ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX671999 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◣ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FRG2
FRG2C
ARHGAP39
TMUB2
ASB16
CCDC200
XPO5
POLH
EIF3C
NOC4L
DDX51
SMYD3
CDC34
HIGD1A
ZDHHC18
DNAJC25-GNG10
DNAJC25
ZNF718
ZNF595
SCGB1C2
SCGB1C1
ODF3
RAD54L
GFOD2
C1QTNF12
LAMA5
PDE4DIP
TSACC
FAM177A1
ZNF329
SPATA2
GOLGA6L9
TCF25
GOLGA6L3
NBPF1
TBC1D3F
TBC1D3H
TBC1D3G
PCBP3
C7orf50
PPP2R5A
SLC38A9
RCBTB1
SCGB2A2
H1-7
SPATA6
TBC1D3J
TBC1D3L
TBC1D3K
TBC1D3I
TBC1D3E
TBC1D3D
TBC1D3C
TBC1D3
PPARD
OMP
DET1
GAGE2A
GAGE12H
GAGE12E
GAGE12D
GAGE12C
COLEC11
NACC2
C1GALT1C1L
FKBP11
ELOA2
GAGE12I
GAGE12G
GAGE12F
GAGE6
GAGE12B
AARSD1
RUNDC1
PTGES3L-AARSD1
PTGES3L
ERBB3
SH2D4B
ARL8B
RGSL1
SNX3
RPL32
GOLGA6L10
GOLGA6L4
MTFR1
NUDT3
EDARADD
SLC25A18
LRIG2
HNRNPL
ZAN
GTF3C2
LRTM2
RNASE10
FANK1
HLA-F
SHTN1
PARK7
ZNF28
CLEC12A
VPS37C
VPS11
HYOU1
CCDC38
AMDHD1
SPATA22
ASPA
YWHAE
CYP1A1
VN1R4
SCARB1
TM4SF1
NEU1
H4C12
H4C11
PSPC1
SLC2A11
GOLGA7B
NOTCH2NLC
NOTCH2
OR8J3
C2CD4C
EPN1
INPP5F
TBC1D5
TBC1D3B
MUC21
PRR23D2
PRR23D1
PPP1R3B
SLMAP
GOLGA6L7
ASMTL
ZNF487
TTC17
MST1L
SNX11
CBX1
PRSS41
GAGE2B
GAGE7
GAGE5
GAGE4
GAGE2E
GAGE2D
GAGE2C
GAGE8
PPIG
FASTKD1
PIN4
TTC5
SIMC1
NPAS1
ZNF772
ZNF419
INTS9
HMBOX1
FAM86B2
NUP93
NOTCH2NLB
NOTCH2NLA
NEFH
TMPRSS6
RPL24
ZBTB11
ZNF30
NPIPB6
MYO5C
FIGNL1
UGT1A4
UGT1A3
PRKAA1
DUX4
CYP19A1
XRCC6
ZNF611
DTX2
ZC3HAV1
SCAF11
MACROD1
ELAPOR1
PIGZ
TMX2
MED19
TMEM98
MORF4L1
ARHGEF35
SUPT6H
SDF2
ARHGAP19
FXYD3
RNF135
HADH
SDHAF2
CPSF7
OR8B3
NOP14
GRK4
PTH2
GFY
CEP350
DBNDD1
GAGE13
CD47
SULT1A4
SULT1A3
NPC1
NPIPB9
BAGE5
BAGE4
BAGE3
BAGE
BNIP3L
GMNN
MRTFA
CCS
CCDC87
ESCO1
GTF2A1L
DHRS4L2
ZNF84
RAB3IP
C2orf69
TIMM23B
PARG
PGBD2
PPP2CA
OR9A4
CENPVL3
FLT4
CRELD1
ALKAL1
LIMD1
RGS3
SLC25A13
RANBP17
PGLS
YY1
SARDH
GGT2
POTEB3
POTEB
PPM1D
HERC2
POLD1
HK1
NAPB
DLAT
TULP4
THOC3
PPRC1
ZNF665
SUGP1
MAU2
CHRFAM7A
CCZ1
CS
RANGAP1
UBE2L3
VKORC1
RIMBP3C
RIMBP3B
GINS3
BCKDK
ZC3H7B
FAM156A
FAM156B
GOLGA6L6
CBWD5
CBWD3
CBWD6
CHAD
RSAD1
LONP1
CATSPERD
NOMO1
DGKE
C17orf67
STX17
MUC2
TCEA2
ZNF486
TIMM23
CLINT1
PSAT1
RAB35
ANKDD1B
UHRF1BP1
GPR146
MORC1
MKRN2OS
MKRN2
CZIB
SLC25A32
DCAF13
RFC4
TIGD6
HMGXB3
CCZ1B
ZNF717
CLTA
TMEM159
DNAH3
FIGLA
ALPL
B4GALNT3
RPL11
EML2
ZFP91
LPXN
NBPF15
IQCF2
BRMS1L
ZNF843
ZNF396
ABHD2
HBEGF
LOC100289561
DNAJC3
ASNS
MTMR6
CCNL1
GRPEL1
SPDYE6
PRAMEF33
PRAMEF10
NCBP3
CENPVL2
CENPVL1
PCSK6
RABEP1
SLX1B
SLX1A
BOLA2B
BOLA2
METTL16
LRRC49
THAP10
GALNT10
PAK2
REXO2
TICRR
TENT5B
GRK7
MSX2
PIWIL1
CCN6
SERP1
EIF2A
ACADS
ARHGEF5
GAGE12J
RPS5
ANKFY1
LMNA
RNF225
MYO5A
LYST
FNBP4
TADA1
FBXL5
ENO1
SLC35G1
ZNF888
GSPT2
CMTM3
MACROH2A1
MARS2
LZTS3
NAXD
LOC102724770
DGCR6
SPATA13
TBC1D14
FCGR1A
MOK
BTRC
ARHGAP28
KRT82
PPP2R5C
WDR38
RPL35
ARPC5L
IFI27L1
DDX24
TRPV3
ZNF706
CCN3
SUSD5
TMEM30A
PIK3IP1
C9orf40
COL26A1
AP3B2
LAPTM4B
IL10RA
MS4A1
SLC16A2
CTDP1
DHX15
TEC
OR10AC1
PCDHB2
PCDHB3
CR2
GOLGA8N
ATP8A2
CERS5
ALOXE3
RAB7A
WDR45
H1-8
LRPAP1
WASHC2C
ZNF100
GPR45
USP7
TAF4B
THOC5
CASC3
MTR
PAAF1
ECE1
COA4
NPRL2
CYB561D2
LYN
TMEM115
ARHGAP26
UVRAG
ZNF443
SLC35G5
THOC2
UBE2Q1
CHRNB2
DR1
CRH
PDXDC1
C17orf50
FAM86B1
RAD51D
FNDC8
GPR89B
HERC3
PYURF
PIGY
ORAI1
TMEM41B
LGR6
TTBK2
CTSL
MAPKAPK3
CISH
MXD1
OR52A1
ZNF346
ZFP2
LOXL2
OR52A5
NOTO
GTPBP4
LMLN2
HMGB1
USPL1
BOLA2-SMG1P6
CHGB
PTPA
CRAT
SEC61B
ROPN1
HIC2
RMDN2
SEMA4F
M1AP
ZNF823
PLPP5
ILRUN
CALCOCO2
IP6K1
JPH4
MAGEA8
WDR36
RUVBL1
TESK2
MMACHC
UBE4B
EEFSEC
CHAF1B
ZNF451
YAE1
NDEL1
MACIR
TIMP4
XAGE1B
XAGE1A
JMJD1C
VBP1
YWHAG
SRGAP1
HNRNPM
MATN2
MCM6
VASH2
EMP2
POM121C
SLC25A28
CEP135
PHTF2
TMEM60
NAP1L3
FAM133A
TRIM37
BLOC1S2
ZNF384
CWF19L1
MON1A
ADCK1
SPDYE5
RASEF
RACGAP1
SCOC
UBR7
GON7
HACD3
MCTP2
PRKAR2A
GPC3
LMTK3
TMEM163
ARL4D
DUSP16
ZNF416
POLDIP3
HILPDA
SERBP1
ZIK1
PDK2
RNF149
MEGF9
POTEH
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
PKP3
TXNDC15
PMEL
RAB5B
CDK2
MIS18A
FH
SOCS3
UBALD2
COPZ2
ROPN1B
TPT1
FAM111B
ZBTB8B
FAM234B
RPS7
SHISAL2B
ERN2
REM1
DEFB124
S100A2
SNRPD3
GUCD1
C5orf34
TMEM202
PDGFD
IL17RA
PACC1
SDHAF1
PLCD1
ZNF354B
KBTBD8
CEP112
RNF7
IPO7
TMEM63B
MRPL14
UBE2L6
SLC5A6
CAD
ATRAID
DLEC1
LRRC8C
RPN2
MROH8
CFAP206
NHLRC1
PIANP
CASR
FBXO39
RPGRIP1L
FTO
CEP126
ANGPTL5
POLD3
SCNN1D
PLPPR2
NF2
MFSD11
SRSF2
FAR2
CYTH2
PLAG1
CHCHD7
RAB31
LRRN4
RNF207
RTP3
LTF
RPL22
IFNGR1
ANKRD36C
C8orf76
SNX27
ZXDC
NEDD4
ZFYVE27
ZBTB39
ZNF500
INO80
CDCP1
FLNB
TTC12
IRF8
NUTM2G
FFAR4
KRTAP2-2
KRTAP2-1
KRTAP1-1
NCKAP1L
MOB4
CRTAP
ZNF778
SEMA4B
SLC7A6
JAK2
POMK
HIF1A
DEPTOR
TMEM178B
EIF3F
SRSF7
RABGEF1
ARHGAP9
GMEB2
OR6J1
ZNF672
INSL6
ZFP37
NCOA5
KCNJ9
SYT15
LOC102724488
DYNLL1
ALS2
MICOS10-NBL1
MICOS10
SRSF9
ADO
RND3
SPINT1
CT47A9
CT47A8
CT47A6
CT47A5
CT47A4
CT47A3
CT47A2
CT47A12
CT47A11
CT47A10
CT47A1
NT5C3A
RHOG
PSAP
TBPL1
STAG3
GPC2
TRPC4AP
TTC9
CD68
LOC100996842
CSRNP1
MPDU1
RPS4X
CAPN7
EIF4A1
SOX15
RPS27L
FAM76A
GAL3ST4
FUCA1
USP33
TOR3A
DUSP15
PJA1
CHRM3
CBX7
RIPK4
IVD
XBP1
CTNNAL1
RETNLB
BMP8A
METTL8
DCAF17
SPATA33
ZNF514
CREBL2
TMEM222
LUC7L
FAM234A
ALDH3A2
EDEM2
ZNF2
DMTF1
DYNLL2
TNIP1
SLC22A5
GTF2A2
BICD1
SLC30A10
KRI1
CDKN2D
ERICH2
B3GALNT1
CDH22
MTERF1
LHFPL4
ARRDC2
ANKRD36
SMG1
DPY19L4
DGKQ
HDAC1
ERCC1
SAXO1
ZBTB43
RAB24
PRELID1
KCNIP2
COPS7A
UBXN4
MXD3
DNAJB9
RRAGA
NPTN
ACO1
CPEB3
GNE
THAP5
DUSP22
SLC13A3
HACE1
RIPK2
C6orf62
PTBP3
GNPNAT1
UBA2
EID1
ATCAY
FIP1L1
SCYL2
DEPDC4
BVES
MTMR3
IGSF8
TMEM47
CLDN4
CEP120
ZNF846
RTN4
METTL27
ANGEL1
TMEM239
C20orf141
STK40
PJA2
CAAP1
CLCN5
RDH16
DIXDC1
DLC1
GMFB
TRIM15
MRPL57
NANOGP8
APOC1
DNAJC13
NOMO3
ABCC6
SLF2
COPS3
OPTN
CCDC3
SPACA5B
HAAO
PRRG4
CLDN1
MAL2
STMN1
SLC7A2
NODAL
PSMD8
ATP6V0A1
SH3BP5L
MZF1
RASL11A
EFR3A
PRR30
PREB
UHMK1
UBD
GALNT3
FBN1
TSKU
SUMO3
USP3
MIER1
DNAI4
NEMP2
NFYC
FGD4
FEM1A
TMEM263
MND1
PPM1A
LSM6
DNAAF2
FARP2
CSNK1D
UCK1
MGLL
DUSP3
CFAP97D1
P3H2
C1orf216
CORIN
C8orf34
ZNF287
MEX3A
ZNF134
ARL17B
ARL17A
KIAA0319
NGRN
SAFB2
SAFB
RAB4B
MIA
C14orf28
RAB22A
ICA1
MAPKAP1
UQCRFS1
NEK5
SEC16A
C9orf163
SYT13
PRDX3
RTL10
GNB1L
RWDD2B
SBNO1
TMOD3
CCDC136
SPDYE14
SPDYE10P
RANBP6
FAM189B
CASTOR2
KIAA2026
SCAMP3
ZNF75A
TIGD7
PPP4C
RASL10B
GPRIN1
MAN1A1
CST3
SH3D21
PHC3
KCTD8
BMPR1A
SCAND1
ARL2BP
UNKL
C16orf91
TAF5
LRRC58
KIF2A
ACAT1
GSTT2B
SLC36A1
BTF3
GSTT2
DDTL
DDT
NF1
KTI12
MEX3B
DCAF4L1
SLC30A9
GALNT7
CFDP1
SLC7A1
RLN2
TEX45
FOXD4L5
NPAP1
FAM193B
CLK4
TM9SF1
SLC25A51
IPO4
MAP3K2
GAS2L3
SYAP1
RAB1A
RIC1
IREB2
CORO2A
CTPS2
SLC4A8
GHITM
L3HYPDH
JKAMP
GALNT6
HORMAD1
TTC28
SMARCE1
EFR3B
DDX17
ANGPTL4
SIRT2
NFKBIB
FOXRED2
PPP1CB
POLI
SEC11C
VANGL2
KCTD13
POLR3H
TRERF1
RPRM
AGO2
KCNMB4
NPY
USP44
BICC1
WTIP
PDLIM3
BRSK2
ZNF786
SNX18
GLS2
PCDHA2
PCDHA1
PANX2
FAM153B
SEC14L2
RNF215
CT45A10
MID1
AMPD3
DYNC1H1
RIMBP3
PSMG2
CEP76
NOXRED1
AACS
ACVR1B
PODXL
ACTR3B
TAMALIN
ZNF782
HBZ
CTAG1B
CTAG1A
GTF2H2
SNX17
EIF2B4
ZNF513
HPCAL1
EDNRA
C10orf53
PKN2
CBR3
RBCK1
SEC61A2
FBXO11
MXI1
ERMP1
COX5A
OSBPL1A