ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457145 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◣ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

ALDH18A1
PDXK
SLC39A10
WDTC1
DDX17
EPC2
HNRNPA2B1
CBX3
EIF4G2
GABARAP
PHF23
DVL2
ELP5
CTDNEP1
STRBP
SEPTIN7
SLC25A25
NAIF1
WASF2
NUDT3
KCNK4
GPR137
BAD
DAGLA
RSF1
AAMDC
GSK3B
MSMO1
DUX4
RPS6KC1
ART1
RPGRIP1L
FTO
LY6L
DDX42
CCDC47
USP49
FANCA
ARID3B
SMARCD2
SRGAP2
FAM72A
SERPINI1
PDCD10
XPO7
DOK2
ATG16L2
SRSF1
FAM72C
SRGAP2B
FAM72D
UAP1L1
MAN1B1
PGLYRP4
RHOBTB2
MDM2
PMS1
ORMDL1
MTRNR2L1
PDZK1IP1
MOB1B
AURKAIP1
FRG2C
DICER1
RHCE
SRGAP2C
FAM72B
PTPRF
SERPIND1
WWOX
HDAC6
INMT
MINDY4
ASIC3
MAP3K1
FCGR1A
ADGRL1
OPN1MW3
OPN1MW2
OPN1MW
HNRNPF
TEX28
MEMO1
GTPBP6
BTNL9
GPR182
NEXN
MARCHF2
BACH2
DENR
UBE2H
CRYAA2
CRYAA
SLC6A9
AVEN
PRAME
EPB41
INTS10
RFX1
CENPC
STAP1
RELN
SLC4A1
INO80C
NXF3
PPP6R1
SSH1
PCNT
C21orf58
SEPTIN5
GP1BB
TMEM275
KNCN
PYCR2
SULT2A1
PTPRH
TANGO2
ARVCF
KANSL3
FER1L5
GYPB
WBP2
C1orf116
NOS3
ABCB10
PHRF1
TSHZ2
XRCC5
CSTF2
VIM
E2F6
CAPRIN2
DRC7
ABO
NFE2
MACC1
PPP1R15A
SLC45A3
CFAP36
SLC7A8
SEPTIN9
SNAP29
PI4KA
MAN2A2
NFU1
SPTAN1
ZNF77
RAB33A
TMEM87B
CASS4
ZNF497
A1BG
PRKAB1
TSPAN32
C11orf21
WNK1
ZNF451
AVPR2
VWA7
DHRS3
ZNF852
CDK12
MED1
KMT2E
RHD
P2RX6
TCP11L2
PHF19
POLR2J3
SYT7
THAP6
DCLRE1B
AP4B1
NUP214
PSMD5
BIRC2
H4C4
H3C4
H2BC6
ALAS2
TRUB2
COQ4
ARID1A
TJP3
ZNF347
CSPP1
COPS5
USP17L22
USP17L21
USP17L20
USP17L12
PXN
RTN4
DNMT3B
COMMD7
DNAJB2
CLUL1
YJU2
UBE2L3
RIMBP3C
RIMBP3B
TMEM59
ZNF609
RSRP1
TRIM37
SYF2
CCDC22
LEPROT
LEPR
TRMT10A
MTTP
HDHD3
FXYD3
CXXC5
AIFM1
ZNF117
ERV3-1-ZNF117
ERV3-1
TUBA1C
KIAA1586
FKBP8
SIRT1
RIPOR3
RNF168
SMCO1
SUPT7L
SLC4A1AP
RPS11
RPL13A
EZH1
RAMP2
RNF223
CMIP
BCL3
RNASEH2C
KAT5
WDR89
CEP43
NCAPD2
MRPL51
PRDX1
KRT10
GP9
BCL7B
HSF5
RNF217
SLC43A3
NXT2
PAXBP1
SLC2A1
FRG2
NR4A3
UROD
HECTD3
ZBTB7B
LENEP
ERMN
TMEM248
CSF1
HAGH
FAHD1
CASC3
ERCC6L2
FUT10
BRD7
LAMB1
PPIL2
CYP3A43
TM7SF3
MED21
NOP16
HIGD2A
RBM8A
ADAMTSL4
CRB1
DIP2A
ZMYND8
RBBP5
ANKFY1
ZNF165
OR1F12
VILL
UFD1
CDC45
SVBP
ERMAP
LOC102724770
DGCR6
TMEM72
TMEM94
FOXJ1
KDSR
CRKL
EML2
NLGN3
TTC26
PRPF38A
ORC1
CTBS
GUCA1B
NME1-NME2
NME1
ADARB1
CCR9
IL36A
THAP7
TUBGCP5
LYL1
SRCIN1
RHOC
PRDM8
CCDC88B
SCN9A
RAB33B
COQ10B
GTF3C2
ZNF335
C6orf89
CENPF
SPATC1L
UBE2F
IL1R1
ZNF408
ARHGAP1
GNB2
LZTR1
COLGALT2
MARK3
RASA4
KCNN4
SLFN14
PDE4C
BTBD10
PLEKHA4
REXO4
ADAMTS13
NUF2
OBSL1
INHA
CR1L
NARF
CCDC116
SDF2L1
FBXW11
NECTIN4
STAT6
KCNH2
GNA12
FABP6
TNPO3
FKBPL
ATF6B
ARF3
ARID2
LAG3
COL18A1
PTMS
C10orf71
RINL
MLX
HSD17B1
COASY
TRIM63
TPGS1
KRBA1
SUPV3L1
RPS26
ZNF391
YIF1B
KCNK6
USP21
PPOX
CDC42EP1
ZSCAN31
TBL2
BNIP3L
ATAD2
KDM3A
ITLN2
GBA
PCIF1
ST3GAL4
NPR1
ILF2
TBL1X
BTG2
GYPE
DMAP1
SPAAR
HRCT1
FLVCR1
KIF2C
MRPL40
HIRA
ASIC4
IL1RL1
TOP3B
PLSCR1
TRIM69
TENT5C
CLP1
YPEL4
ASXL1
ST6GAL1
SCN1B
HPN
FAM83A
BTNL10
WDR46
RGL2
PFDN6
TSC1
GFI1B
SAMD4A
SELPLG
AP1G1
SPTBN4
BLVRB
NQO2
C6orf47
BAG6
APOM
GOLGA8B
WASHC2C
OAZ1
JSRP1
TOR4A
NDUFS3
KBTBD4
FAM180B
MBD2
OR10V1
MED15
PUS7L
IRAK4
RPL12
LRSAM1
EAPP
NSD2
IQUB
SIRT4
SLC26A8
MAPK14
OSBPL5
ZZZ3
UROS
BCCIP
STK11
TUBE1
FAM229B
BHLHA15
RRP15
ATP8B2
AQP10
NR1H3
ACP2
AJUBA
C3orf86
SLC35B2
HSP90AB1
EPS15
GPX1
STOML3
USP4
SMG7
TAF12
LIMS1
OAZ2
CA1
TFPT
PRPF31
ITGB3BP
EFCAB7
CCNI
ZSCAN30
SF3A3
PAFAH2
FHL3
SLC25A37
SH3BGRL3
MRPL48
NUP210L
TSSK2
DGCR2
NDUFS7
FOXN1
NCAPG
ZNF273
STARD9
THEMIS2
LAPTM4B
CCNG2
ATAD3A
SLC35E2A
RSAD2
LUC7L2
NBPF1
GRIN1
ZCCHC24
RASA4B
EGFL7
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ASCC1
ANAPC16
SLC10A5
IMPA1
TRIM3
TIMM10B
ARFIP2
CLTCL1
RPS19
TMCO6
NDUFA2
IK
EHD1
TCTEX1D4
PLK3
BTBD19
KLHL20
CDC5L
CPOX
DRD4
AQP1
SZT2
MED8
SEC22B
PTCD3
POLR1A
PTK2B
FRMD4A
C1orf226
RPA2
SLC25A42
MICOS10-NBL1
MICOS10
TRIM35
SPATA46
UTP3
MFSD12
DIPK1A
ZFPM2
RTBDN
MAST1
SLC6A19
ST7
KSR1
HTR4
CALM2
TRIM6-TRIM34
TRIM6
S100A13
S100A1
CHTOP
ATP6V0A2
GOLGA3
PPM1F
ZNF683
EMID1
ARFGEF2
GABPB2
UCP3
SIGLEC12
SSBP1
MGAT5
RAB32
WDR70
NUP155
ZNF669
LRRC37A3
TPP1
TAF10
H4C8
COPB2
RRP8
ILK
C1orf159
ECM1
TMEM120A
CTSD
NFKBIL1
DDX39B
ATP6V1G2
CCNC
PSPN
ALKBH7
AP1M1
CIBAR2
KRR1
DNAJB12
ALG14
RPEL1
PMVK
CCDC200
RBL1
RPS8
SLC27A5
ZBTB45
TRAPPC9
THAP9
SEC31A
NUPR2
CHCHD2
LARS2
CHSY1
GET4
PISD
CSDE1
PPM1D
TMEM43
CHCHD4
TBC1D25
MRPL45
SART1
SNAI3
PRDM11
NPL
CUL5
RGS19
OPRL1
LKAAEAR1
SPDYE14
SPDYE10P
SCAMP3
FAM189B
S100Z
UBE3B
RNF10
TNFRSF1A
GAGE2C
GAGE2B
GAGE2A
GAGE1
SNRPE
MYL12A
WDR74
STX5
NBEAL2
CCDC12
IGF2BP3
RAP1GAP
SLC25A11
RNF167
PFN1
GP1BA
CACTIN
TMEM18
ATXN7L2
CYB561D1
GLIPR1L1
CAPS2
BSDC1
FBLN2
SS18
MRPS28
H4C5
H2BC7
H2AC7
KCNAB2
MYBPHL
OR10AC1
HERC1
NDE1
MARF1
CCDC59
UBE2I
ST3GAL2
CCRL2
SPIDR
BSG
LENG9
CDC42EP5
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
TXN2
TRIP4
PCLAF
PIH1D2
NKAPD1
C8orf37
NUP42
TAS1R1
NOL9
ADAMTS14
CPT1A
HMX3
TMOD1
ATP6V1FNB
ATP6V1F
TMEM107
BCAS2
IQCB1
EAF2
PDCD6IP
H4C3
H1-6
ORAI2
LIPC
NRL
DCAF11
KDM5C
GAS2L1
C19orf81
ECE1
PRR19
PAFAH1B3
MSANTD1
CEP85L
ZC3HAV1
UBE2B
CDKL3
JMJD1C
TMEM242
OR2C1
MFAP3L
SS18L2
SEC22C
PUF60
FSTL3
PTEN
KLLN
CLCN3
ZNF474
TCTEX1D1
NCOA4
ZNF444
PRODH2
MRPL27
EME1
TOM1L2
DRC3
H2AX
KRT8
HMBS
PTGDR2
ZP1
FCMR
CDKN1A
CORO1C
ZNF555
ANKRD61
ACSF3
CYB561
NPPA
RBM26
THEG
NTRK1
INSRR
ARMC8
TXNDC2
SCARF2
TNFRSF1B
MRPS7
MIF4GD
GGA3
MAD1L1
NUDT1
MRM2
QRICH1
PTMA
RAP1A
UBOX5
FASTKD5
KMT5A
HYLS1
PPP4R3A
TSGA10IP
ZDHHC6
VTI1A
SMIM41
ATG101
PIK3R3
RNFT1
MDM4
PPIH
NR1D1
HEMGN
GATA1
RBPJ
KLF10
SPRR2A
TRIB1
SPRED2
EPHA2
CSTF2T
PRRG2
H1-0
GCAT
TARS1
NOSIP
RNF144A
PITHD1
TREM1
FAM210B
RCCD1
KLF9
TMEM167B
CORO2A
DGCR8
TRAPPC4
RPS25
LMLN2
KCTD14
CEBPE
YTHDC1
TTI2
GNG14
DHPS
AP5Z1
SPNS1
LAT
TAOK1
PDE7A
ARAP3
RAB42
COX7A2L
SUPT5H
RPS16
ARL14EP
ARNT
CFAP298-TCP10L
CFAP298
DDIT4
TUBB
MDC1
STAG3
MAP11
GPC2
GAL3ST4
HDAC8
CRCP
POLR3F
DZANK1
DMAC2
ERICH4
PSME3
BECN1
ZC3HC1
IREB2
RPUSD2
CCDC32
PSMC5
FTSJ3
TTC21B
ALDH2
RABEP2
CD19
BMX
SHISA4
MRPL39
BPHL
CCDC97
GPATCH3
UBAC1
CLK3
HAPLN2
SDE2
GP6
DYNC2I2
HTR1F
CDCP1
RINT1
PUS7
BAK1
WNK4
VPS25
ZNF57
PPP1R13L
POLR1G
MUC3A
ZMPSTE24
TMCO2
RPS7
WDR55
DND1
RPP25
SKIV2L
POLM
NELFE
AIP
SFSWAP
ATG9B
ABCB8
VARS2
GTF2H4
CACYBP
SRCAP
LOC730183
MAP3K8
H3C13
H2BC18
CD33
RHEBL1
KMT2D
RHAG
TUBB1
TMEM244
PACSIN2
ITFG2
GOLGA7B
PXT1
KCTD20
RPL5
WDR83OS
WDR83
MAN2B1
MST1
THG1L
PDCD2L
IFNAR1
FZD1
TPR
ODR4
RAB11FIP1
TIPIN
ZNF74
PARP16
GYPA
SLC27A4
NCDN
KIAA0319L
PXMP4
TMEM52
CALML6
FZR1
OSBPL7
MRPL10
LRRC46
SCRN2
COL1A1
SUSD1
PFDN4
HNRNPH1
PRR5
JOSD2
ASPDH
ELF3
TNFAIP8
PPP4R3B
AHCTF1
SH3BGR
LCA5L
DPEP3
DPEP2
RHBDD1
TET3
TMEM69
GPBP1L1
RPL10A
C12orf76
SYCP2L
GCM2
WASHC2A
THRAP3
STAT3
HDAC11
ZMIZ1
NEK2
ERVH48-1
OR52A1
ATP8A1
HNRNPH2
SMG5
LMOD1
FDXACB1
C11orf1
ALG9
TMEM79
TSPAN1
P3R3URF-PIK3R3
P3R3URF
USP54
TIMM17A
NRCAM
LDB1
LY6G5C
MRPL35
IMMT
STRIP1
CBFA2T3
MYO1C
MORF4L2
SPA17
SIAE
BHLHE40
ANXA2
PRMT3
C6orf226
SRSF7