ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5930121 | Acute myeloid leukemia
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◣ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX20532176: hESC H1

◢ SRX20532177: hESC H1

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

WASHC2C
HEXA
WASHC2A
AP5Z1
LAMP1
PRR5L
COMMD9
DUX4
GET4
SYT15
DMPK
DMWD
ASAP1
HIP1
SPDYE9
SPDYE8
SPDYE15
SPDYE13
SPDYE11
FIGNL2
LMO2
NCF1
CYTH3
RNASEH2C
KAT5
RAD9A
PPP1CA
STX1A
MMP9
ITGB2
EXT1
UBE2Q1
CHRNB2
ATP6V0D1
AGRP
DGKZ
ARHGEF12
EZH1
RAMP2
SUN1
KLF2
PDXK
CYB561
PRAM1
NLRP12
CD82
CCL4L2
RNF149
MTHFR
CLCN6
ZNF358
MCOLN1
LUZP1
CLCN7
METTL9
ARHGAP31
TPM4
BPI
BAX
PHACTR3
SLC37A3
ZNF595
TMEM104
NAT9
CD300A
RAPGEF1
KIAA0513
AOAH
HNRNPF
EGFLAM
MAMDC2
NFX1
LMBR1
TEAD3
RALGDS
RPS6KA1
STAB1
MXRA7
METTL23
NCR3
LTB
LST1
IKZF3
ARID3B
MTRNR2L8
MYEOV
MTRNR2L1
MTRNR2L2
MSH3
DHFR
GABARAP
ERBB2
PNMT
PHF23
DVL2
MIEN1
ALDH18A1
GRB7
HNRNPA2B1
CBX3
SLC39A10
ELP5
CTDNEP1
EPC2
WDTC1
SLC45A4
DDX17
EIF4G2
NUDT3
STRBP
BHLHE40
SLC25A25
NAIF1
TES
SEPTIN7
TMEM199
SEBOX
POLDIP2
KIF5C
ART1
WASF2
TCAP
MRPL45
KCNK4
GPR137
BAD
TSPAN31
HAGH
FAHD1
ERAL1
SPATA25
NEURL2
CTSA
ERCC1
FRG2C
SSH3
POLR2J3
IRS2
MARCHF9
CDK4
ID1
SFSWAP
SERPIND1
GSK3B
ZSWIM1
PGAP3
UVRAG
DHRS3
NAGPA
TET3
RSF1
AAMDC
SPATC1L
CD300LF
SPNS1
LAT
MSMO1
LTBP2
CRBN
RPGRIP1L
FTO
RGPD2
RGPD1
UBE3B
DAGLA
TRMO
GRHL2
RBBP8NL
RBM48
PEX1
MTBP
MRPL13
SEPTIN9
TXNRD1
BCL3
ASB2
PSMD3
SUPT7L
SLC4A1AP
MED11
MDM2
PTPRF
RPS6KC1
SKIL
SUMF1
EFNA3
RAE1
MTRNR2L3
WBP2
ATF3
SLC35B1
FRG2
LY6L
SYNGAP1
PHF1
CUTA
NECTIN4
ZBTB7B
LENEP
IL1R1
ZZZ3
SPIDR
HES1
SMARCD2
USP49
TOMM22
SCHIP1
C1orf174
DDX42
CCDC47
SRSF1
RPUSD4
FAM118B
C8orf33
GBA
ILF3
RIOK2
TNS3
STARD3
PPP1R1B
MEOX1
TRIB1
SPTAN1
ISY1-RAB43
ISY1
POLR3F
DZANK1
LOC102724770
DGCR6
SERPINI1
PDCD10
RBBP5
HOOK2
SOCS2
RAPGEF3
RXRA
ABCC10
ELF3
CDKN1A
UAP1L1
MAN1B1
GPRC5A
UBE2H
TOX2
STX16
LZTR1
STAT6
TSR3
GNPTG
ATP6V1G1
MACC1
THAP7
ANGPTL4
POLR2J2
VPS50
HEPACAM2
UNC13D
TRIOBP
CD55
LIMA1
NOL4L
ATG16L2
GADD45A
RHOBTB2
VPS33A
DYNLRB1
RARB
APOBEC3B
POLR2J
ESRP2
UNKL
FAM72C
FOXJ1
IRF2BP2
PIP4P1
OSGEP
AVEN
APEX1
SRGAP2B
FAM72D
SQSTM1
ZNF335
SLC35A5
ATG3
ATAD2
YJU2
TRIM29
TBL1X
TMC7
TRMT2A
RANBP1
MUC3A
FLOT2
DHRS13
CCDC59
EN2
PGLYRP4
SKIDA1
FANCA
NOXO1
INO80C
PSMB7
GET3
ZBTB7C
CLPTM1
APOC2
PCIF1
AURKAIP1
SUPV3L1
SUPT6H
SMYD1
SDF2
MYCL
CYP27C1
GSR
MOCS3
DPM1
SNRPE
PPCDC
PHRF1
TFPT
PRPF31
DMAC2
ANXA2
CARD16
RIPOR3
IDH3B
RPS26
SLC25A11
RNF167
PFN1
LAMA3
PISD
TRA2B
DAZAP1
PDGFB
RDH5
ITGA7
BLOC1S1
SPINK1
SMN2
SMN1
FCGR1A
LGALS8
REN
ERICH4
IRF2BPL
NUP214
PURB
MRTO4
EMC1
SRGAP2
FAM72A
TBRG4
PLAGL1
WASHC5
NSMCE2
SPIRE2
LYPD6B
ARID3A
VIRMA
BCKDK
FXYD3
CYP2A13
ZNF408
ARHGAP1
ELFN2
C5orf51
SALL4
RGS3
XPO7
DOK2
UPP1
KMT2E
TBC1D30
CLN3
APOBR
TRAF4
HPS5
GTF2H1
BRF1
SRI
PDZK1IP1
TPP1
TAF10
PDAP1
BUD31
SLC25A53
FAM199X
TBL2
TSFM
TOP3A
SMCR8
SENP1
PFKM
TMEM205
RAB3D
CCDC159
YAP1
ZNF789
ATP5MF-PTCD1
ATP5MF
CDKAL1
PRICKLE1
MIER1
DNAI4
MRPS7
MIF4GD
GLTP
GGA3
OSER1
SLC25A45
FRMD8
RMND5B
ENTPD4
MFSD1
PPP6R1
KLF9
ITGB5
ZNF165
SAP30BP
RECQL5
OR1F12
CASC3
RDX
PTK2
NME1-NME2
NME1
DOK7
UXS1
SLC4A2
CDK5
C8orf74
GFM1
SLC27A5
SLIRP
ALKBH1
PAXBP1
TRMT1
NACC1
INMT
ASIC3
SHLD2
GLUD1
CELA3B
C16orf91
ZSCAN22
CORO7-PAM16
CORO7
RARG
EAPP
GTPBP6
TXN2
MMP13
U2SURP
GPR182
CEP162
ZNF585B
ZNF383
IER3
FLOT1
WSB2
HUS1
UBE3C
SRP9
ZDHHC6
VTI1A
SUSD4
ATP6V0C
AMDHD2
ST7
EIF2D
CDK12
PRKAG2
MINDY4
FZR1
PTBP1
OPN1MW
OPN1MW3
OPN1MW2
ARHGAP32
TJP2
TAS1R1
NOL9
MB
WWOX
KAT8
NGB
GP1BA
AXL
ZSCAN25
GNS
CCDC88B
TRIP4
PCLAF
MYLK2
BCL2L13
DENND2B
BIRC2
PMS1
ORMDL1
TMCO6
NDUFA2
IK
MTRNR2L9
KALRN
ZBTB45
SMG7
STAU2
GATB
ANXA10
FGGY
KRT1
MLLT10
MEF2C
HERC3
DIP2A
SPAG16
ITFG2
MEMO1
SSUH2
TM2D2
MRPS15
MED1
ADAM9
FAM83A
PMF1-BGLAP
PMF1
KRR1
FRMPD1
ANKS6
SUMO3
UBE2B
CDKL3
KIF25
RHEBL1
PNP
OSBPL2
JUNB
ERAP1
TRIM16L
RTF2
DOHH
CLSTN1
DOK3
DDX41
FNTA
DNAJC11
PXN
JMJD7-PLA2G4B
JMJD7
RBPJ
NUP107
ZNF668
ZNF646
VAC14
CRYAA
CRYAA2
SEPTIN5
GP1BB
INTS10
TMEM40
TJAP1
SH3GL1
DICER1
DERL3
CHAF1A
TEX28
SLC35F6
PSME3
BECN1
OAZ1
KLF6
SLC16A5
KCNMA1
KLF10
E2F6
ZMYND8
EPHB3
NDUFA4
SPRED2
PHAX
ALDH7A1
ZNF576
IRGQ
GRAMD2B
CCNT1
ARID2
ATG9B
ABCB8
RPS5
LANCL2
KRT31
SPHK2
ECH1
FSCN1
LRRC47
ACVR1B
UBAP2L
C1orf43
A1BG
SEMA3B
LSMEM2
SSBP1
ADGRB3
PTPRR
TIPARP
RNF223
MOB1B
CCDC97
PSMA1
THOP1
SGTA
COL23A1
TGFB2
GAMT
CALML5
ARID5B
RAD51AP1
C12orf4
TNNC2
RRP15
RGS20
PLEC
UBE2I
HNRNPH2
RHCE
TNC
PMEPA1
KANSL3
FER1L5
SLK
CSRNP1
SRGAP2C
HR
FAM72B
GSC2
PTPN6
C12orf57
TMEM262
UBAP1
SUMO2
NGDN
BANP
ALG6
THEMIS2
PARD6B
HM13
SULT2A1
ZNF497
FASN
SCAMP5
BSG
ADAMTS14
PPWD1
CENPK
UBQLN1
KDM7A
WDR62
THAP8
OTUD7A
SSH1
OSBPL7
MRPL10
LRRC46
LRFN4
PLA2G4B
BUB1B
ETV4
THRAP3
VGLL4
USP30
XRCC5
RELN
VASH2
MRFAP1L1
BLOC1S4
SLC33A1
CMIP
ALLC
BIRC3
ADAM23
SCRN2
NAPB
PYURF
PIGY
EPS8
C19orf33
NEK6
ADARB1
GRAMD1C
PDCD6IP
METTL1
EEF1AKMT3
CYP27B1
RPTOR
RABGAP1L
KYAT1
STX6
COMMD3-BMI1
COMMD3
BMI1
GPATCH3
SMARCA4
TMEM63A
SF3A3
TACC1
SRCIN1
H2BW2
BAIAP2
HMOX1
RFX1
RAB3IP
ATG14
SLCO4A1
LARP1
ZNF514
ZNF2
TMCC3
FLYWCH1
TMEM248
TSN
PSMD1
LNX1
TMEM116
ERP29
ADGRL1
VPS11
CRTC1
TCF24
ITGB3BP
EFCAB7
CACTIN
ZNF865
ZNF524
IGLL5
FIZ1
NUGGC
ELP3
TGIF1
ARHGEF7
RNPEPL1
EIF5A2
DUSP28
ANKMY1
TMEM208
LRRC29
SLC6A9
DPH2
B4GALT2
ATP6V0B
DENR
PPP5D1
CALM3
SNX21
MYL12A
BNIP3L
GPN2
C5orf63
TBC1D2
PPP1R11
ATP6V1H
HOXC13
TANGO2
ARVCF
PRMT3
FOXO6
SEMA5B
FBXO46
PLD1
SYBU
CPA1
RINL
STMN3
RTEL1
HOXA3
HEYL
REEP4
NKD2
DUSP6
NUDCD3
PHTF2
MAP3K7
MRPS11
MRPL46
KRT86
NFE2
BCAS1
KSR1
PEAK1
HMG20A
GRAMD1A
ECHDC1
SBK1
FAIM
DNPEP
NSD1
RPLP0
GCN1
NIBAN2
ZCCHC4
RPL18
FAM83E
ATP13A3
PMEL
STRA6
GSN
KDM3A
QRICH1
SYNGR3
GFER
PLEKHG3
TRUB2
DBNDD2
COQ4
TCAF2
RPL23A
RAB34
PROCA1
MAFK
C1orf116
BTBD6
NPEPPS
RPS11
NDST1
OR9A4
OAZ3
MRPL9
SCYL3
RMND1
ARMT1
NCBP2AS2
NCBP2
ENO3
PSMD5
PPP1R15A
EIF3F
TNPO3
DGAT2
TEX46
KDM1A
AP2A2
PHF19
PLEKHH2
EPB41L1
PTP4A3
ATN1
PRKRIP1
TFDP1
FEM1A
DDX23
VWA7
RHOD
NOL8
CENPP
LPCAT3
HNF4A
RGS14
LMAN2
GRHL1
ARMCX5-GPRASP2
PUS10
PEX13
NDUFAB1
TMEM18
PPL
LYPLA1
EIF1AD
CST6
BANF1
PTPRH
POLD4
NOP16
HIGD2A
MTUS1
LFNG
ITPK1
GOLGA7B
TMEM242
DNAJC30
BUD23
DDX46
PRRT2
MAZ
PRSS22
HSPB1
DPP3
CYP24A1
HDAC6
CBX7
NSD2
SAP30
BAHCC1
COL1A1
ATP6V1C1
ZHX2
STYXL1
RASEF
CA5A
ATP6V1E1
PRKCA
PHF21A
BMS1
NEXN
LSG1
ITM2C
LDHD
UBE2L3
UBE2E2
PDE6D
COPS7B
CAPRIN2
C6orf47
BAG6
APOM
SFXN1
UQCRHL
RBM28
RRAGC
UPK3B
KDM4C
RARA
KDELR1
GRIN2D
NDUFS7
AP5S1
TMEM91
NR5A2
NAPA
SNAP29
SMG8
PI4KA
NVL
SEC13
LOC388282
METTL2A
EFHD2
PRAME
SH2B1
RPL13A
LUC7L2
CXXC5
TMEM59
AFF4
SYNCRIP
LURAP1L
KRT80
TIMM22
TCERG1
LTO1
ZNF608
TSC1
SERP1
GFI1B
EIF2A
COX16
CD109
STON2
MKLN1
NFKBIA
NUF2
BNIP1
ARID1A
DUSP2
ASTL
PPP1R37
MRPL1
PYCR2
AFAP1
TTC32
TPRN
TMEM203
RAB33A
NDOR1
CHD7
PDE3B
GTF3C5
ZNF507
NXF3
SMIM41
BRPF1
TUFT1
CYP4X1
TMCC2
HOXA4
ATG101
PLEKHF2
MINDY2
FBXL3
ST6GALNAC1
PRR3
GNL1
LCA5
INTS1
SART3
ISCU
ZGPAT
C17orf58
ARFRP1
AGTPBP1