ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1177903 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◣ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MAMDC2
FRG2C
PMF1-BGLAP
PMF1
FRG2
MAPK11
UNC45B
NLE1
COL23A1
DUX4
FANK1
LOC102724770
DGCR6
ART1
PHB
KLHDC4
B4GALNT3
CCDC200
TTLL12
POTEH
BAGE5
BAGE4
BAGE3
BAGE
PMAIP1
SUPT6H
SDF2
SNX11
CBX1
ALKAL1
LMLN2
SCGB1C2
SCGB1C1
ODF3
ZNF264
MUC3A
NARF
CYBC1
ZNF487
CANT1
EEF1A1
PDXDC1
MRPS7
GGA3
MIF4GD
NDFIP1
UNK
H3-3B
FAM117A
ARL4D
SCAF11
ATAD2
FH
CACUL1
TCF7L2
OR8J3
MPZL1
KIF5C
PHC2
ZSCAN25
SHOC2
BBIP1
CYC1
MAF1
TMEM71
PHF20L1
BAG3
MTRNR2L8
AHI1
UBALD2
TRIM48
OXLD1
CCDC137
NBPF1
STX12
TTYH2
RPL38
ZFP91
LPXN
USP10
NOTCH2NLC
NOTCH2
FRG1
LEMD3
GRB2
TRAP1
WASHC5
NSMCE2
ABRAXAS2
DDX17
SLF2
CTAGE8
CTAGE4
ACSL3
KIAA1549
DNASE2
PDCD6
PHF11
SMC3
REPS1
ZNF12
TRMT1
NACC1
CCDC30
ZMYND12
PPCS
THOC3
SMNDC1
UROS
BCCIP
DNAJB12
DHX35
PRR14
FBRS
PAXBP1
LOC100289561
TNFAIP8
SPDYE6
ATG16L1
PDE4DIP
SMAP2
CHORDC1
EXOSC2
ABCD3
NME2
EIF3F
WDR43
MUC1
CSNK2A2
ZNF717
SURF4
ZKSCAN1
VKORC1L1
ICE1
PCOTH
MIPEP
C1QTNF9B
UBR5
MSH3
DHFR
MTRNR2L2
EXOC6
TACO1
DPP9
C8orf76
ZNF652
IMMP2L
ATL2
SPAG9
FBXO11
PLEKHA1
SEC61G
C10orf88
EPN1
MCMBP
MTMR4
CCDC186
NDUFAF6
TDRD1
SPATS2L
PPA1
XPO5
POLH
MTX2
PIGF
CRIPT
BICD2
TEX10
OTUD7A
ZNF718
ZNF595
PRKACB
LRRC47
C7orf25
PKD1
C15orf40
ABCA5
SERF1B
SERF1A
CPT1B
CHKB
ABL1
POMZP3
KLF5
MSANTD4
USP7
FBF1
EFR3A
TSPAN10
NPLOC4
MTHFD2L
RMDN1
CPNE3
NDUFAF8
TEPSIN
NOTCH2NLB
NOTCH2NLA
GLI4
KRTAP4-8
RPS15A
CLK1
KRTAP4-11
SAMHD1
KRTAP4-12
PANK2
MTERF1
WDR31
BSPRY
TADA1
ZNF326
SEPTIN9
SMAD5
DYNLL2
DECR1
ARHGAP11A-SCG5
ARHGAP11A
ARHGAP39
HIPK1
CEBPG
IKZF5
ACADSB
EIF2AK3
WASHC1
ARHGAP29
PREP
IREB2
ASPH
E2F3
EIF3A
ZMYM3
PRIM2
TAF10
ZDHHC6
VTI1A
RRP8
ILK
TPP1
ALAS1
MSRB2
PKD2
ST14
SEC22B
WNT16
LATS1
POM121C
RBM42
DSCC1
SPDYE5
MTDH
RDH14
MPP7
C8orf33
ECE1
PLEKHA3
FKBP7
SPDYE16
MYO5C
ETNK1
PIK3CA
GAN
CACTIN
VOPP1
GPI
DYRK3
JMJD1C
COPG2
ADAR
NCBP2AS2
NCBP2
RPL13
LSM6
REXO2
C16orf87
PDCD4
RWDD2B
FNBP1
USP16
KRCC1
WAPL
SUMO2
OR2A7
KAT5
RNASEH2C
MTRNR2L1
PDP1
PDXK
BFSP1
FAM13B
SEC62
TM2D2
ADAM9
DSTN
COL4A4
COL4A3
FAM234B
GTF2A1L
SCYL3
GLS2
PNP
C1orf105
PIGC
PIP4P1
GSTO1
OSGEP
APEX1
OAT
CLTCL1
SIN3B
SMARCE1
TMX4
CCZ1
FXYD3
HGH1
FBXO31
MRPL20
SLC45A4
MAP1LC3B
POMP
ARF6
CCDC138
CCNL2
RBM22
SEC11C
SAFB2
SAFB
CBX2
FAM169A
VAMP3
MEIS3
RECK
TMBIM4
SENP1
PFKM
MRTFA
SLC38A2
SBF1
CASP2
USP36
TMEM139
PARP8
ETS2
ADM2
ACOX3
TRMT44
SMARCD2
NDUFAB1
ZCCHC8
EHD4
YTHDF1
RALGAPB
RBPMS
TPT1
MICU3
TBXT
CLN6
MYBL1
PLA2R1
MYD88
ACAA1
ESCO2
CCDC25
GSK3A
ELOB
DGKZ
ALDH7A1
PLEKHF2
WAC
TESK1
FERMT1
PREPL
CAMKMT
LEMD2
CRLS1
PHAX
GPS2
EIF5A
DUSP5
ZNF706
NPC1
PAWR
FAM124A
ZNF623
TIGD2
GFI1B
TSC1
SS18L2
SEC22C
MKRN1
PRDM4
MYLK4
TMEM131L
WRNIP1
IGSF3
RAB4A
OR2J2
DNMBP
PIAS4
TMEM245
USP33
RFT1
CALCOCO2
LRCH3
METTL23
JMJD6
RGS22
TEX46
KDM1A
FAM83D
FLYWCH1
OXR1
CLTA
GJB2
ARL8A
ATP8B1
DENND10
SDR42E1
HPS6
ARMH3
HGS
ARL16
TMOD3
RAB5A
EFHB
CYB5R1
ADIPOR1
ZNF276
VPS9D1
OSBPL5
DCUN1D2
TBC1D31
RAB11B
STT3B
TBL2
YPEL2
INTS8
ELOVL7
SLC25A37
NOL4
HMHB1
RUVBL1
RAB18
SURF2
SURF1
RPL7A
MED22
EEFSEC
SOCS5
HERC3
ANKLE2
MEST
UHRF2
WWP1
RAPGEF5
UBE3A
UTP18
MBTD1
ANAPC7
ACVR1B
MCL1
ATP2A2
EXT1
ZNF775
FEM1C
PRELID3B
ZNF227
RFC4
ABI1
PAG1
PRDM2
PCNX2
RCN2
ZBTB10
ARSB
SCN8A
P4HB
DOCK5
AKIRIN1
OCIAD2
SRSF5
PM20D2
DPAGT1
TSPO
MCAT
C2CD2L
FBXO33
TMEM160
KRT19
NF1
TSPAN3
FANCA
C11orf97
OR2B6
UBE2G2
KRT15
COBL
EGFR
PEX7
RP9
ANGEL1
LBR
RNF169
TAF5
ANTXR2
ANKRD18B
MFSD12
RB1
MST1L
DOCK1
CTNNAL1
ACTL8
ZBTB6
RC3H2
TBPL1
SLC25A28
KIAA1586
SPG11
PARP6
HMGCR
TERF2
PMEL
RAB5B
CDK2
VIPAS39
AHSA1
NSF
CTAGE6
PELI1
HSP90AA1
RC3H1
TMEM175
GAK
ANAPC11
ALYREF
SLC38A10
AGO2
EPS8
CYREN
UBN2
TBC1D30
TIMM23
RPS27A
CLHC1
COX18
TRAPPC3
MAP7D1
ELOVL5
PLGRKT
MARCHF6
SUFU
ACTR1A
EMC9
GMCL1
PSME1
FITM1
PDPK1
GNS
CEMP1
SBNO1
DYRK1A
LSM11
ZFYVE27
LPGAT1
FADD
FARP2
SYNPO
APPBP2
HNRNPM
CDC25A
USP43
PALM2AKAP2
FDX1
RPS20
PRPSAP1
MRPL38
BMT2
TRIM65
ANKRD46
GRPEL1
NUDT4B
NUDT4
NFATC2IP
VPS13C
C2CD4A
CDR2L
ALDH4A1
NAMPT
RRAS2
MAPK9
URB1
HNRNPAB
FRMD5
UBN1
GLYR1
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
CRKL
ARID2
HEBP2
BZW1
URGCP
RAB6A
UBE2Z
XPA
MAP3K3
DENND1A
E2F6
PGAM5
NEDD1
URGCP-MRPS24
LRPPRC
TOB1
YWHAH
C22orf24
SMARCB1
PDIA5
ILKAP
ISL1
CPT2
NT5C3A
EMILIN1
OST4
ITPRIP
SART1
GPN2
CNKSR3
ARFGEF1
GOLGA7
P2RX4
ARL5A
SSRP1
P2RX3
DENND2B
PPP1CB
TMEM131
MAFG
ZNF607
SIRT7
PCYT2
UBE2S
NHLRC2
DCLRE1A
PCDHB15
PARK7
APEH
VPS26C
ABHD10
GATM
SPATA5L1
MIS18A
SLC25A1
GPRIN1
GPC1
XPNPEP1
CD81
PLCG2
ATP1A1
STAT3
SMAD1
AGK
CLTC
EPB41
PNPO
FAM86B1
GPX1
LRRC58
RNF145
TM9SF3
YWHAZ
ITM2B
SPATA6L
PLPP6
MATN2
TYRO3
ZNF611
LRRC37A3
F2RL1
CRELD1
ACSF3
TMEM202
MAPKAPK5
EEF1AKMT2
HEXB
NUDCD1
SMAD3
CENPC
SYT1
DNPH1
GOLGA6L10
HSPH1
MGRN1
DOCK9
AGTPBP1
CYTH1
STK3
ANK2
FZD6
STIP1
SINHCAF
CXCL1
MORC4
MKI67
RALYL
LRGUK
KLK2
POLE4
CTNNB1
LRRC59
RTN4
USP6NL
OSBPL8
DYNLRB2
RNF168
NSD2
RABL6
EFCAB14
CCDC183
NT5C2
KRT10
HASPIN
SYBU
DNAJC1
MICOS10-NBL1
MICOS10
FCHO2
DCAF12
SEMA4D
CLSTN1
CLYBL
TMCO4
KLHL20
SOD2
PHB2
WTAP
MTMR12
MARK2
STX1A
SCARB1
CISD3
GTSE1
PSTPIP2
VRK1
C10orf95
RPL7
RDH10
ZCCHC14
ANKRD28
NOP9
DHRS1
COPRS
KIRREL1
ZNF577
SRPRB
TGFBR2
MIF
PGM2
FBXL13
ARMC10
EXT2
STAMBPL1
PDCD5
ZC3H4
HNRNPU
FUCA2
FAM53B
CXCL2
EIF3B
OTUB1
MTAP
ERO1A
SDHA
CCDC127
CCNJ
CHL1
SNX16
MTR
TRAM1
TSPAN14
UBQLN1
PTPRF
DGKH
RHOC
RNF135
RNASEH1
GALNT12
PTBP3
C9orf85
ABHD17B
STPG1
NIPAL3
MFSD11
ARPC1A
SRSF2
HIPK3
ADHFE1
RRS1
NELFCD
MIEF1
STX17
PPM1J
FAHD2A
AP3D1
HMGB1
NFAT5
PTPN4
DOCK7
PLEKHG1
COX6C
C22orf39
SLC26A6
PINK1
COP1
TPMT
KDM1B
NDUFV3
PPP6R2
KLHL5
TM4SF20
C1GALT1C1L
RNF207
RPL22
CCDC88A
IQCF2
ADPGK
UNKL
PTP4A2
MRPS36
H2AZ1
DNAJB14
SOCS3
TICRR
TPD52
HSPA4
CTPS1
CNN3
DBNDD1
ERRFI1
CNNM2
GAS8
MSH6
TMEM51
SLK
FAM110C
HACD2
C2orf69
FOXJ3
KDM3B
HDAC1
TBC1D5
NDUFS6
MRPL36
SH3BP5L
PISD
CDK11B
CDK11A
ZNF672
MARCHF8
DEF8
PLA2G2A
PROSER1
NHLRC3
NANOGP8
TTBK2
ZC3H7A
ARHGEF35
EYA1
SBK1
RPL14
ENTPD7
FAM91A1
SPEG
PANK1
DUT
MTFMT
SCD5
DUSP6
CDCA7
SCAND1
NT5DC1
EMC8
COX4I1
KLHL41
SULT1A4
SULT1A3
PSMG4
EIF4H
FBXW8
B9D1
C1QBP
MLYCD
GIMAP7
B4GALT4
OTULIN
ODF2
CSNK2A1
MRPL52
MMP14
SCRN3
CIR1
FAM104A
C17orf80
EXOSC10
COA8
BAG5
RBM12
CPNE1
UVRAG
CCDC178
POPDC3
STMND1
PI4K2B
DSTYK
PDCD2
PRRC2B
ARL17B
ABLIM1
TMEM109
KCNJ1
NUS1
SLCO4A1
YES1
TSNAXIP1
EIF2S2
C6orf226
H2AX
ARL17A
RAD23B
PRPF19
MAGEF1
UBFD1
EARS2
SPG7
OSBP
BPHL
HMBS
FBXO42
CAPN2
TEAD1
POLR2D
TANC2
TADA2B
RANBP10
RAB2A
PIGN
ELK3
STX3
CCDC96
FEZ2
DPYS
LGALS3
CD9
SH3GL2
CYP2A13
MRPL30
MITD1
GATAD1
WASHC2C
MEF2D
TOMM34
STK4
MYO7B
DLG2
IWS1
PSMD1
DTD2
PPP1R9B
DHRS11
MRM1
SPOPL
SERINC2
RCL1
MPP5
POMT2
GSTZ1
PDZD8
SLC12A5
NCOA2
UAP1
RHNO1
FOXM1
ROCK2
PLBD2
SLC25A31
HSPE1-MOB4
HSPE1
HSPD1
F11R
RANGAP1
PLEKHM1
TSTD1
UBAC1
AEBP2
USP1
PKIG
CPOX
TRMT10C
RNF139
TRIB1