ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: DRX402535 | MYL
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◣ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MAMDC2
KIF5C
MSH3
DHFR
MTRNR2L2
MTRNR2L1
MTRNR2L8
DUX4
MUC3A
SMYD3
MTRNR2L9
LDHD
FRG2C
ZNF229
YPEL3
TBX6
RBMXL2
ARL4D
PI4K2B
GRAMD4
ZNF324B
ZNF132
LOC102724770
DGCR6
ZNF285
TATDN2
ZNF550
ZWINT
WDR74
STX5
DUSP6
ZNF708
TMEM68
TGS1
MYO16
F2RL3
TEAD2
DKKL1
ART1
ST20-MTHFS
RHOT1
ZNF426
FRG2
SNX16
DEGS2
KCNJ15
SLC27A5
THEM4
ZNF436
COL23A1
TTLL1
ZNF562
ZNF527
SMCO1
BAG3
SEC22B
CYC1
GPAA1
EXOSC4
ARHGAP39
LYN
THUMPD1
ZNF433
PXDNL
ADCY10
KRBA1
SMG8
SNCG
MMRN2
HP
COX6A1
UBE2V2
CCDC200
OBSCN
UBE2D3
CISD2
ZNFX1
FAM193B
C19orf18
CYP17A1
BORCS7
ZNF761
MRPL20
ANKRD65
SUMO3
CSNK1G2
SLC1A7
GLO1
SPATC1L
UQCRC1
TMEM89
SPATA33
SIGLEC14
ACP6
MKLN1
LGALS12
PLAAT5
ZNF572
SARS2
MRPS12
HLA-C
UBE2F
MID1
ZNHIT6
DCTN6
MBOAT4
BRSK2
WDR33
SAMD7
PRKACB
BSDC1
SPSB1
HFE
TSKU
EDF1
DPY19L4
MROH7
FAM184A
CTAG1B
CTAG1A
SHOX2
RSRC1
HSD17B4
CYP4F22
CDCA7
ENG
CATIP
SIGLEC12
EIF4EBP1
ZNF134
GIMAP4
RGS21
YY1AP1
DAP3
HYAL1
NAA80
HYAL3
MSMO1
C2orf88
INTS12
GSTCD
TMEM242
TOP3B
FEM1B
AURKAIP1
SNAP47
WDR31
BSPRY
NOX5
ADI1
TAS2R39
CYP46A1
GAD1
DBI
C2orf76
ITGB3BP
EFCAB7
IER3IP1
PNPLA7
MRPL41
RFXANK
BORCS8-MEF2B
BORCS8
CD2
MANEA
BCR
FGD3
TTC7B
KAT6B
CIPC
ACOT2
MFF
HEATR4
ZNF564
KRTAP10-9
C11orf96
GATAD1
OR2W3
SYCE1
ZNF613
ERICH3
IGFALS
APOL4
TGFBR2
ATP5F1B
NARS2
MRPS31
ESR2
REN
MON2
GTPBP4
TTC38
PKDREJ
SRSF12
MS4A6A
FXN
MGA
EXOC6
SGMS2
MAPK11
TOR1AIP2
TOR1AIP1
ZNF878
PALM3
PER3
PRRT1B
GBA
TMEM14C
LONRF2
DTWD2
ZNF169
NARS1
PKMYT1
NDUFS7
C2orf69
COQ8A
BDH1
COMT
TXNRD2
POM121
MTIF2
ZNF296
GEMIN7
CYB5R4
SAP130
ZMPSTE24
PPP6R1
ZSCAN32
ZNF174
APOBEC3B
NME1
TULP4
PADI4
SNX11
CBX1
CEP85
BCL7B
PRDX6
GALNT1
RSF1
AAMDC
MRPL1
MRPL44
GJD3
FEM1C
INSL6
LMLN
IQCG
CCDC97
RFX2
TUBE1
FAM229B
TPGS1
MADCAM1
MRPL15
ZNF69
ZSCAN18
PTGER2
TLR2
ZNF582
ZNF583
ST8SIA6
ARHGEF1
CD79A
OTUD7B
PUM1
NUF2
ZNF117
TRIP11
NRBP2
PRDX1
MED23
ZBTB44
ADCY3
JSRP1
EHD2
OAZ1
ACY3
NEMF
SPACA3
TONSL
METTL8
DCAF17
CEP72
GSTA4
SLC28A2
GLT6D1
TMEM262
TMEM62
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MINDY3
LY6L
LSS
RBM33
GALNT7
DCAF10
MAN2C1
PIH1D2
NKAPD1
STX18
ZNF792
DIP2B
ELAC1
PPIG
DSTYK
PIP5K1C
TATDN3
NSL1
CEBPD
SIGLEC8
PDXK
SCLY
ZBTB45
RPL12
LRSAM1
SF3A3
MTRF1
NME7
BLZF1
PRAMEF1
LSG1
TBC1D12
MRPL55
SLC30A7
EXTL2
IFI6
SSBP1
GPR35
ECI1
ZNF341
COMMD2
DCP1A
CUTC
COX15
ACER2
DBNDD2
FAM209A
PDP1
AADACL4
EIF4A3
CPT2
IRAK2
ZBTB8B
ZSCAN31
MID2
ZSCAN30
TBC1D22A
BPIFB3
NT5C3A
FAM153B
ZNF3
GORASP2
PDE11A
CNGA1
HACD2
COQ9
CIAPIN1
ZNF24
ZNF555
PEX7
RGS18
ZBTB26
RABGAP1
FAM227B
DTWD1
TMEM229B
BTBD8
CCL24
FAM234B
MAP3K4
B4GALNT4
APOC3
APOA1
CRP
COL18A1
ADAM21
AFAP1
BCAR3
C2orf66
PAXBP1
RBBP5
ZNF143
MTF2
ZNF30
RPS7
SNX20
FGL2
ZNF514
LEP
VPS13D
TSPAN5
STX16
PDE4DIP
DMAP1
PIP
OR4K17
MRPS16
LUC7L2
IL21R
FMC1-LUC7L2
FMC1
RPL39L
SAMD4B
GMFG
PRSS38
CYP2C9
GPRC5C
TEDC1
CRIP1
GSTM5
TACC1
CRIP2
ACYP2
SCCPDH
FAAH
ANP32D
RFC1
LBP
MYH2
SHISAL2B
DTX2
ST6GALNAC6
C4B_2
C4B
RBPJ
ZNF627
IL22RA2
INKA2
DDX20
DMXL2
IQGAP1
ZNF165
LMTK2
TYW3
CRYZ
ACAA2
CLIC3
PTPRN2
BAAT
C10orf143
SDR42E1
ST3GAL5
CHD1L
BANP
COX16
TTLL12
DIP2A
MAPRE2
TMEM70
RPS29
CCDC130
IL36A
PEX3
ADAT2
MDM4
TMEM41A
RPL27
RAB37
SEM1
GPD1L
AKR7A3
DNAJC25-GNG10
DNAJC25
EIF2D
RABGAP1L
KMT2A
LMLN2
B4GALNT3
LOC110384692
C4A
YWHAQ
ZNF83
ZNF623
YJU2
SATB1
CALCB
JMJD1C
IFI35
FRA10AC1
ELOC
PLEC
IFT88
SELENBP1
BAX
SGPP1
PNMA3
ACOX3
NUDT15
FASTKD1
NKX1-1
GDPGP1
CIB1
POLE4
MRPS33
LCN15
METTL7A
SULT1C3
ZNF577
HMGB1
NDUFB3
FAM126B
EAPP
NOS3
POLD1
TTC32
FDX1
POLR2J3
SAMD14
NPAS4
ZNF662
NARF
CALD1
ZNF317
USPL1
ZNF594
GJC3
SKP2
LMBRD2
TTC30B
BRF2
HERPUD2
POU2F1
TDP2
ACOT13
CHST3
TMEM43
CHCHD4
TBC1D19
GLRA1
SCGB1C2
SCGB1C1
NOTCH2
HAUS5
TRIP4
PCLAF
TMCO2
LCN8
ZFP30
GTF2H2
PPP2R3A
CLK4
SELENOH
TCF25
PROKR2
SLC41A3
CFHR4
SLC24A1
TRMT44
CARD6
NRARP
ZNF440
ZNF501
PRELID3B
ZNF226
BTN3A3
ATP1A1
ZNF491
MYOG
MOB3A
IZUMO4
RPL37
CHMP7
TNXB
DRG2
SPATA13
PHRF1
SMARCD2
TMEM106C
NXPE4
RERE
ZNF443
FRMPD4
ODF3
PIK3R1
SRPRB
EXOC3
ZNF487
TMPRSS12
SLC33A1
ABLIM2
TM9SF1
FKBP9
PAFAH2
RBBP9
FN3K
NSFL1C
C1orf159
CYBC1
TARS2
LIPA
PSMD8
ARHGAP45
ZNF614
PSEN1
GTDC1
ZNF561
RSU1
POLR3B
PPIP5K2
FAIM
FKBP5
TFPT
PRPF31
TTC26
RTP5
RPS14
CXCR2
CEACAM21
NME4
DECR2
METTL25
CCDC59
ZNF408
ARHGAP1
ALG10B
PPP1R11
PCYOX1
GALK2
LCN6
YTHDC2
KDM3A
CLDN16
ANGEL2
REEP3
UTP3
PDCD7
SEMA3D
ACBD6
ZSCAN29
TUBGCP4
SFT2D3
SLC44A1
SLC25A51
ZKSCAN3
DNAJB12
CAT
MAD1L1
GTF3C3
GCNT3
FRG1
IPO4
BAIAP2
VARS2
GTF2H4
THAP11
LOC100289561
TIGD2
EIF3L
ANKRD54
ZNF556
RAD54L2
PAIP2B
EIF3F
MLLT1
INTS5
GANAB
VTA1
NMBR
RPIA
ZER1
GOLM2
EPS8
IFNAR2
PLA2G1B
ZNF391
ZNF280A
ZKSCAN7
VPS37C
ATF7IP2
TMCC3
AUH
TIMELESS
NUTF2
CENPT
TM9SF2
GTF2H2C_2
GTF2H2C
SUPT7L
SLC4A1AP
CD209
PARP15
REXO4
ADAMTS13
INO80C
WDR36
TBC1D13
RUVBL1
SLC2A7
PRIM1
TESK2
MMACHC
KIAA1549
SNIP1
DNALI1
NBPF1
ACTL8
ZNF32
FGFBP3
MRPL40
HIRA
LRPAP1
FBXO31
DIO2
HLA-E
MYL12A
ACTRT3
HTR5A
ZNF222
RPGRIP1L
FTO
COLEC11
POLR1H
RPL11
CLPP
STAT3
ITGA4
DCLRE1B
AP4B1
TMEM44
CAMK1D
EIF1AD
CST6
BANF1
RMND5A
LRIG2
STAT1
MTERF4
MACC1
RTTN
ZNF350
SAR1B
PARK7
DRAP1
C11orf68
FAM207A
TEX46
KDM1A
HSD17B6
MTERF1
TEFM
PDCD2
EFCAB10
PLA2G4E
MSRA
BMS1
RILP
ZNF841
C3orf14
CDK5RAP1
TACO1
GINS1
RNF187
L2HGDH
DMAC2L
ZNF829
ZNF568
CCNT1
TTC13
ARV1
JMJD4
KRTAP10-7
SRRM3
SLC9A1
SCMH1
ANK3
MAP3K2
EPB41L2
SNX17
EIF2B4
ZNF891
ZNF10
SCAND1
ZC3HAV1
PRIM2
PSMF1
ETFBKMT
TXNL4B
DHX38
TMCC1
ATR
USP30
ORC5
GBP4
THOC5
PDE6D
COPS7B
ORC4
MBD5
NBN
POLR3E
NPR1
ILF2
NCKAP1L
CCSER2
DEK
PRRC2B
MRPL21
IGHMBP2
CREBL2
PHGDH
TMEM161A
TTYH2
ZNF394
SMIM12
SGCE
PEG10
SLC29A2
RAB30
TRUB2
COQ4
CANT1
NCOA7
WDR11
ABL1
FAM228B
GTF3C5
ZNF772
TNFRSF1B
TMEM222
TAF12
PDS5B
MOB4
LARP1
PHB
CTSV
ATP5MC2
KANSL3
FER1L5
ZNF502
SETDB1
LPIN1
SUPT6H
SDF2
BACH2
ZNF540
KRTAP10-8
RALBP1
DUS1L
ZBTB40
NECTIN4
FBXL12
SMAD1
TXN2
SCAF11
CD47
ATF7IP
CCDC150
EML5
MCF2L2
TP53I3
SF3B6
ZNF513
C1orf167
OTUD7A
MRPS18C
HELQ
FAM133B
CYB561D1
ADNP
TNFAIP8L2-SCNM1
TNFAIP8L2
ZNF571
MTA2
DNM1L
B3GNTL1
TMED9
GAS2L3
FRRS1
ZNF207
C17orf75
OAZ3
HSPE1-MOB4
HSPE1
HSPD1
WDR43
PRKAR2B
AKAP10
SMIM31
SAMD4A
RMND1
ARMT1
B4GALT7
CLTB
DPP9
KLHL20
BNIP1
C1GALT1C1L
SPAAR
HRCT1
MRPS23
C16orf54
CPPED1
CD14
IST1
LGR5
PCP4L1
TUT1
TMOD4
SCNM1
RAX2
LYSMD1
GASK1A
ZNF557
NUP54
GTPBP3
ANO8
ZNF441
COPS4
PDCD6IP
ZNF263
MMP7
MIPOL1
GFM2
KIF2C
PGAP6
ERV3-1-ZNF117
ERV3-1
N4BP2L1
ZNF611
BRWD1
PLEKHM3
ATP9B
NFE2L3
FAM180B
TNFAIP8
NDUFV1
GABPB2
GOLGA5
ZNF300
DUSP16
DND1
AGL
ZNF609
HACL1
BTD
UGT1A10
WDR55
STAU1
RMDN2
BCL9
CDYL
RPS20
DDX18
CTNNB1
TMEM79
SMG5
MACROD1
NCBP3
MRPL48
SEC13
EXO5
ZCCHC4
RPL10L
SNRPB
RNASET2
ABR
ANXA2
UBE2H
SNAP29
PI4KA
MAIP1
POLG
GRPEL2
NDUFS3
KBTBD4
NR1H3
ACP2
SERHL2
DNAJC3
CYREN
NAA20
TTI2
CDC73
EPM2A
CPA2
ERN2
ARID1A
ZNF230
ZNF566
MLEC
HNRNPD
CBWD5
C10orf99
TPR
ODR4
ZSCAN25
C18orf21
FAF1
FBXO38
LZTR1
TMEM101
NRL
DCAF11
OPA1
TLE7
ATXN7L2
CFAP298-TCP10L
CFAP298