
ZNF429
HILPDA
STAG3
GPC2
RBM15B
MANF
GGA1
GAL3ST4
RPN2
MROH8
LRRC75A
AKAP9
NT5E
SLC46A3
WDR72
ACP6
ZER1
TBC1D13
SLC35A3
RPL5
RPL32
HMOX2
NMRAL1
ZNF486
MRPL17
NPIPA3
NPIPA2
U2AF1L5
U2AF1
OPRL1
RGS19
LKAAEAR1
ZNF485
CRNKL1
CFAP61
FBXL5
PCM1
NEK9
SYT1
ZNF518B
DNAH14
ORC2
ZNF354C
SLAIN2
DIPK2A
DPF2
P3H1
TRERF1
DAPL1
ELAC1
POLD1
LRPAP1
HTR5A
MTMR9
TMEM202
MPHOSPH10
MCEE
PTPDC1
SMAP1
SPRYD7
SS18
WDR12
CARF
LOC102724770
DGCR6
ZNF30
SDR42E1
MRPL44
PNMA3
ATR
SMIM12
KLHL20
MTBP
MRPL13
MTR
EXOC2
CBWD6
CADM2
MAPK1IP1L
GOT2
TTC37
ARSK
POLR3D
HADH
CCDC138
HECTD2
RCBTB2
FNBP1L
ISCA1
NELFCD
CFAP206
CHMP2B
CHSY3
CRHBP
SLC25A27
CYP39A1
ADGRG6
TACSTD2
FN1
ZNF32
DUS1L
METTL9
ADAR
FAM172A
C9orf64
DCP1B
ZC3H6
KLHL41
PCNA
GOLGA7B
TMEM230
RCBTB1
MAGEF1
KBTBD6
CDS2
DNAH7
LUC7L3
FANCA
GRIA4
PUS3
DDX25
ZNF341
RPL39L
SRPRB
VPS37C
CD14
TGFBR2
FKBP11
C6orf89
RHEX
PPP1R8
ANO10
BTBD1
ZNF135
PPIL1
PKD2L2
HERC3
PYURF
PIGY
ABHD5
NCAM1
RPGRIP1L
FTO
LPIN1
CENPV
PSMA1
NTSR2
MUC21
SPRN
LRRD1
ZNF26
PDE3B
CEP78
ATP6V1C1
NANOGP8
MSRB2
TJP2
LGALSL
PCDHA12
PCDHA11
PCDHB4
PCDHA13
THUMPD1
GNAL
ANKRD36
ZNF329
INTS9
HMBOX1
MRPL58
FAN1
MTHFD2
RHBDD1
IMPACT
UGT8
MYBL1
GPR37
ATP7B
ALG11
CTHRC1
SMC3
RNF32
NRG3
TMEM185B
KMT2A
PSMD8
MRPL39
RAD54L
IFIT1
SLC25A28
MARS2
SLC25A32
DCAF13
BTRC
EFCAB13
ANTXR2
ZFYVE9
SYS1
GMFB
NASP
NUP58
FZD7
B3GALNT1
TRIL
PRSS38
ZNF662
TMED9
B4GALT7
MEMO1
RPS3A
ALDH3A2
ANKRD36C
OR1E3
HSPA1L
HSPA1A
UBE2V2
ENHO
LSM2
CEP63
ANAPC13
MRGPRX3
BBS5
GTF2E2
RDH14
GINM1
GCH1
STRN3
AP4S1
ZFP2
PCDHA7
EIF2D
ERV3-1-ZNF117
ERV3-1
FAF1
AGK
ZNF512B
AMZ2
INO80D
NOC3L
CCDC90B
CBR3
ZNF454
MINDY2
FAM185A
PAG1
IL17RD
CCDC112
SLC38A1
PCYOX1L
EIF3A
SUSD5