ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2545063 | LNCAP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◣ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MAMDC2
LOC102724770
DGCR6
DUX4
PTPRN2
FRG2C
MTRNR2L1
SNX16
TRIM48
MUC3A
FRG2
MSH3
DHFR
MTRNR2L2
WDR74
STX5
SMYD3
COL23A1
PDP1
ZNF550
SMCO1
PI4K2B
ZWINT
CRP
ZNF91
MTRNR2L8
ARHGAP45
CYP2C9
ART1
RAB37
GBA
KCNJ15
ATP5F1B
CCDC200
FAM153B
BCR
FKBP9
CALCB
NOX5
ST20-MTHFS
PIP
LIMK2
THEM4
BRSK2
LDHD
OBSCN
MKLN1
KRBA1
DBNDD2
FAM209A
TSKU
WDR33
TATDN2
F2RL3
YPEL3
TBX6
ZNF436
ZNFX1
ARL4D
AADACL4
CYB5R4
ZNHIT6
UBE2F
COX6A1
EIF4A3
CPT2
BSDC1
THUMPD1
ZNF708
SLC28A2
DCTN6
UQCRC1
MBOAT4
IRAK2
TMEM89
ZBTB8B
ZNF562
SLC30A7
EXTL2
ZNF433
ZSCAN31
ITGB3BP
EFCAB7
EIF4EBP1
DUSP6
ZNF527
METTL8
DEGS2
ZSCAN32
ZNF174
PER3
DCAF17
TEAD2
DKKL1
GTPBP4
DIP2B
MID2
ZSCAN30
SNCG
MMRN2
TBC1D22A
FGD3
BPIFB3
NT5C3A
GLT6D1
MANEA
RHOT1
LMLN
IQCG
ZNF3
TTLL1
GORASP2
CTAG1B
CTAG1A
PDE11A
FAM184A
IER3IP1
NOTCH2NLC
CNGA1
CDCA7
ZNF134
SARS2
MRPS12
COMT
HACD2
ELAC1
ZNF792
NOTCH2NLB
NOTCH2NLA
PTGER2
SUMO3
COQ9
CIAPIN1
ZNF24
ZNF555
PEX7
TMEM242
RGS18
ZBTB26
RABGAP1
FAM227B
DTWD1
TXNRD2
PRDX6
GRAMD4
TTC7B
PADI4
SNX11
CBX1
TMEM229B
BTBD8
ZNF572
CCL24
PPIG
FAM234B
FEM1C
MAP3K4
NUF2
B4GALNT4
FAM193B
APOC3
APOA1
SPATA33
COL18A1
SLC27A5
LGALS12
GPR35
ZNF341
ADAM21
BCAR3
C2orf66
CD2
PAXBP1
PLAAT5
RBBP5
ARHGAP39
AFAP1
APOBEC3B
ZNF143
MTF2
ZNF426
KAT6B
ZNF30
RPS7
TLR2
SNX20
SAP130
FGL2
ZNF514
ZNF324B
MAPK11
RGS21
LEP
ZNF117
VPS13D
SSBP1
TSPAN5
ZNF761
STX16
PDE4DIP
DMAP1
PRRT1B
IFI6
AURKAIP1
NARS2
OR4K17
MRPS16
MON2
LUC7L2
IL21R
FMC1-LUC7L2
FMC1
RPL39L
SAMD4B
GMFG
MINDY3
C2orf88
PRSS38
EDF1
ZNF132
GPRC5C
TEDC1
CRIP1
ACY3
GSTM5
SF3A3
PXDNL
NEMF
TACC1
PUM1
EXOC6
CRIP2
ACYP2
SCCPDH
FAAH
ANP32D
RFC1
ZNF613
LBP
MED23
MYH2
SHISAL2B
MROH7
DTX2
NDUFS7
ST6GALNAC6
UBE2D3
C4B_2
C4B
CEP85
RBPJ
ACP6
CISD2
ZNF627
IL22RA2
INKA2
DDX20
DMXL2
IQGAP1
ZNF165
ADCY10
LMTK2
TYW3
CRYZ
ACAA2
CLIC3
BAAT
C10orf143
NME1
SDR42E1
ST3GAL5
CHD1L
SLC1A7
IGFALS
BANP
COX16
TTLL12
DIP2A
MAPRE2
TMEM70
RPS29
DCP1A
CCDC130
IL36A
PEX3
ADAT2
MDM4
TMEM41A
RPL27
SEM1
GPD1L
AKR7A3
DNAJC25-GNG10
DNAJC25
EIF2D
RABGAP1L
KMT2A
INTS12
GSTCD
LMLN2
B4GALNT3
CEP72
LOC110384692
C4A
YY1AP1
DAP3
YWHAQ
ZNF83
ZNF623
YJU2
SATB1
GALNT1
JMJD1C
IFI35
ZMPSTE24
FRA10AC1
ELOC
PLEC
DCAF10
RBM33
IFT88
TMEM262
CYP17A1
SELENBP1
BAX
MRPL44
SGPP1
PNMA3
ACOX3
NUDT15
FASTKD1
SAMD7
NKX1-1
SNAP47
GDPGP1
CIB1
POLE4
MRPS33
LCN15
METTL7A
SULT1C3
ZNF577
PRAMEF1
HMGB1
NDUFB3
FAM126B
EAPP
NOS3
DSTYK
POLD1
TTC32
CYC1
FDX1
POLR2J3
ZBTB44
SAMD14
NPAS4
ZNF662
NARF
CALD1
ZNF317
USPL1
ZNF594
GJC3
SKP2
LMBRD2
MRPL55
TTC30B
GPAA1
BRF2
C19orf18
HERPUD2
POU2F1
TDP2
ACOT13
STX18
C2orf69
CHST3
TMEM43
CHCHD4
TBC1D19
GLRA1
SCGB1C2
SCGB1C1
NOTCH2
HAUS5
TRIP4
PCLAF
TMCO2
LCN8
ZFP30
GTF2H2
PPP2R3A
CLK4
PNPLA7
MRPL41
SELENOH
TCF25
PROKR2
SLC41A3
CFHR4
TOP3B
SLC24A1
TRMT44
APOL4
CARD6
NRARP
ZNF440
ZNF501
DPY19L4
ENG
PRELID3B
ZNF226
TMEM14C
BTN3A3
ATP1A1
ZNF491
MYOG
MOB3A
IZUMO4
RPL37
CHMP7
TNXB
DRG2
PRKACB
SPATA13
SMARCD2
TMEM106C
NXPE4
RERE
KIF5C
RSF1
AAMDC
ZNF443
FRMPD4
TOR1AIP2
TOR1AIP1
ODF3
COMMD2
PIK3R1
SRPRB
EXOC3
ADCY3
COQ8A
ZNF487
TMPRSS12
ADI1
SLC33A1
ABLIM2
FEM1B
TM9SF1
PAFAH2
RBBP9
FN3K
PHRF1
NSFL1C
EXOSC4
C1orf159
TMEM62
CYBC1
TARS2
LIPA
PSMD8
MRPS31
ZNF614
PSEN1
GTDC1
ZNF561
RSU1
POLR3B
PPIP5K2
FAIM
FKBP5
TFPT
PRPF31
TTC26
RTP5
RPS14
CXCR2
CEACAM21
ACER2
ZNF878
NME4
DECR2
GSTA4
METTL25
CCDC59
TRIP11
ZNF408
ARHGAP1
ALG10B
PPP1R11
SPACA3
PCYOX1
GALK2
LCN6
YTHDC2
TATDN3
NSL1
SEC22B
KDM3A
CLDN16
ANGEL2
REEP3
UTP3
CYP4F22
PDCD7
TAS2R39
SEMA3D
ACBD6
ZSCAN29
TUBGCP4
SFT2D3
SLC44A1
SLC25A51
ZKSCAN3
DNAJB12
GIMAP4
CAT
MAD1L1
GTF3C3
GCNT3
FRG1
IPO4
BAIAP2
VARS2
GTF2H4
THAP11
LOC100289561
TIGD2
EIF3L
ANKRD54
ZNF556
RAD54L2
PAIP2B
EIF3F
MLLT1
BAG3
INTS5
GANAB
VTA1
NMBR
RPIA
ZER1
TMEM68
TGS1
GOLM2
EPS8
IFNAR2
PLA2G1B
ZNF391
ZNF280A
ZKSCAN7
CATIP
VPS37C
ATF7IP2
NRBP2
TMCC3
SMG8
AUH
TIMELESS
NUTF2
CENPT
TM9SF2
LSG1
GTF2H2C_2
GTF2H2C
SUPT7L
SLC4A1AP
CD209
PARP15
REXO4
ADAMTS13
INO80C
WDR36
TBC1D13
RUVBL1
SLC2A7
PRIM1
TESK2
MMACHC
KIAA1549
SNIP1
POM121
DNALI1
NBPF1
ACTL8
ZNF32
FGFBP3
MRPL40
HIRA
LRPAP1
FBXO31
DIO2
GLO1
HLA-E
MYL12A
ACTRT3
HTR5A
ZNF222
BORCS7
RPGRIP1L
FTO
COLEC11
POLR1H
RPL11
CLPP
STAT3
ITGA4
DCLRE1B
AP4B1
TMEM44
CAMK1D
EIF1AD
CST6
BANF1
RMND5A
LRIG2
STAT1
MTERF4
MACC1
ZNF285
RTTN
ZNF350
SAR1B
PARK7
DRAP1
C11orf68
FAM207A
PPP6R1
TEX46
KDM1A
HSD17B6
MTERF1
TEFM
PDCD2
EFCAB10
PLA2G4E
MSRA
BMS1
RILP
ZNF841
C3orf14
CDK5RAP1
TACO1
GINS1
RNF187
L2HGDH
DMAC2L
ZNF829
ZNF568
CCNT1
TTC13
ARV1
JMJD4
KRTAP10-7
SRRM3
SLC9A1
SCMH1
ANK3
MAP3K2
EPB41L2
SNX17
EIF2B4
ZNF891
ZNF10
SCAND1
ZC3HAV1
PRIM2
PSMF1
ESR2
ETFBKMT
TXNL4B
DHX38
TMCC1
ATR
USP30
ORC5
ZBTB45
GBP4
THOC5
PDE6D
COPS7B
ORC4
MBD5
ZNF582
NBN
POLR3E
NPR1
ILF2
NCKAP1L
CCSER2
REN
DEK
PRRC2B
MRPL21
IGHMBP2
CREBL2
PHGDH
TMEM161A
TTYH2
MRPL20
ZNF394
SMIM12
SGCE
PEG10
SLC29A2
RAB30
CCDC97
TRUB2
COQ4
CANT1
NCOA7
WDR11
ABL1
FAM228B
GTF3C5
ZNF772
TNFRSF1B
TMEM222
CYP46A1
TAF12
PDS5B
MOB4
LARP1
PHB
MTRNR2L9
CTSV
ATP5MC2
KANSL3
FER1L5
ZNF502
SETDB1
LPIN1
SUPT6H
SDF2
BACH2
ZNF540
KRTAP10-8
RALBP1
DUS1L
CIPC
ZBTB40
NECTIN4
FBXL12
SMAD1
TXN2
SCAF11
HLA-C
CD47
ATF7IP
CCDC150
EML5
MCF2L2
TP53I3
SF3B6
MRPL1
ZNF513
C1orf167
OTUD7A
MRPS18C
HELQ
FAM133B
CYB561D1
ADNP
TNFAIP8L2-SCNM1
TNFAIP8L2
ZNF571
MTA2
DNM1L
LY6L
HYAL1
B3GNTL1
TMED9
GAS2L3
FRRS1
ZNF207
C17orf75
OAZ3
LSS
HSPE1-MOB4
HSPE1
HSPD1
WDR43
PRKAR2B
AKAP10
SMIM31
SAMD4A
RMND1
ARMT1
B4GALT7
CLTB
DPP9
KLHL20
BNIP1
C1GALT1C1L
SPAAR
HRCT1
MRPS23
KRTAP10-9
C16orf54
CPPED1
CD14
IST1
LGR5
MTIF2
PCP4L1
TUT1
TMOD4
SCNM1
RAX2
LYSMD1
GASK1A
ZNF557
NUP54
GTPBP3
ANO8
ZNF441
COPS4
PDCD6IP
ZNF263
MMP7
MIPOL1
GFM2
KIF2C
PGAP6
ERV3-1-ZNF117
ERV3-1
N4BP2L1
ZNF611
BRWD1
PLEKHM3
ATP9B
NFE2L3
FAM180B
TNFAIP8
NDUFV1
GABPB2
GOLGA5
ZNF300
DUSP16
DND1
AGL
BDH1
ZNF609
HACL1
BTD
UGT1A10
WDR55
STAU1
RMDN2
BCL9
CDYL
RPS20
DDX18
CTNNB1
TMEM79
SMG5
MACROD1
NCBP3
MRPL48
SEC13
EXO5
ZCCHC4
RPL10L
SNRPB
RNASET2
ABR
ANXA2
UBE2H
SNAP29
PI4KA
MAIP1
POLG
GRPEL2
NDUFS3
KBTBD4
NR1H3
ACP2
SERHL2
DNAJC3
CYREN
NAA20
TTI2
CDC73
EPM2A
CPA2
ERN2
ARID1A
ZNF230
ZNF566
MLEC
HNRNPD
CBWD5
C10orf99
TPR
ODR4
ZSCAN25
C18orf21
FAF1
FBXO38
LZTR1
TMEM101
NRL
MAN2C1
DCAF11
OPA1
TLE7
ATXN7L2
CFAP298-TCP10L
CFAP298
ANKRD65
MYNN
CASP4
ZNF189
MRPL50
TMEM114
MRPL30
MITD1
AFAP1L1
RTCA
NAA80
HYAL3
LRP5L
VBP1
HS2ST1
F11R
TPM1
INPP4A
GFI1B
C8orf37
CCNC
PIN4
SLC45A4
DGKZ
CASP10
GPAM
B3GALT2
CBWD3
TTC4
MTRF1
MNAT1
PRPF18
ARL8B
KLRD1
ARL17B
ADRM1
SLTM
KLHDC9
CCAR2
C8orf58
RBM26
NOP16
HIGD2A
H4C8
TMBIM4
TSGA10
RRAGB
CCNB1IP1
TEKT2
HUS1
ADPRS
ZNF398
METTL9
SLC39A13
EFHD2
SMU1
HP
LILRA5
TLNRD1
C11orf49
ABLIM1
PSRC1
WDR3
MYLK
GDAP2
SPSB1
EPRS1
LRRC37A3
CLDN4
EIF3E
TPK1
SPATA22
COX7A2
GMPS
NFAT5
STOML2
TMX2
MED19
ZNF438
RNF126
GGNBP2
PSMD6
PRAMEF14
PRAMEF13
PGLYRP4
PDIA4
INPP5F
LIME1
PRRG2