ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1799531 | CD4+ T cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◣ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

DTX2
PI4K2B
AFAP1
TMEM70
ELOC
KCNJ15
CAMK1D
APOC3
APOA1
SLC29A2
TMSB4Y
KRT2
ITGA4
DUSP6
GDPGP1
CIB1
ZWINT
EPS8
LOC102724770
DGCR6
GBA
PPIAL4F
PPIAL4E
PPIAL4D
RUNX2
EXO5
SAMD4B
GMFG
TTLL12
RAB5C
ITGAL
THNSL2
KIAA1549
NOX5
THEM4
ZNF540
ZNF571
SMCO1
KIZ
TSGA10
C2orf15
YPEL3
TBX6
IL21R
SLC38A2
CENPV
SKP2
LMBRD2
DMAP1
MAMDC2
PSTPIP1
ASB2
FAM209A
PAXBP1
PUM1
VSX1
GOLM2
THAP11
NUTF2
CENPT
MRPL44
LIME1
SLC2A4RG
NSFL1C
ORC4
MBD5
GMPS
ZNF792
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SORL1
ZNF527
NUF2
ING2
RAP2C
GRIN1
TEDC1
CRIP1
CRIP2
CCNF
SFT2D3
EIF2D
MTF2
COQ9
CIAPIN1
DGKZ
LRRN3
TENT4B
TCF25
INTS12
GSTCD
PEX3
ADAT2
FNBP1
NDUFS7
RPS7
TNFAIP8
ARHGEF3
HERPUD2
MED23
FAM207A
HDAC7
FAM227B
DTWD1
LRPAP1
RAB37
NAP1L3
FAM133A
DUS1L
HTT
SGPP1
RAD54L2
GGNBP2
PIGW
MYO19
ZNFX1
TTC32
NECTIN4
KLHDC9
PDP1
DCAF10
MRPS31
TFPT
PRPF31
SCMH1
TMED9
B4GALT7
MLEC
TMEM41A
NDST2
ATP5F1B
ADORA2A
NCBP3
MKLN1
CSK
BCL9
PSRC1
NFYB
SLC44A1
STX16
DPEP2NB
GPR68
DPEP2
TMEM262
VWA8
TDP2
ACOT13
SSBP1
ZNF207
C17orf75
AURKAIP1
KANSL1
STX18
EIF3L
ANKRD54
POLR3B
TPM1
DPY19L4
ALG10B
ZNF341
PFAS
CTC1
DRAP1
C11orf68
RPLP0
GCN1
ORAI3
SETD1A
KMT2A
FAM241B
RBBP5
P3H4
FKBP10
CTNNB1
CLUAP1
SLC25A51
BRF1
PACS2
NME1
F2RL3
ZNF226
CAPN10
ZCCHC4
UBE2G1
TMEM68
TGS1
CD2
STX6
SNX16
TRIP4
PCLAF
NLRP1
SELENON
PIK3R4
RPL26L1
TMED2
SPEN
RESF1
TBL1XR1
C7orf26
STAG3
GPC2
WDR74
STX5
ZZZ3
LSG1
DCP1A
SPATA13
DND1
WDR55
STRADA
SF3A3
CARD6
RPL37
ZMYND11
CEP68
ATP1B3
NBN
RPS29
ZNF829
ZNF568
ARHGEF1
CD79A
NLGN3
COX6A1
MRPL21
IGHMBP2
POLR2J3
TNRC6B
NEMF
LBH
ST20-MTHFS
WDFY1
FRG1
FGFBP3
MEFV
ATR
ZNF550
HMGB1
USPL1
FRA10AC1
TOR1AIP2
TOR1AIP1
SCAND1
IRF2BPL
ZBTB20
TTC13
ARV1
CBR4
COX16
ZMPSTE24
TMCO2
TBC1D19
FLI1
CPEB4
BRWD3
PREP
TMEM43
CHCHD4
ANXA2
TTLL1
LSP1
FKBP5
ARMC12
NRG2
INO80D
SRRM3
C2orf66
GTF3C3
RPS11
C18orf25
TMEM255A
ZBTB2
ITM2C
KDM4B
PRIMPOL
CASP3
USP45
TSTD3
ANKRD40
GTF2H2
OSBPL11
NPAS4
IL2RB
DCTN6
MBOAT4
ANKH
HMOX2
NMRAL1
ZNF765-ZNF761
ZNF765
HSPE1-MOB4
HSPE1
HSPD1
NFAT5
HCFC2
GLT8D2
CPLX2
GAA
ZNF157
TMEM242
SEC13
LRRC37A3
C3AR1
IL32
PHIP
KPNA4
TNFRSF1B
CYC1
GPAA1
SUGT1
USP25
PPIP5K2
PPIAL4H
PPIAL4G
NDUFB3
FAM126B
RPS20
DPYD
QSOX1
IL17RA
GRPEL2
PSD4
CDK5RAP1
MANEA
MRPL19
ZBTB39
TAC3
RPL27
IFI35
SNAP47
JMJD4
PPP2R5B
ATG2A
FAM118A
FAIM
ZNF28
RIC1
U2SURP
TMEM116
ERP29
PIM3
IRAK2
HNRNPA1L2
ARHGEF6
PARP14
PRPF18
SNX19
ZNF562
ZNF555
CYP4V2
ISM1
DUX4
NARS1
SBF1
ARL4D
GFM2
EEA1
KDM3B
TATDN2
ACAA2
EP400
SIGIRR
TMEM65
NEIL1
AKT1S1
TBC1D17
PNKP
ERCC6L2
PSMF1
VPS13D
SLC33A1
EMP3
CCDC114
GTPBP3
ANO8
GNB2
MTERF4
SLC39A13
EIF3F
GTF2H2C_2
GTF2H2C
LPCAT4
BACH2
ZNF398
ARAP1
SSTR3
RFX7
TEX9
ZNF681
RPSAP58
ZNF708
TOX2
ZBTB40
TGFBR2
UBE2O
AANAT
TMEM177
PRRC2B
GABPA
ATP5PF
ZNF510
TM9SF1
IPO4
KAT6A
ATF4
HENMT1
TNFAIP8L1
SELENOT
EAPP
LIPA
MINDY3
NOXA1
RTTN
ZNF827
BACH1
CALM1
USP30
CCDC200
LCK
MRPL3
PPM1M
MND1
SESN1
CEP57L1
KIAA1191
ARL10
CPPED1
TLR6
RALBP1
MAPK1IP1L
NOTCH2
EXOC3
ANKRD36
RHEBL1
KMT2D
ASF1A
PSMG3
RFK
POLE4
PTPN4
RWDD3
ARL8B
SNU13
MFGE8
HAPLN3
RBMXL1
KYAT3
SMIM8
GJB7
SAR1B
AAR2
TXLNB
TBRG4
PXK
ACBD6
CAPRIN1
PUSL1
ACAP3
FAM133B
COA6
TEKT2
ADPRS
ITPRIP
DNAJC25-GNG10
DNAJC25
SATB1
USP3
DRG2
HNRNPD
SLTM
RNF138
DDHD2
TBC1D13
HECA
CENPS-CORT
CENPS
IMPA2
RASGRP3
YTHDF2
ADAP1
SNX17
EIF2B4
ZNF513
ENO1
PHF21A
MATN1
RUFY2
ICMT
HES3
RIPOR2
PDS5A
CPT2
TOP3B
KRTAP17-1
KRTAP29-1
KRTAP16-1
RHOT2
RHBDL1
SNX20
PDE6D
COPS7B
INTS4
BNIP1
CYRIB
B4GALNT3
BARD1
TACC1
DDX18
RNF6
IARS1
STAT1
FAM102B
SET
YPEL1
SRPK2
PRKCE
METTL9
RILP
VPS28
SNCG
MMRN2
R3HCC1
R3HCC1L
SLC28A2
ZFAT
NDFIP1
APEH
DSE
MYO1G
TSPYL1
POLR3E
NSUN4
RPL29
YAP1
HMG20B
METTL25
CCDC59
RAB12
SART3
ISCU
RPS14
ATF7IP2
STOML2
AGK
FAM214B
PIGO
EIF1AD
CST6
BANF1
PACSIN2
PPP1CA
TBC1D10C
HYAL1
NAA80
HYAL3
IFRD2
NSMAF
NINJ2
TBC1D10A
ZNF83
ACSF3
ALG10
C10orf88
NOTCH1
PROZ
PAFAH2
DBNDD2
BMS1
ATF1
DSTYK
TPK1
TUBGCP3
ZNRF2
SLC24A1
FLT3LG
HSP90AB1
SLC35B2
TCAF2
NFKBIE
ABLIM1
PUS10
PEX13
FAM160B1
SLC43A2
ZC3HC1
ZNF846
MRPS14
ZNF296
GEMIN7
FOXJ3
CYP20A1
DUSP7
PRRT1B
SMG8
PCYOX1
TIA1
ZC3H6
ERICH5
ATP5MC2
HPS6
ARMH3
LTBP2
SRI
MAP3K5
NRF1
UBE2F
ARID1A
CHAD
RSAD1
ZER1
TTI2
ANKRD36C
TMEM183A
FEM1C
MTA1
SYPL1
TINF2
GMPR2
NEDD8-MDP1
NEDD8
PPP3R1
KCMF1
SDHAF3
TSFM
ACTR6
KCNAB3
CNTROB
CSNK2A2
ORAI2
USP1
LANCL2
EIF3E
PCBP2
EIF5A2
RB1CC1
TAS1R1
NOL9
ZNF391
CDKN2AIPNL
CTF1
BCL7C
SMARCC2
ADAM21
TRIM73
RHOT1
DCLRE1B
AP4B1
C8orf33
SP140
SP110
NELFB
STPG3
FAM166A
TOB2
RSF1
AAMDC
ANXA2R
KIAA0513
VWA7
VPS4A
EFNB3
SAPCD1
IL36A
FAM180B
NDUFS3
KBTBD4
SNRPB
ING3
ATXN7L1
KRTAP12-4
KRTAP10-11
KRTAP12-3
TEX46
KDM1A
B3GLCT
CLUL1
TCTN3
GOT2
TRAF6
RAG1
GLS
SUSD3
ALDH9A1
MYO1D
ITGB3BP
EFCAB7
SNX5
MGME1
ROBO3
B4GALNT4
RAP1GAP
PEDS1-UBE2V1
PEDS1
NUP54
ARHGAP25
DIP2B
ADRM1
RGPD6
RGPD8
RGPD5
GIMAP7
DIPK2A
WDR43
PCID2
CUL4A
NBEAL2
CCDC12
CHMP7
UBAP1
EIF4A2
CEP135
LUC7L2
FMC1-LUC7L2
FMC1
LIG4
ABHD13
EVL
ZNF773
TGFB1I1
SLC5A2
ZNF148
STARD9
KAT6B
HEXIM1
CFAP298-TCP10L
CFAP298
MFAP3L
SLAMF8
GGACT
ATXN2L
FAM228B
TP53I3
SF3B6
METAP1
ZC3H12D
NDUFAB1
GSPT1
HIBADH
INO80C
THUMPD1
RPL39L
MRPS23
WIZ
TMF1
GSTA4
RPIA
OCIAD2
TRO
HUS1
FAM98B
RCOR3
DOCK8
TDRD9
ATP5MPL
EIF1B
MTFP1
ZNF74
POFUT1
PLAGL2
CYB5R4
RMND1
ARMT1
LNPEP
HMCES
MTERF1
WWOX
REEP5
ZSCAN25
ZFP36L1
KBTBD8
RHOG
SNX18
CD5
TES
TECPR1
UBIAD1
KRAS
LCP1
GARS1
GPR84
ZNF561
WSB2
TRMT61B
UCHL5
RO60
GNG2
SMYD3
CIPC
TEFM
SNRPD1
PRELID3B
VTA1
NMBR
SH2B1
BRPF1
TAB1
JRK
SMARCD2
USP4
TTC39C
TMEM222
MRPL1
TOMM6
PRICKLE4
FRS3
ZSCAN12
TSC22D3
ARHGAP30
EPOR
SWSAP1
NCBP2L
DNAJC11
CDK12
MED1
BRIX1
SMPD2
PPIL6
ZNF577
RNF125
MRPL38
WDR47
TRIM65
SLCO4A1
BRD7
NDUFS6
MRPL36
PXYLP1
ID3
KLHL24
TGM1
RABGGTA
PSMB7
LAMP1
EXOSC8
ALG5
TRIM25
ARID1B
TRPC4AP
KRTAP5-6
WDR70
NUP155
RABEP1
EDC4
MFAP5
ERLIN2
CXCR5
ZNF350
KLHL20
HTR5A
MRPS2
C9orf116
THAP9
SEC31A
SIRT6
ANKRD24
SLC48A1
PIH1D1
ALDH16A1
CPSF1
CMPK1
SLC39A4
AOAH
CCNC
SNRPB2
CREBZF
LEKR1
MFSD12
HS1BP3
USP12
TMIGD2
FSD1
PTGER2
TMEM101
MAN2C1
SPIDR
XKR7
BUD13
PPP1R11
POLR1H
RNF39
MADCAM1
ODF3L2
AFAP1L1
RHOH
ANKRD46
UBA3
ARL6IP5
ATL2
FAM53B
ATG101
SMIM41
RERE
WDR36
NR4A3
CERS6
RUVBL1
FIS1
CLDN15
SERBP1
SNX12
SELENOH
NME6
GALK2
COPS2
SYTL2
GORASP2
LYPLA2
GALE
S100P
CNOT6L
KLHDC2
PHF2
CD69
CHADL
PIP4P2
ADPGK
MOB4
KCTD5
CCDC42
WASL
LRRC75A
CD83
TADA1
ZNF134
PHB2
ATF7IP
EID2
PDE11A
RBM45
BRDT
ELAC1
EGR2
EDEM1
CEP85L
DDX1
MRPS15
ENDOD1
LAIR1
RABGAP1L
VRK2
MAF1
WDR97
FBXO4
PUM3
SLC27A4
NRROS
FAM78A
PDHX
APIP
ZNF317
TRAM1
PPP4R3B
TMEM114
MED4
TSPAN10
NPLOC4
ELOVL5
TLN1
CREB3
OAS2
C18orf21
SLC35A3
TRMT2A
RANBP1
ZNF770
CLCC1
SNX1
CIAO2A
XPO1
ZFYVE9
PPIB
ARFGEF1
SDK1
CBWD5
CBWD3
USP15
CUTC
COX15
LLGL1
IST1
SCRIB
NCAM2
MAPK11
RPS19
TMBIM1
CDC42SE2
ACOX3
TRMT44
TIGD1
EIF4E2
CRBN
MRPS35
LRRC66
PSMD3
TUT7
SCAF8
RASSF5
TOX4