ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976674 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◣ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

IKZF3
MTRNR2L8
MTRNR2L2
MSH3
DHFR
TMEM199
SEBOX
POLDIP2
MYEOV
MIEN1
GRB7
ARID3B
ERBB2
KIF5C
PNMT
TCAP
SLC45A4
TES
ERAL1
MTRNR2L1
TET3
IRS2
CD300LF
C8orf33
RBBP8NL
DUX4
RGPD2
RGPD1
UBE3B
MRPL45
SFSWAP
POLR2J3
SLC35B1
SSH3
POLR3F
DZANK1
RARB
PSMD3
BHLHE40
MED11
GRHL2
PGAP3
CRBN
VIRMA
CLPTM1
APOC2
C1orf174
CDKN1A
TRIM29
SCHIP1
POLR2J2
RDX
ASB2
APOBEC3B
STARD3
PPP1R1B
TXNRD1
MUC3A
RBM48
PEX1
ERCC1
MMP13
REN
SPIRE2
MAMDC2
TFPT
PRPF31
LTBP2
TSR3
GNPTG
SERPIND1
CD55
ART1
HAGH
FAHD1
ISY1-RAB43
ISY1
FOXJ1
POLR2J
TRMT1
NACC1
STAT6
KRT31
TRA2B
ATF3
RBBP5
LZTR1
TMC7
PSMB7
NECTIN4
RRP15
ESRP2
SPINK1
UBQLN1
LAMP1
UNC13D
UNKL
RMND5B
C16orf91
LPCAT3
HES1
PISD
FLOT2
DHRS13
TSFM
ID1
GATB
MTBP
MRPL13
U2SURP
TOX2
MTRNR2L9
TOMM22
THAP7
VPS50
HEPACAM2
SQSTM1
VAC14
PLEKHH2
TNS3
NAPB
STX16
IRF2BPL
JMJD7-PLA2G4B
JMJD7
PLA2G4B
MRPS11
MRPL46
SKIL
SNRPE
PHAX
ALDH7A1
RAD51AP1
C12orf4
GPRC5A
NDUFB3
FAM126B
ZNF576
IRGQ
RETNLB
SPIDR
SALL4
SOCS2
ZNF585B
ZNF383
RASEF
PUM2
RAPGEF3
SMN2
SMN1
TBRG4
SLIRP
ALKBH1
CCDC88B
NUGGC
ELP3
NDUFAB1
DMAC2
ERICH4
CYP2A13
MRTO4
EMC1
PLLP
ABCC10
SLCO4A1
NAGPA
IDH3B
CARD16
TMCO6
NDUFA2
IK
TRMO
TMEM178B
SENP1
PFKM
KRT80
ZNF608
HEXA
ITFG2
ELF3
LYPD6B
DNAJC11
YAP1
DDX46
SLC25A53
FAM199X
MFSD10
PTPRB
SAP30BP
RECQL5
CLCN5
SUPT6H
SDF2
SLC25A45
FRMD8
LSG1
RECQL4
LRRC14
MFSD3
GPT
FOXO6
SERP1
EIF2A
POM121L12
RPS26
RGS3
ZSCAN25
TRIB1
UBE2I
H2BW2
RXRA
DHRS3
SUMF1
RAB3IP
DDX23
TTC31
CCDC142
POLD4
ZNF17
DOK3
DDX41
SRI
CLDN9
CLDN6
ELFN2
RIOK2
GFM1
TJP2
SSUH2
CHMP7
C19orf48
FAIM
PRKRIP1
BRIX1
ZNF3
COPS6
PSG1
TRAF4
RARG
ZZZ3
OSER1
PRKAG2
EPHB3
LOC102724770
DGCR6
GABRR1
POMZP3
CDKAL1
DIABLO
NPM2
OSBPL2
PLEKHG3
OR9A4
SUPT7L
SLC4A1AP
SLC27A5
WSB2
ZBTB45
AGTPBP1
PHLDB2
MOCS3
DPM1
ATG14
MTUS1
SUPV3L1
CYP27C1
HR
REEP4
TIMM22
CCDC102B
TOP3A
SMCR8
ZMYND8
RGS14
LMAN2
HACL1
BTD
DENR
GRAMD2B
STYXL1
PCNP
SPAG4
HUS1
NIBAN2
MED20
BYSL
NEUROD2
GADD45A
DOK7
PRSS22
MTO1
CGAS
GET3
ATP13A3
EIF3F
METTL2A
SMYD1
CASC3
SPHK2
RPL18
FAM83E
RALGDS
TBL1X
SLC16A5
PPP1R11
METTL2B
POLR1H
ATAD2
KRT1
PMEPA1
DPP3
STON2
BTNL8
ZNF865
ZNF524
FIZ1
ZGPAT
ARFRP1
GNG4
IRF2BP2
PSME3
BECN1
KLF10
TFAP2C
PPWD1
CENPK
TTI1
RPRD1B
PRR3
GNL1
ZBTB7C
KYAT1
LRRC8A
MAPKAPK5
IL36B
FRG2
PSMD1
EIF3H
FAM133B
RNASEH2C
KAT5
ZNF789
ATP5MF-PTCD1
ATP5MF
FSCN1
IL1R1
KIF25
PHF3
HOOK2
JUNB
MRPS10
PTPRU
MECR
PIM3
VPS33A
UBAP1
DNAJC30
BUD23
RPLP0
GCN1
ZNF830
CCT6B
TIMM50
ZC3HC1
CCDC97
RPL26L1
MEOX1
CCDC59
ZSCAN22
SH2B1
DLC1
TUFM
RAE1
MTRNR2L3
LIMA1
WASHC5
NSMCE2
SNCAIP
KRR1
NGDN
EPB41L1
GTF3C5
GTPBP4
SPATA25
NEURL2
CTSA
FNTA
TJAP1
HEMK1
C3orf18
MIEF1
C5orf63
RCE1
CDK5RAP2
KALRN
TRIM16L
NFKBIA
ATP6V0D1
AGRP
PNO1
THBS3
MTX1
NUP214
CSRNP1
TMEM262
NVL
HS3ST6
ECHDC1
DGAT2
CYP4X1
SLC2A4RG
LIME1
B4GALNT3
MUL1
DYNLRB1
LGALS8
TXN2
USP30
SMG7
ECH1
ZNF514
ZNF2
TMEM208
LRRC29
BMS1
AP5S1
ZNF165
OR1F12
AXL
PTPRR
BIRC3
PLA2G2E
RPS12
TPD52
ZNF335
CDK12
MED1
PDCD6IP
CCDC57
ITGB5
SPAG16
STMN3
RTEL1
QRICH1
SMIM41
ATG101
UPK3BL1
SPDYE2B
SPDYE2
FOCAD
ZNF579
BAIAP2
EIF1AD
CST6
BANF1
PLA2G2A
MIDEAS
BRF2
CHRM3
MACROD1
BCL3
TIPARP
WDR53
FBXO45
COLEC11
ECHDC3
ANXA2
ERAP1
CXCL5
ASB6
SKIDA1
RIPOR3
MLLT10
DBNDD2
GLTP
C8orf74
PLEC
LYPLA1
LMNA
LSM5
AVL9
FCF1
AREL1
FRMD7
HCAR2
SPSB3
MRPS34
EME2
NME3
KLF9
TSN
NKD2
MRPL1
MED6
TBL1XR1
RPL23A
RAB34
PROCA1
CD109
MARVELD1
METTL27
URM1
TMEM270
TLCD1
NEK8
GLCCI1
LANCL2
HSPB1
TTC17
PSMG2
CEP76
PPP1R35
ZCWPW1
MEPCE
PHB2
ADGRG7
TMPRSS11A
ZBTB7B
LENEP
TAS1R1
NOL9
RPS5
MAP3K7
TSR1
SGSM2
ZNF408
ARHGAP1
TRIP4
PCLAF
STX6
BCAS1
SEC13
HSPBP1
BRSK1
HOXA3
HOXA4
HOXA5
ZFHX3
MDGA1
GSR
RDH5
ITGA7
BLOC1S1
MB
BNIP3L
S100A2
RAD52
TNFRSF10B
GTF2H3
EIF2B1
EIF3E
MRPS22
RPL30
SPNS1
LAT
TRIOBP
PLAGL1
SEMA3B
LSMEM2
MYL12A
VCAN
RBM42
MYL12B
USP39
C2orf68
BCKDK
OPN1MW3
OPN1MW2
OPN1MW
KAT8
STX1A
C19orf33
VPS11
BNIP1
ERGIC2
PDE12
MMP10
RALYL
PGGT1B
TMEM205
RAB3D
CCDC159
TACC1
ATP6V1C1
GSC2
TCF24
DNAH5
UTP20
DOT1L
RRNAD1
ISG20L2
UPK3BL2
TMEM95
KCTD11
NOL4L
KLF6
ADGRL1
PUS10
PEX13
ANKK1
ZBTB38
CDC6
EXOSC5
BCKDHA
C7orf65
RINT1
PUS7
UQCC3
LBHD1
UBXN1
PBX2
GPSM3
SDC1
AGER
NDUFB5
MRPL47
SYT12
MS4A5
TRMT2A
RANBP1
YJU2
RARA
NUDT18
MRPS7
MIF4GD
GGA3
NME1-NME2
NME1
PAXBP1
EIF5A2
SF3B3
COG4
PDE6D
COPS7B
TBC1D17
PNKP
AKT1S1
WDSUB1
ANXA3
COG2
EBPL
NUDCD3
OAZ3
MRPL9
FEM1A
FIS1
CLDN15
ZFP64
PHRF1
SCARB1
MED4
ERLIN2
SEMA3F
PTPN2
SEMA4B
PPP1R13B
CCNDBP1
FOXA2
UVRAG
DAZAP1
MRPS15
TMEM63A
EPB41
NOTCH3
MLX
HSD17B1
COASY
ZNF696
IQUB
SH3GL3
PIM1
BANP
CA5A
MBD6
DDIT3
LRFN4
NDST1
PES1
TLE3
CAPN14
SETD3
CCNK
MALL
POLR3B
ZNF703
OR6B2
NDUFA10
ZCCHC4
ZNF436
AMOTL2
MAD2L1BP
GTPBP2
AQP6
AQP5
ITPKC
COQ8B
PTAFR
LDHD
PPP1R37
TTC32
SSNA1
ANAPC2
TPST2
FOXS1
YIPF3
POLR1C
LRRC73
COL9A3
GPATCH3
GPN2
HNF4A
ZRANB2
ANAPC5
TNFRSF12A
THOC6
HCFC1R1
EVPLL
TLL2
IRX2
C5orf38
BUB1B
ABCC3
FAM162A
CCDC58
CDH1
RBP2
AURKAIP1
ATG9B
ABCB8
PPL
SLC25A11
RNF167
PFN1
C5orf51
GP1BA
CRTC1
ENO3
KYNU
CNPY2
RBM19
IPO11
DIMT1
SYT1
ONECUT3
KCNAB1
KMT2A
CLPB
SNRPB
KCNIP2
CD63
VGLL4
LARP1
STK24
MRPL48
PIK3C2B
MICAL2
TMEM123
SBNO1
PMPCA
ENTR1
SETD1A
ORAI3
SPTLC2
PRKAR2B
HTRA2
DQX1
NCBP2AS2
NCBP2
TNFRSF1A
SLX4IP
MKKS
RPTN
NUDT5
CDC123
PHF5A
ACO2
ISG20
ASH2L
ARHGAP30
TLR5
SMIM8
GJB7
UXS1
NOXO1
CPA1
RPS14
TBL3
RPS2
RNF151
TCERG1
CDC23
PPCDC
RWDD1
TXNL4B
DHX38
CWC25
WDR36
CARD18
TMCO1
CYP26B1
PPIL3
NIF3L1
OSBPL7
MRPL10
LRRC46
SCRN2
MRPL21
IGHMBP2
TMEM207
HDAC7
RBPMS
TGFBI
TBL2
BIRC2
RTF2
CCNT1
INTS1
PTP4A1
SNRPB2
RBX1
SOX4
CDK5RAP1
TEKT2
ADPRS
OR2T1
PTPRF
GRAMD1A
COX16
SART3
ISCU
MEAK7
TAGLN2
ADAMTS16
SLC2A8
TPRKB
ITGA3
UPP1
GPC1
TUBG2
PLEKHH3
LY6D
KPTN
DDX49
COPE
SEMA6A
PWP1
UBE2H
FAM83A
RPS11
RPL13A
AP5Z1
IER3
FLOT1
TPRN
TMEM203
NDOR1
GNA13
ACP3
LGALS7B
CDK11A
DNTTIP2
DNAI2
CTTN
SPTBN2
CWF19L2
CLDN4
RAB40C
OR2M2
MCC
SEPTIN9
MTHFR
CLCN6
PTK2
NUP107
TSC1
GFI1B
CSTF1
AURKA
VSIR
DUS2
DPEP2NB
DDX28
GRK7
TAF6
MBLAC1
CNPY4
RHEBL1
EIF2S1
ATP6V1D
KMT2D
KCNJ14
GRWD1
RP1L1
KCNK15
PDAP1
BUD31
PRKCD
UCKL1
NPAS1
MRPS26
GNRH2
NAB2
PTPN12
E2F8
CD86
UPK3B
BCAR1
PLXNB2
TMEM41A
ANXA1
IL1F10
WDR97
MAF1
CYC1
PEPD
WDR70
NUP155
MIDN
ZMAT2
HARS2
HARS1
LONRF3
TGIF1
PSMD5
METTL1
EEF1AKMT3
CYP27B1
LRRC23
TMBIM1
DAB2IP
MRPL40
HIRA
NAPRT
MROH6
GTF3C3
C2orf66
NDUFA9
AKAP3
POLD1
NR1H2
OR2W3
PCID2
CUL4A
UROS
BCCIP
CASP5
SRD5A1
HSPB7
CLCNKA
TONSL
ENOSF1
SRARP
KMT5C
LGR6
SIGLEC15
PARP4
DYNC2I2
SNRPD2
QPCTL
TCF7
LIF
FAAP20
FADD
ZNF398
ADPGK
KCNJ15
GRAMD1C
RHOD
ERCC5
RAB5IF
SPRED2
EPS8
LNX1
LTO1
UTP3
STK36
RNF25
SPAG9
TTC6
FOXA1
FAM153B
NTF3
PLD1
PFDN1
C6orf226
TBCB
POLR2I
OVOL3
ARL8B
MCM7
AP4M1
STOML2
PIGO
SSTR5
IL16
EIF3D
GUCA2B
CCDC43
CASTOR1
SSBP1