ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976677 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◣ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

IKZF3
MYEOV
ERBB2
MIEN1
GRB7
MTRNR2L8
SLC45A4
ID1
ARID3B
MTRNR2L2
MSH3
DHFR
ERAL1
PNMT
TCAP
SSH3
TMEM199
SEBOX
POLDIP2
IRS2
RBBP8NL
TES
GRHL2
TOX2
MTRNR2L1
SFSWAP
RAPGEF3
KIF5C
TET3
NAGPA
SLC35B1
C1orf174
TNS3
CD300LF
ANXA10
C8orf33
LTBP2
ISY1-RAB43
ISY1
MTBP
MRPL13
RBM48
PEX1
CRBN
NECTIN4
BHLHE40
MRPL45
REN
TOMM22
ASB2
DUX4
PSMD3
ZDHHC6
VTI1A
SPINK1
WBP2
SCHIP1
UNC13D
STARD3
PPP1R1B
PGAP3
ELFN2
TMC7
CDKN1A
STX16
TXNRD1
GSR
SUPT7L
SLC4A1AP
VPS50
HEPACAM2
SMN2
SMN1
IDH3B
RPTOR
SPIRE2
SERPIND1
RXRA
ANXA2
SQSTM1
OSER1
SKIL
KIF25
CARD16
GPATCH3
GPN2
BCL3
UBE3B
BUB1B
APOBEC3B
SALL4
PSMB7
CSF3R
CDKAL1
PLD1
EIF2D
GPRC5A
PLA2G2E
HES1
GLTP
ABCC10
POLR2J
ESRP2
GRAMD1C
FLOT2
DHRS13
POLR2J3
C8orf74
TTC17
LIMA1
SPIDR
LYPD6B
SLC16A5
RBBP5
IL1R1
SUPT6H
SDF2
ZBTB7C
C19orf33
ELF3
UXS1
TRIM16L
TRIB1
MBNL1
IER3
FLOT1
TRIOBP
RARB
NOL4L
CXCL5
RGPD2
RGPD1
CDH18
RIOK2
GATB
LAMP1
ZZZ3
MED11
POLR3F
DZANK1
TRIM29
DHRS3
TAS1R1
NOL9
BANP
H2BW2
CA5A
ZNF398
TSR3
GNPTG
CD55
EPHB3
SLC25A45
FRMD8
PMEPA1
KLF6
RAD51AP1
C12orf4
EIF5A2
EPB41L1
TRAF4
OSBPL2
ATF3
ANGPTL4
KMT5B
JMJD7-PLA2G4B
JMJD7
PLA2G4B
RNF213
PTPRR
UBE2H
SNRPE
WASHC5
NSMCE2
PLAGL1
GRAMD2B
NGDN
MRTO4
EMC1
SAP30BP
RECQL5
FOXJ1
SENP1
PFKM
ITGB5
ATG9B
ABCB8
THAP7
CYP2A13
NAPB
MTUS1
HAGH
FAHD1
SPAG16
SOCS2
YAP1
SPHK2
RPL18
FAM83E
RMND5B
CLPTM1
APOC2
NDUFAB1
GET3
MOCS3
DPM1
U2SURP
UBAP1
PISD
PRKAG2
LANCL2
TRMT2A
RANBP1
EIF3H
RGS3
DNAJC30
BUD23
SH3GL3
ST6GALNAC1
PLEKHG3
SYBU
EIF3F
FNTA
OR9A4
ZNF830
CCT6B
TMBIM1
MARVELD1
RASEF
RDX
KLF10
HEXA
CCDC59
BIRC3
URM1
HOOK2
JUNB
CSRNP1
STX6
TMEM63A
CYP27C1
TBC1D2
COLEC12
ZSCAN22
SEMA5B
MAMDC2
POLR2J2
RTF2
PRKRIP1
PKP2
SOX9
FAIM
TFAP2C
SPATA25
NEURL2
CTSA
ZSWIM1
RPS26
ZNF165
OR1F12
TJP2
TSFM
TSN
E2F8
UNKL
IRF2BPL
C16orf91
TPRN
TMEM203
NDOR1
REXO1
OR2W3
MMP10
WDSUB1
SPNS1
LAT
ZNF585B
ZNF383
GOLGA7B
NAB2
PLEC
RHOD
SLC25A53
FAM199X
C5orf63
ZNF789
ATP5MF-PTCD1
ATP5MF
TBRG4
GABARAP
ELP5
CTDNEP1
ERCC1
DMAC2
ERICH4
WSB2
WDR53
FBXO45
PES1
PHTF2
PTK2B
ERP27
IGFL1
ZBTB7B
LENEP
MEOX1
STX1A
RAB3IP
EIF4A2
SPTLC2
SMG8
CDC6
JRK
BRPF1
NT5C
WDR86
ART1
FAM83A
ATG14
COMT
EVPLL
ZNF335
KRT31
DOK3
DDX41
SLC35F6
MEAK7
OPA1
SEPTIN9
NKD2
EMC4
FAM162A
CCDC58
TNFAIP1
IFT20
UBC
TMEM97
GADD45A
AXL
NUP107
GSDMD
LZTR1
FOXO6
CCDC185
STON2
ARNTL
LAMA3
HR
GRAMD1A
COPS3
TMEM205
RAB3D
CCDC159
ATP6V1G1
OAZ3
MRPL9
TBC1D14
NOTCH3
GOLGA3
DBNDD2
GTF3C5
CLCN5
TNFRSF1A
SYT1
RHEBL1
KMT2D
DUS2
DPEP2NB
DDX28
COPZ1
STAT6
ITGB3BP
EFCAB7
TOP3A
SMCR8
NOL12
TIMM21
FBXO15
UVRAG
NDST1
CD109
BCAS1
KIFC2
CYHR1
NRDE2
SRI
DUSP6
DPP8
NDUFA9
AKAP3
SUMF1
SYNCRIP
LTO1
BRIX1
SLC27A5
ZBTB45
PPP1R11
RNF39
EFR3A
TRMT1
NACC1
RETNLB
SUSD1
KRT1
CCNT1
REEP4
GTF2H3
EIF2B1
TGFBR2
GFM1
NUDCD3
NTSR2
IL20
TRA2B
NOP16
HIGD2A
NDUFB3
FAM126B
HUS1
ZSCAN25
KRT80
ZNF436
BCKDK
NME1-NME2
NME1
KAT8
RNPEPL1
DUSP28
ANKMY1
METTL1
EEF1AKMT3
CYP27B1
NFKBIA
COLEC11
UPP1
SEMA3B
LSMEM2
DUSP2
ASTL
UGT1A6
CIDEA
RALGDS
VPS33A
ECHDC1
DPP3
CLDN9
CLDN6
LRMDA
ITPK1
UQCRHL
UPK3B
CYP4X1
SLC24A1
INTS14
IKBKB
ALDH3A1
TXN2
NUGGC
ELP3
ZGPAT
ARFRP1
SREK1IP1
CWC27
VCAN
MMP13
TCF24
PDE6D
COPS7B
CBLC
C20orf85
PLEKHH2
AGAP3
ATP5MG
LGALS8
TINAGL1
HSPBP1
BRSK1
MALL
APOBEC3H
KALRN
GSC2
GABRR1
ZNF260
PDAP1
BUD31
GSN
CYP24A1
ANXA1
MTRNR2L9
BNIP3L
D2HGDH
TIPARP
PPWD1
CENPK
LSG1
METTL2A
PARG
NPAS2
PTPRF
DDX46
ALDH3B2
HACD2
SCNN1A
LTBR
DCTN6
NFE2
AP5S1
GINS1
KCNAB1
TJAP1
NIBAN2
OXNAD1
DPH3
RWDD1
SLX4IP
MKKS
RNF40
CCDC189
DYNLRB1
PTK2
VAC14
CCDC97
ZP3
EXOC6B
ITFG2
RPS5
ZNF514
ZNF2
STMN3
RTEL1
PRSS22
PLA2G2A
BTNL10
HCAR2
TNRC18
AGPAT2
PYDC5
IFI16
EFHD2
INTS1
ANKK1
TRIM17
TRIM11
TFPT
PRPF31
CAV3
RAB11FIP2
MTHFD1L
NPAS3
DNAJC11
XAB2
STXBP2
PCP2
MRPS15
MTA3
KCNG3
ZBTB46
VPS8
CEBPA
SART3
ISCU
LRRC23
PGK2
RTN4IP1
QRSL1
TRMO
MRPS7
MIF4GD
GGA3
PSMA1
PDE3B
SF3B3
COG4
TCERG1
FOCAD
BZW2
ANKMY2
FXYD3
CDK12
MED1
CALML5
EIF1AD
CST6
BANF1
TMEM178B
GUCA2A
EXOSC5
BCKDHA
KYAT1
PTPRB
LRRC8A
PTP4A1
NDUFS3
KBTBD4
FAM180B
SLIRP
ALKBH1
TANGO2
ARVCF
STEAP3
SERP2
DTX4
SCRN2
PPL
METTL27
METTL2B
CCDC174
FAM98B
CLDN4
GLCCI1
HABP2
TAF2
SP6
ATAD2
ARID3A
TTC31
CCDC142
MRPS33
SLC25A51
ANK3
PRR15
ERAP1
STK24
PRKAR2B
NR2F1
ERG
TRIP4
PCLAF
TMCO6
NDUFA2
IK
VGLL4
NDUFB5
MRPL47
DNAJC19
NUP214
PDCD6IP
CACTIN
SULT2B1
EDARADD
PSG9
FLRT2
TMPRSS11A
ITM2C
TUFT1
ABT1
LY6D
PIM1
PLEKHA7
MAP3K7
FEM1A
KRT39
MB
ATP13A3
SLC2A4RG
LIME1
PHB2
NCAPH2
LMF2
LIPK
TRIM6-TRIM34
TRIM6
MUC3A
PSME3
BECN1
ZNF608
BNIP1
TOMM6
PRICKLE4
FRS3
MINK1
C5orf51
DOK7
RGS14
LMAN2
TSC1
GFI1B
MRPS10
TNFRSF10B
FAM184A
MFSD10
PIKFYVE
DNAH5
MBD6
DDIT3
BRF2
TMUB1
FASTK
EHF
FSCN1
PTPRH
ALAS1
ZNF408
ARHGAP1
KRR1
FOS
MUC20
RPL26L1
OR2M2
MCC
FUCA1
CASP5
MB21D2
IRF2BP2
SLC25A11
RNF167
PFN1
TMEM208
LRRC29
ENO3
AMOTL2
ZNF17
HERC5
CCND3
TAF8
MED4
TLL2
ALG10
SCRN1
SPARCL1
ASH2L
TRIAP1
COX6A1
METTL6
EAF1
TARBP2
NPFF
MAP3K12
CCDC192
SEMA3E
MRPS11
MRPL46
USP31
TRMT12
IPO11
DIMT1
IL1F10
ATF6
ADAMTS16
LENG9
CDC42EP5
FGF1
SUPV3L1
CYP26B1
HIVEP2
PAXBP1
SAMD10
PRPF6
PHLDB2
HEXB
NAT1
IP6K3
RARG
HSPB1
ABLIM1
FBXO11
ANO1
AAAS
MRPL21
IGHMBP2
MAPKAPK5
ANXA3
ABCB11
IGSF10
PDLIM2
NOXO1
LDHD
RPS14
CENPBD1
TBL3
RPS2
RNF151
CD93
GOSR1
MPPED2
CEP162
AP3S2
TRIM55
VWCE
TJP1
SERP1
EIF2A
ZG16B
PUM2
ZNF365
MRPS35
SLC5A1
RNASEH2C
KAT5
FZR1
DOHH
CRTC1
ZNF497
A1BG
NVL
CNPY2
CAPN14
ZRANB2
SLC12A4
B4GALNT3
NDRG1
TBCK
AIMP1
PRKG2
ARL14EPL
USP30
DDX23
STYXL1
MAN2C1
GPC1
SNRPC
ADAMTSL4
LMNA
SMG5
TMEM79
ZBTB20
PPCDC
TMEM262
KRT86
NCBP2AS2
NCBP2
VARS2
GTF2H4
ZFHX3
SENP2
SGMS2
ANKRD22
BAIAP2
TNFAIP8
INO80D
ANP32A
BAMBI
SPTLC1
RIPOR3
MAFK
RPS11
RPL13A
MUC4
ELAPOR2
CTSD
PPIH
NUP54
CCDC88B
UBQLN1
SEC13
POU5F1
KIAA1217
TBL2
NCOA3
TAGLN2
SNRPB2
STAM
AP5Z1
AGTPBP1
CWC25
IL36B
SLC26A11
SGSH
SLC20A1
EPS8
KDM3A
ZNF3
COPS6
TMEM207
KLF3
ICE1
WDR75
PSMD12
OR6B2
NDUFA10
DOLPP1
ARL1
ECHDC3
ORMDL3
GSDMB
TSPAN15
UBE2L3
RBM42
MED18
CD86
EXD2
RPL23A
RAB34
PROCA1
ZBTB38
TLCD1
NEK8
DIABLO
MCM7
AP4M1
C7orf65
TMEM60
LZTS2
PSRC1
P2RY2
EPN3
BCAR1
ZMPSTE24
TMCO2
IQUB
BBS1
PPP4R1
METTL3
CREG1
ABRA
PHAX
ALDH7A1
SLCO4A1
PSMD1
RPLP0
GCN1
MAPKAPK3
CISH
ZC3HC1
TLE3
AGFG2
RBX1
LOC100129484
SMTN
MDGA1
GADD45GIP1
PAN2
IL23A
TMX2
MED19
EPHX1
RPUSD4
FAM118B
TPST2
ENPP3
MED23
DSTYK
UBOX5
FASTKD5
FAM153B
GNG4
COPS4
WDR83OS
WDR83
MAN2B1
MRM3
GLOD4
SPTBN2
UPK1B
SLC52A3
SMIM41
ATG101
C19orf48
RBM19
TMEM69
GPBP1L1
AAR2
ZSCAN21
PSMD6
VMO1
PSMB6
GLTPD2
LY6L
KLF9
NGB
OBSL1
SSNA1
ANAPC2
CPT1A
INHA
BCL6
GRK7
PROSER1
NHLRC3
APCDD1
MAP2K3
RPS21
LYRM4
FARS2
GPBP1
ASAP1
ZNF385B
CCNDBP1
SDHC
MPZ
SMG7
DGAT2
PLXNB2
KDM2A
CCAR2
C8orf58
PNO1
LONP1
CATSPERD
PIM3
PDC
PAG1
BMS1
TMEM242
RAD52
TUBG2
PLEKHH3
ALDOA
GGA1
PNKD