ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976672 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◣ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

IKZF3
MTRNR2L8
MYEOV
ERBB2
MTRNR2L2
MSH3
DHFR
TES
MIEN1
GRB7
ARID3B
KIF5C
TMEM199
SEBOX
POLDIP2
CRBN
MTRNR2L1
TOMM22
ERAL1
PNMT
TCAP
GRHL2
RGPD2
RGPD1
POLR2J3
CD300LF
TXNRD1
UBE3B
SFSWAP
STARD3
PPP1R1B
STAT6
PGAP3
MRPL45
ELF3
GET3
IRS2
PSMD3
MTBP
MRPL13
UNC13D
SSH3
TRA2B
RBM48
PEX1
SLC45A4
ISY1-RAB43
ISY1
RBBP8NL
TSR3
GNPTG
TRIM29
ERAP1
TET3
MED11
VPS50
HEPACAM2
ESRP2
HEXA
CARD16
SPAG16
SCHIP1
HES1
LYPD6B
SEMA3B
LSMEM2
GPRC5A
BCKDK
KAT8
LZTR1
DUX4
GFM1
POLR2J2
TJAP1
NOL4L
TXN2
POLR2J
CD55
ART1
CYP2A13
UBE2I
SOCS2
BHLHE40
YAP1
SLIRP
ALKBH1
TOP3A
SMCR8
PDAP1
BUD31
SUPT7L
SLC4A1AP
IL1R1
APOBEC3B
MRPS15
SUPT6H
SDF2
FNTA
LTBP2
C1orf174
MOCS3
DPM1
SRI
LAMP1
TMC7
DMAC2
ERICH4
ZNF789
ATP5MF-PTCD1
ATP5MF
PSMD1
NAGPA
TRIB1
AXL
GNG4
MRTO4
EMC1
RXRA
RPTOR
UPK3B
SAP30BP
RECQL5
GRAMD1C
ID1
SPIRE2
GLTP
OSBPL2
SPIDR
THAP7
MED6
ERCC1
SLC25A45
FRMD8
RPL23A
RAB34
PROCA1
TLCD1
NEK8
C8orf33
KRT31
SLC35B1
CCDC97
STX16
GSR
LRRC47
SPATA25
NEURL2
CTSA
ZSWIM1
TNS3
ZNF335
TRMT2A
RANBP1
PTK2
PHAX
ALDH7A1
ATG9B
ABCB8
ELFN2
C19orf33
TAS1R1
NOL9
DDX23
EIF3H
SALL4
RBBP5
IDH3B
UVRAG
KRT1
SUMF1
MB
CSRNP1
RTF2
ATG14
NGDN
EXOSC5
BCKDHA
NCBP2AS2
NCBP2
APMAP
KLF6
ZNF585B
ZNF383
FZR1
DOHH
DNAJC11
TRAF4
NUGGC
ELP3
POLR3F
DZANK1
TJP2
ZNF408
ARHGAP1
MTRNR2L9
RHOD
HS3ST6
UBQLN1
ANGPTL4
FOXJ1
RMND5B
DUSP2
ASTL
ZNF830
CCT6B
DYNLRB1
UNKL
C16orf91
PPWD1
CENPK
LTO1
TMEM258
FEN1
CYP27C1
NECTIN4
SPINK1
OSBPL7
MRPL10
LRRC46
SCRN2
RARB
TMEM208
LRRC29
FAM162A
CCDC58
RCE1
TSFM
SLCO4A1
ECHDC1
NOL8
CENPP
TLE3
PALB2
DCTN5
ZZZ3
MMP13
HAGH
FAHD1
MAN2C1
C8orf74
NKD2
NOM1
SEPTIN9
PSMG2
CEP76
KMT5B
MUC20
C5orf51
ZBTB7C
CDKAL1
ZNF608
JMJD7-PLA2G4B
JMJD7
PLA2G4B
ZGPAT
ARFRP1
SAMD10
PRPF6
PSMB7
IRF2BPL
TMCO6
NDUFA2
IK
HNF4A
KALRN
BCAS1
TCTEX1D4
PLK3
BTBD19
STYXL1
SENP5
LDHD
PLA2G2A
RPS26
SLC25A53
FAM199X
ZNF165
OR1F12
RDH5
ITGA7
BLOC1S1
U2SURP
SEC61B
ALG2
INO80D
SLC2A8
SPNS1
LAT
RIOK2
CASC3
RARG
TATDN3
NSL1
SMN2
SMN1
SUPV3L1
TBRG4
DDX46
DIABLO
CDKN1A
MEOX1
YJU2
NAPB
SART3
ISCU
WASHC5
NSMCE2
GABRR1
LIPK
SQSTM1
ZNF514
ZNF2
VPS52
RPS18
B3GALT4
TXNL4B
DHX38
SPARCL1
SENP1
PFKM
C5orf63
BRMS1
RIN1
TRMO
TPRN
TMEM203
NDOR1
RPS5
UBAP1
BRPF1
SPINT3
IZUMO1
FUT1
FGF21
GADD45A
NVL
METTL2A
CENPBD1
RAE1
MTRNR2L3
RAD9A
PPP1CA
BRWD1
FASTKD2
SNRPE
TPST2
UBE2M
CHMP2A
MAMDC2
TMEM40
PRKRIP1
PRKCD
VIRMA
NDUFA9
AKAP3
TRIQK
NCAPH2
LMF2
PFDN1
APOBEC3H
REN
SLC39A9
ERH
BIRC3
LURAP1L
ZNF17
MRPL58
TFPT
PRPF31
GSN
TRUB2
COQ4
DPP3
CCDC174
USHBP1
BABAM1
BCL3
NUP107
HR
SEMA5B
REEP4
SF3B3
COG4
REXO1
POLD1
NR1H2
CEP162
WSB2
ZNF576
IRGQ
MAP3K7
NSA2
GFM2
DERL1
ZSCAN25
KIF25
EPHB3
EPS8
TMEM63A
OAZ3
MRPL9
PPP1R11
OXNAD1
DPH3
RNF39
SLPI
CCDC124
ANXA2
HUS1
SETD1A
ORAI3
NOTCH3
PTP4A1
SERPIND1
THUMPD1
RAPGEF3
RDX
GRAMD2B
CXCL5
ENPP3
MED23
MRPL53
MOGS
MYBL2
PPIL4
ARMC1
CCDC59
FAIM
WDR53
FBXO45
ZSCAN22
ANXA10
KLF9
OSER1
TRMT1
NACC1
PSME3
BECN1
CPA1
DGAT2
ZFP42
ATP6V0D2
CARD18
SLC39A4
CPSF1
API5
TOX2
SMYD1
NUP214
MRPS7
MIF4GD
GGA3
SF3A3
TSN
ZNF436
RRNAD1
ISG20L2
PLEKHN1
NOC2L
KLHL17
LGALS8
WDR24
STUB1
JMJD8
ATP1A2
STX1A
EDARADD
GTPBP4
CBLL1
LIMA1
VGLL4
GPATCH3
GPN2
STMN3
RTEL1
SMIM41
ATG101
ABT1
VAC14
FAM222B
NTSR2
ASB2
MUC3A
LRFN4
NIBAN2
MTUS1
PUM2
C20orf85
NOL11
UBIAD1
MPPED1
UPP1
CCNT1
GRAMD1A
DNAH5
LAMTOR1
ANAPC15
BMS1
FOS
SCARB1
DDX49
COPE
ENOSF1
SMPD4
MZT2B
SKIL
CDC6
MESP1
MAFK
CNKSR3
FAM83A
DNAJC30
BUD23
SEC13
PPP1R37
ZG16B
COMMD2
MAPKAPK5
ERGIC2
ATF1
H2BW2
CLDN4
AMN1
TRIM65
MRPL38
HOOK2
CLPTM1
APOC2
JUNB
PRSS22
FLOT2
DHRS13
RNF213
SETD1B
RHOF
MRPL3
ZNF461
GATB
RPLP0
GCN1
AGPAT2
BCL9L
RPL26L1
AGAP3
TMUB1
FASTK
SCARF2
NOL10
NUP85
FUBP3
COLEC11
NBEAL2
CCDC12
SART1
SLC25A10
MRPL12
GPD1L
EIF2D
PTPRR
TUFT1
RWDD1
CDK12
CCDC88B
TCF3
ABCC10
RNPEPL1
DUSP28
ANKMY1
PLEKHH2
TPD52L2
ABHD16B
FBXW2
LPCAT2
CD36
GOLGA7B
ALKBH3
PDC
PSKH1
NRN1L
CDKN2AIPNL
ITGB5
KMT5C
GTF2IRD2B
HTRA2
DQX1
ICE1
TRIP4
PCLAF
ZCCHC4
PDRG1
PSG9
CZIB
KRR1
KYAT1
FADD
LRRC8A
C7orf65
FOXS1
APCDD1
OSCAR
NDUFA3
MFN2
PSMD7
DOK7
SMG8
NDUFB5
MRPL47
XAB2
STXBP2
PCP2
CNPY2
TOMM6
PRICKLE4
FRS3
ZFYVE26
RAD51B
IRF6
CGGBP1
C3orf38
EPB41L1
TIMM22
NFKBIA
FBXO32
AP5Z1
OBSL1
INHA
WDR97
MAF1
CYC1
SETD3
CCNK
MAD2L1BP
GTPBP2
UQCRQ
LEAP2
GDF9
RSPH9
BIRC2
PRR3
GNL1
TM4SF1
VPS33A
DOK3
DDX41
GSC2
ZNF507
PHB2
NT5C
KAT6A
PNO1
WNT7B
PEPD
TIMM23
IL1RN
SLC27A5
ZBTB45
CMIP
NAB2
GTF2H3
EIF2B1
SMIM12
PUS10
PEX13
TFAP2C
MRPL21
IGHMBP2
KLK6
PCYT1A
EPPK1
SLC39A2
METTL17
NOP58
TMED2
CDK11A
TM4SF4
EIF2S1
ATP6V1D
SNRPC
SRP9
ZNF668
ZNF646
MRPS11
MRPL46
INTS1
CYP24A1
ZNF256
DHRS3
NOXO1
PMEPA1
PLD1
COX16
AGTPBP1
MEAK7
TBL3
RPS2
RNF151
PARG
D2HGDH
DUSP6
RGS14
LMAN2
KYNU
FAM187A
EFTUD2
CCDC103
ADAMTS16
NDST1
PTPRB
TTI1
RPRD1B
COPS8
ZFP62
GPC1
PSG1
LRRFIP2
RALGDS
ARID2
BCAR1
SLC7A6OS
PRMT7
TRIOBP
TRIM16L
PLEKHG3
METTL27
PDE6D
COPS7B
TMEM270
NFKBIZ
CD63
ATF3
RGS20
ATP6V1H
TUBG2
PLEKHH3
DNAI2
SNRNP200
LRATD2
PISD
POLD4
SUGCT
MPLKIP
TCERG1
PSG5
PLXNB2
STK24
TUBD1
RPS6KB1
BIN3
IER3
FLOT1
CACTIN
C5orf15
SERPINH1
TAGLN2
PPAN-P2RY11
PPAN
ANGPTL6
NUS1
DIDO1
PEX26
OST4
EMILIN1
GID8
P2RY11
VEGFA
BANP
FASN
CA5A
MYLIP
NDUFAF5
ESF1
MUC4
MAGOH
TMEM123
PARP4
PMPCB
CDK5RAP2
TMEM207
PIK3C2B
KRTAP5-6
RARS1
GJB5
GJB4
CLDN24
CLDN22
ZNF655
FAM200A
SAMM50
TBL1X
TANGO2
ARVCF
MCM7
AP4M1
SRP68
ZACN
GALR2
RAD51AP1
C12orf4
PLEC
GTF3C5
TPGS1
FOSB
TRIM4
GJC3
CLCF1
CASP8
CSTF1
AURKA
GOSR2
PIM3
MDM4
YIPF3
POLR1C
LRRC73
TFIP11
PRCC
CDK11B
P3H4
FKBP10
EIF2B2
ECH1
EIF1AD
CST6
BANF1
COL9A3
TMEM147
RRP36
MEA1
KLHDC3
CTNNBL1
FSCN1
UQCRHL
HOXA3
HOXA4
HOXA5
BBS1
SRD5A1
RBM22
ZNF865
ZNF524
FIZ1
SSNA1
ANAPC2
KRT17
TEKT2
ADPRS
NPAS2
KIAA0895L
EXOC3L1
E2F4
ELMO3
TBL2
COA8
BAG5
ZNF142
BCS1L
DGCR6L
EFHD2
NMNAT1
LZIC
METTL21A
S100A11
SH2B1
MRPL1
INKA2
DDX20
RAMAC
MORF4L1
ALDH3B2
PAN2
IL23A
TSC22D4
NYAP1
GABARAP
PDXK
PHF23
DVL2
ALDH18A1
HNRNPA2B1
CBX3
GET4
SLC39A10
ELP5
CTDNEP1
EPC2
WDTC1
DDX17
EIF4G2
NUDT3
STRBP
SLC25A25
NAIF1
SEPTIN7
WASHC2A
RNASEH2C
KAT5
WASF2
WASHC2C
UBE2Q1
CHRNB2
KCNK4
GPR137
BAD
TSPAN31
MARCHF9
CDK4
GSK3B
ATP6V0D1
AGRP
RSF1
AAMDC
MSMO1
FRG2C
RPGRIP1L
FTO
DAGLA
MDM2
PTPRF
RPS6KC1
EFNA3
WBP2
MTHFR
CLCN6
LY6L
SYNGAP1
PHF1
CUTA
ZBTB7B
LENEP
CLCN7
SMARCD2
FRG2
USP49
DDX42
CCDC47
SRSF1
RPUSD4
FAM118B
GBA
ILF3
SPTAN1
SERPINI1
PDCD10
PRR5L
COMMD9
UAP1L1
MAN1B1
UBE2H
ATP6V1G1
MACC1
ATG16L2
RHOBTB2
FAM72C
IRF2BP2
PIP4P1
OSGEP
AVEN
APEX1
SRGAP2B
FAM72D
SLC35A5
ATG3
ATAD2
EN2
PGLYRP4
SKIDA1
ZNF358
MCOLN1
FANCA
INO80C
PCIF1
AURKAIP1
MYCL
PPCDC
RIPOR3
SLC25A11
RNF167
PFN1
DAZAP1
PDGFB
FCGR1A
PURB
SRGAP2
FAM72A
PHRF1
FXYD3
RGS3
XPO7
DOK2
KMT2E
CLN3
APOBR
HPS5
GTF2H1
BRF1
PDZK1IP1
TPP1
TAF10
ARID3A
TMEM205