ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5930141 | RH-4
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◣ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

ARID3B
PNMT
PGAP3
EN2
WASHC2A
HEXA
PDGFB
BHLHE40
ERCC1
LAMP1
PURB
AP5Z1
KCNMA1
DUX4
SPATA25
NEURL2
CTSA
ZSWIM1
DERL3
TNC
WASHC2C
MYLK2
VASH2
SSUH2
TNNC2
SNX21
STRA6
ARID5B
MACC1
MEOX1
HEYL
RBM20
IGLL5
GET4
DYNLRB1
ARID3A
ZHX2
BRF1
BTBD6
SLC1A7
TGFB2
SUMF1
RNASEH2C
KAT5
ZNF668
ZNF646
XRN1
CLCN7
ANGPTL4
CORO7-PAM16
CORO7
PRR5L
COMMD9
BMERB1
TRIOBP
SSU72
FRG2C
ITM2C
RMI1
HNRNPK
MTRNR2L1
WBP1L
PPCDC
CELA3B
PEDS1-UBE2V1
PEDS1
TGIF1
MYEOV
KRT86
SYNPO
SACS
CLN3
APOBR
TMCC3
C1QTNF1
RMND1
ARMT1
DENND2B
SRP9
PYCR1
MYADML2
MSS51
RIPOR3
CRIP2
ENTPD4
RRAGC
E2F2
ADAMTS14
PVALEF
AATK
COL1A1
NAV1
NTRK1
INSRR
ARHGAP25
GADD45A
PIPOX
RBPJ
TRMO
SEMA3D
CHMP1B
FRG2B
MTHFR
CLCN6
HMOX1
TP53AIP1
MTRNR2L2
MSH3
DHFR
SLC8A3
TCAF2
VSTM2L
BCL3
MYOG
TCF7L2
TMEM120B
FHL2
FRG2
VPS33A
ATP6V0C
AMDHD2
MFSD2A
SEC22B
CDRT4
THEMIS2
LCA5
USP2
NAGPA
ZNF507
LIMK1
APOE
APOC1
DOK7
TMEM91
PTCH1
B9D2
RIOK2
RINL
SLC35A5
ATG3
HAGH
FAHD1
CA11
SLC27A1
FSCN1
TMCC2
ETV4
PRKAG3
CCIN
PCBP4
GPR62
BAIAP2
UPP1
CPA5
BMF
FHL1
FSCN2
TMEM239
C20orf141
MTRNR2L8
SPNS1
LAT
SULF1
BAHCC1
TBL1X
ARHGAP31
SYNPO2L
MYOZ1
SMAD7
EVPL
EZR
MEF2D
BAX
PPL
PRUNE2
CD44
HNRNPH2
WBP2
DAB2IP
NPAS4
SCHIP1
ASF1B
ASB2
ATF3
MB
DAG1
FGF6
IFNAR2
ACTC1
CRYGN
ATP6V0D1
AGRP
CLIP1
SYNJ2
CEP162
PRUNE1
MINDY1
TBC1D1
MLLT6
UBE2Q1
CHRNB2
TINAGL1
KLHL41
CARD10
BCAR3
NUDT4B
RBFOX2
HCN2
TRIL
MYBPC2
LRRC47
DTNA
B3GALT5
B3GLCT
KLHL30
MXRA7
GGA2
TSPAN31
MARCHF9
CDK4
ABCC3
VAMP2
PER1
SPAAR
HRCT1
BMP7
TNNT1
TNNI3
FRMPD1
CCN2
INO80C
JUP
NUDT14
JAG2
SPON2
CYB5R1
ADIPOR1
RHEBL1
SH2D3C
TMEM167B
CHST12
SH3PXD2A
FLYWCH2
LNX1
RPL24
DHRS3
FOXS1
ACSS1
STUM
SPRY4
NFIB
ITPK1
FREM1
HIF3A
EPHA2
SPINT2
COL16A1
GPSM1
CD82
ACOT9
IFIT1
ECT2L
FOXB2
PLXNB2
MAD2L2
DRAXIN
NES
ZNF358
MCOLN1
ABLIM1
AFAP1
NEK6
IZUMO2
INKA2
CAND1
NOL4L
RDH5
ITGA7
BLOC1S1
CELF2
TBC1D5
COL4A2-AS2
CRYBB1
RHOC
CDCA7L
CREB5
COL23A1
NR4A1
CYP27C1
NAA38
CHD3
UXS1
SOBP
NNMT
CNN3
NOTCH2
PALLD
ITSN2
NR2E3
VSIR
OPRD1
ARHGEF2
SOAT2
IGFBP6
NNAT
BLCAP
ESPNL
SLC12A3
BMP5
MAFK
SLC12A7
GPR61
HHIPL2
CADM2
PKMYT1
ABHD2
ADAMTS1
CNP
HES1
NAV2
FLNC
MAFF
NGFR
RARA
MYOD1
KRTAP2-4
MFSD1
ARHGAP28
DGLUCY
SPRED2
IQSEC1
SPTAN1
HOXC13
TNRC6B
TGM2
C22orf31
LFNG
CKMT1B
EXOC7
SERTAD2
BTG2
RASGRP4
RYR1
EYA1
HNRNPD
ETFRF1
CFAP94
STARD3NL
SELENON
TRIM62
CPA1
ARID5A
ATP13A5
EHD1
TACSTD2
RFTN1
KIAA1671
HPS5
GTF2H1
VPS11
ETS1
CXCR4
TEX46
KDM1A
L1CAM
PALD1
SKP2
LMBRD2
MINDY2
ENTPD2
GUCA2A
HERC5
KIAA1522
MYBPHL
LBH
FAM110A
AMOTL2
INTS12
GSTCD
RANGAP1
SMARCD2
SMYD1
HEXB
TRIM55
CDC42EP1
ZNF609
CCNI
POLR2M
KMT2E
ANKRD1
ENGASE
SBK3
SBK2
TXLNB
ZNF280A
SCN3B
LMCD1
STC2
TBC1D2
TP63
FADD
AADACL4
ID3
ADCY7
CITED2
YBX3
TNNI1
PDZRN3
KANK2
SELENOW
ZNF385A
ZAR1L
BRCA2
PROX1
DUSP5
TBC1D9
MYCL
SPATC1L
ATP6V1C1
SNAI2
KAZN
CELA2B
TMEM40
CYGB
PRCD
MAST4
RBM38
JPH2
PIP4P1
OSGEP
APEX1
SMAD3
DAAM1
LSMEM1
FAM184B
CDH11
WASHC5
NSMCE2
KSR1
DUSP1
AMOTL1
GRN
SYT8
KDM3A
STBD1
RGMB
NTSR1
PGS1
HMX3
TBC1D19
TNNT2
SETD5
EPHB2
SHLD1
COMMD4
OR4D6
RXRG
UBE2H
CELA3A
GLRX
DAPK1
ST3GAL5
ZC3H7B
HSBP1
CPD
HMCN2
TSC22D3
ZBTB18
ALDOA
LOC112694756
PCIF1
ST3GAL2
PLPPR1
ARID1A
TMEM275
SYCP2
FAM217B
PPP1R3D
MNAT1
INTS10
KCNF1
MYBPH
DUSP6
PRRC2B
FRMD4A
PRMT1
ADM5
PTP4A3
IL32
NCAM1
SLC2A10
RIN2
CSRP1
UNKL
TJAP1
ITGB3BP
EFCAB7
LRIG1
ADAM12
SLC4A2
CDK5
ASIC3
IKBKB
DYSF
WSCD1
UQCRHL
TMEM205
RAB3D
CCDC159
RGS20
ATP6V1H
TRAF4
SNRPB2
CXXC5
KDSR
ZNF32
SLC2A7
SYNGAP1
PHF1
CUTA
ATRN
MRPL44
MYH7
TMSB4X
S100A2
NFIC
TCEAL7
LACTBL1
ANXA2
ATP6V1G1
SOX8
ANKRD29
TYMS
SSX2IP
LMF1
HEXD
GLIS2
ABAT
ADGRF1
EXOC2
P2RY1
GPER1
VGLL4
FOXN3
TCF4
NUTM2G
PNP
WNT10A
SEMA5B
FAM240C
MAP1LC3C
MSMO1
SUPT7L
SLC4A1AP
ECE1
LTBP1
SLC19A3
RASL11B
BCAM
LTBP2
GLIPR1L1
CAPS2
JUND
ZNF555
POLR2E
GPX4
ABCC10
RAD9A
PPP1CA
KANSL3
FER1L5
OBSL1
SLC6A9
FUT10
MYL4
IL26
TET3
USPL1
HMGB1
BCL9L
SSTR5
IFT52
PADI1
INMT
CRYAA2
CRYAA
ZNF205
IGDCC4
CFLAR
ARHGAP24
EPHA3
FGF8
PHLDB2
KLHL12
TGFBRAP1
C2orf49
GXYLT2
CEL
SMTN
ISLR
CCDC33
RALGDS
TRIM16L
SPG21
TNNI2
TXNIP
CSNK1D
IFNAR1
MTF2
IFNLR1
PEX3
ADAT2
RGS3
RBM28
SPATS2L
GFRA1
LIMCH1
EFNA3
RERE
METTL7B
GTF2B
SLN
SNAI1
PROSER1
NHLRC3
MARCHF8
PSMD3
PHC2
KANSL1
MAPK10
SSBP1
TNK2
C10orf67
MRPL23
STYXL2
GPA33
NT5C2
ZNF292
CEACAM21
TOGARAM2
PTGIS
SECTM1
PSEN2
RPUSD4
FAM118B
VPS50
HEPACAM2
NDUFA4
TIMP2
SIX1
SH3GLB2
CCAR2
C8orf58
PRDM12
NFATC2
MSC
JUNB
ATP5IF1
TMEM82
SLC25A34
RBM24
PELO
NINL
ITGA1
CCNG2
SELENOH
ICE2
C2CD2
LIMS4
LIMS3
TPP1
TAF10
TBC1D30
GNS
SLCO4A1
ZG16B
PTPRD
ELOVL6
NPPC
RNF223
COLEC12
RHOQ
ATP6V1E2
MRPS23
SHB
CLDN5
TSC2
NTHL1
SLC9A3R2
ERICH1
FLNB
GSN
CDK9
SLC50A1
EFNA1
LAMA3
OSBPL7
MRPL10
LRRC46
PLAGL1
ANKRD12
TTC12
RPP40
RDH8
GLS
COL5A3
ARMCX5-GPRASP2
ARMCX5
CDH13
C1QTNF8
LRP5
PLAU
MGP
LURAP1L
SUGCT
MPLKIP
NUTM2F
TUBG1
RETREG3
MUSTN1
ITIH4
NFIA
ILF3
CHMP2B
RCBTB1
SEPTIN9
MDM2
ATP6V0D2
ZNF775
GEMIN6
IRF2BPL
DES
CALM2
TACR3
TMEM63C
HMGCS1
CRBN
RNASEK
C17orf49
CRACR2A
COL6A1
IPP
MTRF1L
HES6
IRF9
MC2R
MYLK3
TCAP
PPP6R1
E2F6
FOSB
COL15A1
RAI14
ECH1
DDX20
LTBP4
TMSB10
ALLC
SERPINE1
SYTL3
ARHGEF10L
SLC22A8
NOTUM
LOXL4
PAFAH2
TRMT10B
LRRFIP1
SETD1B
RHOF
TBPL1
SORCS1
PPP1R3A
NAGLU
GGTA1
BORCS7
PSAP
STMN1
IRF7
PMEPA1
TMEM39B
TMEM250
RASGRP3
SH3BP4
PLEKHD1
TBKBP1
GET3
ZBTB40
WRNIP1
MYLK4
BEST2
HSPB1
VWA3B
BIN1
RASSF4
GKN1
THOC1
RIPOR2
MRPS18A
SLC9A8
SYN2
OCLN
SLC7A5
UFSP1
ACHE
NOXO1
SYNGR3
GFER
STN1
SEMA3G
CDC42EP3
PUSL1
ACAP3
VGLL3
AZIN1
FAM120B
DLL1
TSR3
GNPTG
C5orf51
SSBP2
GAA
PTK6
KIF17
WSB2
COMMD2
COPS4
CGGBP1
C3orf38
AMPD3
CLMN
PDE4DIP
CLTCL1
SRSF7
ATP8A1
PPP3CA
UTP18
MBTD1
RBSN
PGF
NOG
ARFGEF2
ZP3
TNFAIP8L1
LOXL1
TM4SF18
LRRC71
DGKB
WWOX
PARD6B
PSIP1
MAMSTR
CDK5RAP1
LSM12
G6PC3
STAT1
HUNK
TTC9
PNOC
ELOVL3
PKM
UVRAG
ZNF217
CAV3
ZNF92
RGS9BP
ANKRD27
MLXIPL
SMOC1
PRR18
CNMD
AASDH
NUP107
FZD1
CORO2A
BCAT1
ADNP
RCN1
SYNE3
ADORA2B
ZBTB7B
LENEP
METTL9
C5AR1
TTYH3
IL2RG
FOXO4
EGFR
OTUD7B
MN1
LIPE
LRP5L
CTHRC1
ACKR3
TSC1
GFI1B
TOR1AIP2
TOR1AIP1
LZTS2
BEST3
PELATON
PDLIM7
DRD2
CAPN2
RPS7
SREBF1
SHPK
CTNS
VTA1
NMBR
B9D1
PROM1
MFAP4
MAPK7
TSPAN33
UBE2V1
STING1
VSTM4
ARHGAP23
KCTD14
MPPE1
ATP2A3
GABARAP
PHF23
DVL2
SH2B1
SLC24A1
INTS14
CELA2A
C20orf204
NFE2L2
PTPRE
CHRNA1
GTF2A1
MAP3K7CL
TMEM210
LRRC26
LPCAT1
RNF217
GDNF
KDM4C
APP
MTFR2
PLAT
ARSG
GRAMD4
HRH1
TANK
KIAA0754
TTC26
MIDEAS
RPL27
IFI35
TXK
USP15
RBMXL1
KYAT3
ZNF366
VWA5B1
SYT7
HPCAL1
CSNK2A3
YARS1
S100PBP
RTN2
PPM1N
HSPB7
CLCNKA
SIRT2
NFKBIB
TBX2
SAV1
MYOM3
RARB
MADD
SLC1A5
NACA
SYNRG
MRAS
TACC1
OLFML2A
NR6A1
NDUFV2
RAD21
LRRC56
HRAS
RAB11B
AEBP2
AKR1B15
TRIM72
PYDC1
ELAC2
NBPF1
PFDN4
SPRY1
DPYD
PUM3
IRF2BP2
RPS12
NRAS
CTRC