ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457146 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◣ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

PDXK
ALDH18A1
WDTC1
SLC39A10
DDX17
STRBP
EIF4G2
SLC25A25
NAIF1
EPC2
HNRNPA2B1
CBX3
WASF2
SEPTIN7
GABARAP
PHF23
DVL2
ELP5
CTDNEP1
NUDT3
GSK3B
KCNK4
GPR137
BAD
RSF1
AAMDC
RPGRIP1L
FTO
ARID3B
MSMO1
USP49
RPS6KC1
LY6L
DDX42
CCDC47
SRSF1
UAP1L1
MAN1B1
SERPINI1
PDCD10
FCGR1A
RHOBTB2
MDM2
DAGLA
FAM72C
SRGAP2B
FAM72D
PGLYRP4
SMARCD2
SERPIND1
DUX4
GPR182
PDZK1IP1
SEPTIN5
GP1BB
FANCA
SRGAP2
FAM72A
ATG16L2
XPO7
DOK2
SULT2A1
ART1
WBP2
PMS1
ORMDL1
PTPRF
MEMO1
OPN1MW3
OPN1MW2
OPN1MW
AVEN
INMT
MINDY4
TEX28
MTRNR2L1
ASIC3
MOB1B
RHCE
AURKAIP1
SRGAP2C
FAM72B
WWOX
RELN
INO80C
HNRNPF
MAN2A2
WNK1
NFU1
SNAP29
PI4KA
PPP6R1
CAPRIN2
DRC7
FXYD3
UBE2H
PHF19
INTS10
TMEM59
PRAME
NXF3
ZNF117
ERV3-1-ZNF117
ERV3-1
PPP1R15A
PLEKHA4
SPTAN1
TRIM67
SLC6A9
LAMB1
TMEM72
TSHZ2
MACC1
DICER1
BACH2
DENR
C1orf116
RNF168
SMCO1
E2F6
RTN4
ADARB1
IL36A
DHRS3
RAB33A
AIFM1
YJU2
ADGRL1
PRKAB1
CDK12
MED1
ERMN
MGAT5
OR2C1
RNF10
CSTF2
EPB41
AVPR2
PXN
RBM8A
KANSL3
FER1L5
RHD
PTPRH
RFX1
TBL1X
CFAP36
ZNF852
PSMD5
KIAA1586
CMIP
TJP3
MARCHF2
RNF144A
TRUB2
COQ4
RHOC
SLC45A3
CLUL1
PI16
HDAC6
GRIN1
OAZ2
SLC4A1
ZNF77
BTNL9
CEP43
TRIM37
CLTRN
ARMC8
CTBS
LIMS1
TTC26
ZNF347
NCAPD2
MRPL51
NFE2
ZNF451
RNF223
NEXN
PCIF1
SYT7
KMT2E
BCL3
VIM
XRCC5
CRYAA2
CRYAA
FRG2C
KDSR
ZBTB7B
LENEP
ABCB10
SSH1
DCLRE1B
AP4B1
TRIM63
HDHD3
TMEM248
NR4A1
ST3GAL4
MAP3K1
OR10V1
UBE2F
NXT2
SCN9A
TNPO3
PAXBP1
SPINK4
THEMIS2
GYPE
EMILIN2
MFSD12
TMEM120A
KRT10
SRCIN1
VWA7
IL1R1
CENPF
GLIPR1L1
CAPS2
GTF3C2
BIRC2
CASS4
PHRF1
STK11
KDM3A
HSF5
ZNF497
A1BG
LAPTM4B
SEPTIN9
TBL2
ITLN2
OAZ1
VILL
JSRP1
PLSCR1
TANGO2
ARVCF
SNAI3
PRDM11
LZTR1
ARID1A
ATAD2
CXXC5
ALAS2
CCDC88B
RAB32
RSRP1
SYF2
BTNL10
ANKRD33
CASC3
EML2
GBA
PTEN
KLLN
KLF2
ZNF408
ARHGAP1
LEPROT
LEPR
GTPBP6
ADAMTSL4
ZNF609
TCP11L2
PTCD3
POLR1A
TNFAIP8
TSPAN32
C11orf21
NUPR2
CHCHD2
COLGALT2
TMEM275
KNCN
TMEM18
FKBP8
RASA4
PPM1F
P2RX6
SLC43A3
MFAP3L
CPOX
NUP214
PDK1
GYPB
SCN1B
HPN
DNMT3B
COMMD7
NR4A3
THAP6
OR10AC1
CD300LF
GDPD5
APBA2
RPS11
RPL13A
GUCA1B
TPM4
H4C4
H3C4
H2BC6
TXNDC2
VSIG10L
ETFB
BTG2
TYMP
ODF3B
KLHDC7B
PYCR2
CRKL
MAD1L1
NUDT1
MRM2
LMLN2
CEBPE
ZNF165
OR1F12
TM7SF3
MED21
TSC1
GFI1B
WDR89
ANKRD61
EIF2AK1
ZFPM2
H4C8
CSF1
NARF
ABO
TREM1
TEN1
ACOX1
GNB2
MBD2
MIER1
DNAI4
NDUFS7
DNAJB2
SLC26A8
MAPK14
TNFAIP3
NPR1
ILF2
SLFN14
UBAC1
PSIP1
DIP2A
DNAJB12
PPIL2
FBXW11
TMOD1
C6orf47
BAG6
APOM
PRDX1
FUT10
TUBA1C
PPP1R14D
RNF217
GOLGA8B
ARID2
ALOX12
USP11
PRDM8
KCNN4
AP1G1
HMOX1
GOLGA7B
NRCAM
CLK3
H1-0
GCAT
SIRT1
PLSCR2
C3orf86
METTL1
EEF1AKMT3
CYP27B1
TUBGCP5
FOXN1
SLC7A8
KLHL20
KRT8
HAGH
FAHD1
SAMD4A
VARS2
GTF2H4
BCL6
KRBA1
ASCC1
ANAPC16
COL18A1
ZNF669
CHSY1
SDE2
SLC35E2A
FAM83A
PIK3R3
RINL
PDE4C
ZDHHC6
VTI1A
SF3A3
FHL3
CXCL6
C6orf89
NOS3
UFD1
CDC45
PXT1
KCTD20
HDAC11
RTBDN
MAST1
RBPJ
CCNI
ST6GAL1
MFSD2B
NOP16
HIGD2A
BCL7B
PRPF38A
ORC1
THAP7
UROD
HECTD3
POLR2J3
YIF1B
KCNK6
SUPV3L1
EIF4A2
ORAI2
CCP110
TMEM191C
FKBPL
ATF6B
HTR4
UCP3
SPIDR
EHD1
FZD1
WASHC2C
SNRPE
BRWD1
MSANTD1
CCRL2
NECTIN4
TENT5C
KIF3B
NPHS1
KIRREL2
UBE3B
CORO1C
NBEAL2
CCDC12
ATP2C1
BSG
ERCC6L2
RASA4B
SS18L2
SEC22C
BNIP3L
ZC3HAV1L
RNF224
SLC34A3
TUBB4B
TPP1
TAF10
TRIM3
TIMM10B
ARFIP2
SVBP
ERMAP
RRP8
ILK
CRYBG1
DYNC2I1
ESYT2
CD164
ANKFY1
CNKSR3
IRF2BP2
CLPTM1
APOC2
USP21
PPOX
CASTOR2
ST6GALNAC1
LYL1
ADAMTS14
BRPF1
NDUFS3
KBTBD4
FAM180B
ASIC4
SOCS2
NSD2
MYCL
HSPA1L
HSPA1A
LSM2
TRIT1
FABP6
ZNF510
TNFRSF1A
FAM110A
RAB33B
ID2
CSE1L
CACTIN
COL1A1
IL1RL1
TOM1L2
DRC3
ASF1B
TRAPPC9
SPDYE14
SPDYE10P
TUBE1
FAM229B
IL13
BAIAP2
TAF12
TMEM107
UBE2L3
PIH1D2
NKAPD1
C5AR1
ISOC2
ZNF628
SPATA24
PROB1
SLC25A11
RNF167
PFN1
GP1BA
ENO3
ALG14
ACSL5
RIPOR3
THAP9
SEC31A
ZNF74
QRICH1
ARSD
CSTF2T
GP6
CCM2
WWP1
PRKCI
PITHD1
PAF1
REXO4
ADAMTS13
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
RBBP5
UBE2B
CDKL3
SH2B1
VPS52
RPS18
B3GALT4
UBC
HEMGN
GPR42
HEPH
TXN2
SLC2A1
DDIT4
TFR2
TTC12
JMJD1C
SRA1
SLC35A4
APBB3
GUK1
GJC2
MARK3
RTN3
ATL3
RSAD2
CCDC97
CDC42EP1
RPA2
VPS13B
PSPN
ALKBH7
FOXJ1
TMEM69
GPBP1L1
WEE1
ITGB3BP
EFCAB7
RPP25
GSDME
KLHL18
KIF9
RPUSD2
CCDC32
PCNT
C21orf58
TMEM94
ATP6V0A2
NOL8
CENPP
INKA2
DUS3L
DDX20
WDR83OS
WDR83
MAN2B1
RCC1
NRTN
OBSL1
INHA
RNFT1
GABPB2
C10orf71
ADAR
LY6G5C
BOD1L2
POLM
C11orf96
SQSTM1
LPCAT3
UTP18
MBTD1
RGS20
STBD1
SLC25A17
MAP1LC3B2
HEXIM2
DDC
ATF7-NPFF
ATF7
CSPP1
COPS5
EGFL7
DCTN2
ZMIZ1
PAK1IP1
C6orf52
MARCHF7
KRTAP10-7
KRTAP10-6
DHTKD1
DGCR8
TBC1D25
ZNF564
EZH1
MST1
FAM53C
CDC25C
CCDC22
NPL
RAB42
PPP1R14C
CENPC
STAP1
RIMBP3C
RIMBP3B
CA1
ZNF273
USP3
CTPS1
H2AX
HMBS
POLA1
IREB2
EIF1AD
CST6
BANF1
STAM2
MEST
PRR5
MED15
TPGS1
LGALS4
LCA5
IFITM3
STAT6
HAPLN2
VAT1
RND2
TXNIP
PDE7A
PTPN12
RRN3
C1orf159
C5orf15
TIPRL
BTBD10
IQCH
AAGAB
RAP1GAP
GOLGA3
PPP1R15B
ATF3
MAGEA11
SEC22B
TCTEX1D4
PLK3
BTBD19
PRC1
RPS26
EAPP
ZMYND8
SLC33A1
CCDC200
COQ10B
RCSD1
PSMD10
ATG4A
TBX18
PARK7
TRIM69
NEU1
TCTEX1D1
TCFL5
STX1A
SPATC1L
NLGN3
BAZ1B
TXNDC11
ISY1-RAB43
ISY1
SMG7
KCNH2
CDC5L
PLAAT2
HOXB9
BHLHE40
FAM210B
KCNJ11
MTBP
MRPL13
AGPAT1
SUPT7L
SLC4A1AP
TRMT2A
RANBP1
C9orf16
TMPO
SIL1
ATXN7L2
CYB561D1
MRPL54
APBA3
ATP8B2
AQP10
SIGLEC12
C2orf50
ECH1
BAHCC1
H4C3
H1-6
TSC22D4
NYAP1
RHAG
PPP1R12A
PPARD
MRPL35
IMMT
NME1-NME2
NME1
GDAP1
PARP16
EXOSC9
PRRC2A
AIF1
FRG2
PISD
USP6NL
CRB1
ACSF3
ZNF467
CALM2
EPS15
ABCF1
MRRF
HERC1
TRIB1
PSME3
BECN1
UROS
BCCIP
VMAC
NDUFA11
TOP3B
TNXB
RGS14
LMAN2
TPR
ODR4
MYBPHL
ATAD3A
PCYT1A
DIPK1A
PPP1R12B
APOBEC1
POLD4
SLC25A42
RPL11
CCDC59
CYP3A43
GTF2B
CFAP20
ERVH48-1
CCNG2
ELF3
ULK4
MRPL40
HIRA
TRMT10A
MTTP
DAGLB
KSR1
ETFRF1
CFAP94
TRAPPC4
RPS25
SH3BGR
LCA5L
DPEP3
DPEP2
GAS8
DBNDD1
DUSP1
PRR29
ICAM2
NDUFAF1
QSOX2
TMCO6
NDUFA2
IK
HEXB
HCN2
CD14
C2orf88
LRRIQ3
FPGT-TNNI3K
FPGT
CD2
YARS1
S100PBP
S100Z
ZC3HC1
TMC8
TMC6
RHOT1
DOK3
DDX41
DSTYK
TMEM87B
PDCD6IP
ZCCHC14
MRPS16
DNAJC9
MTHFR
CLCN6
SMIM41
ATG101
FDXACB1
C11orf1
ALG9
RAMP2
ARF3
GP9
PTP4A2
BSDC1
PRR35
PIGQ
NHLRC4
TMEM114
ZNF576
IRGQ
MRPL27
EME1
HUS1B
RRP15
KLF3
WDR46
RGL2
PFDN6
RUNX1T1
YARS2
TMEM9
UTP3
RAPGEF5
JOSD2
ASPDH
E2F1
RBMX
TMCC2
PPP4R3B
PRPSAP1
TUBB
MDC1
MAD2L1BP
GTPBP2
C1orf226
TOR4A
SPATA46
IQUB
TMEM183A
CCR7
SLC7A2
EVA1B
MYL12A
MAPKAPK3
CISH
MRPL48
H2AZ2
HYLS1
HOMEZ
AP1M1
DHDH
SLC27A5
ZBTB45
TEX46
KDM1A
RCOR3
GNA12
ZNF474
CEP85L
NR1H3
ACP2
NUP210L
SSBP1
ATF4
TSSK2
DGCR2
NCOA4
PDAP1
BUD31
COMT
PAFAH2
SSBP2
MAMSTR
PPM1D
IL19
IFT172
GCKR
FNDC4
TXNRD2
IL10
ST7
CTR9
H4C12
H4C11
H2BC14
H2AC14
DHH
SCMH1
CLP1
NBPF1
SELPLG
TRIM6-TRIM34
TRIM6
YPEL4
ZNF813
TLE2
TAS1R1
NOL9
TNFRSF1B
TRIB3
ETFA
ZNF335
USP9X
TUBB1
HDC
VENTX
WDR74
STX5
GSE1
TEAD2
SLC17A3
DKKL1
LARS2
THEM4
CYP26A1
FAM240C
ISG20
CCDC116
TRMO
LRRC23
NDUFB3
FAM126B
SELENOH
AQP1