ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX059713 | VCaP
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◣ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

RAE1
MTRNR2L3
PRICKLE1
HERC3
PYURF
PIGY
PMF1-BGLAP
PMF1
ARHGEF7
KDR
NUDT3
SLC45A4
FBXO46
MEIOSIN
ZBTB7B
LENEP
SCGB3A1
NOS2
SLA
DUX4
ASIC2
ARID3B
DNPEP
LGALS8
RTF1
NGB
GSTP1
BHLHE40
CALML5
MESP1
BCL2L13
SEPTIN9
PMM1
CXCL8
APBB2
GRM3
UMODL1
CDH4
PPP1R14B
LOC114841035
FKBP2
VEGFB
DNAJC4
KSR1
FRMPD1
TENT2
RUVBL1
EEFSEC
SLC2A10
APP
SMYD1
KRCC1
LAMA3
LFNG
IL24
SLC22A10
MCF2L
CREB3L1
ACSL3
SELENOS
TNK2
APOLD1
MTRNR2L1
MRPL24
HDGF
PCDH7
NLRP5
KCNQ3
TMEM40
HIGD1C
SAXO2
EFL1
PRDM14
SYCP2
FAM217B
RTL1
PTTG2
POLR2J3
TMEM216
HERPUD2
GABRA2
LOC102724770
DGCR6
EXPH5
FMN2
SCUBE3
ZBTB18
GDF15
POLR2J2
ZIC5
SASH1
CDKN2AIP
MAMDC2
TMEM262
NFIC
ARNTL
EIF4EBP1
AGPS
ISX
COL28A1
ZNF511
TUBGCP2
CFAP74
FKBPL
ATF6B
ETV5
UGT2B10
NPTX2
WDR74
STX5
UTRN
GRAMD1A
LOC388282
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
RASGEF1A
RHOT2
PDGFA
PPP1R15B
MTNR1A
SCIMP
ITLN1
EAPP
ULK4
IFT43
TGFB3
PXDN
DUSP6
PTPRN2
LIMA1
HDGFL2
TMEM42
TGM4
RHOH
GHRHR
SOCS2
SKIDA1
OR13G1
JPH3
ATXN2L
KANK1
PLIN1
PEX11A
WDR93
SBSPON
FAM214A
MBOAT2
HEG1
ITGB5
PHTF2
TMEM60
MUSK
BDNF
OXGR1
MAX
HMGN4
LPCAT3
RSPH14
RAB36
NOVA2
TLK1
ARHGEF3
ALDH3B2
C19orf12
AFAP1
MILR1
KRT3
TM7SF2
STAU2
CCZ1
TACR1
ERCC1
B3GALT5
UGT2B28
KCTD7
SLC16A8
PPDPFL
CPLANE1
PYCR2
SUPT7L
SLC4A1AP
PALLD
LGI1
KIAA0408
DAB1
ZNF771
COA3
CNTD1
FOXN1
PDXK
TPRA1
MCM2
LNX1
PRRT1
PPT2
DPP9
KCNH8
RAB37
SHLD2
GLUD1
PTPRR
TMEM87A
GANC
COL21A1
OR6V1
SRSF10
AGFG2
TIMP2
MMP17
MSX1
MFSD4A
C1QTNF9
FAM222B
SOX8
ZCCHC14
SPAG9
DDX19B
AARS1
ACSBG2
STX16
SCAMP2
PEX10
REG1A
CDCA7L
SORL1
TPCN1
FAM234B
FOXN4
TBC1D30
GNS
UNC45B
NLE1
MLF1
RRBP1
BANF2
DPRX
OR1L1
STC1
CACNA1D
EDARADD
ATP5MC1
C3orf14
FAM3C
UBE2Z
TMEM217
TBC1D22B
ARHGAP22
ZNF559-ZNF177
ZNF559
MX1
STK32A
NUP160
ATAD2
DIPK1A
NBPF4
RFPL3
SUSD4
ITPRID1
GLYATL1
LRRC25
XRCC4
TMEM167A
FBXL3
NFIX
MTRNR2L8
TMEM268
CPLX1
WIZ
DPY30
KRT4
USP36
SPOCK2
LGALS7B
NBPF6
CITED4
SPDEF
RB1CC1
SHOX2
RSRC1
ART1
SNX16
FNDC10
LAX1
GPT2
OTOL1
TFF1
PFKFB3
PIWIL1
CEACAM5
TMED9
ELOVL7
B4GALT7
ARID3A
PRKAG2
HIVEP1
KLHL29
OR2W5
MAP7
DHRS3
TEPSIN
NDUFAF8
TYW3
CRYZ
MRAP2
GNAT3
SSH3
SGK3
SCNN1A
LTBR
FNIP2
EPHA4
DAPK1
ZNF155
ST6GALNAC6
ST6GALNAC4
MTRNR2L2
MSH3
DHFR
COL23A1
CYB5B
ZNF845
MTFMT
MAPKAPK3
CISH
SIRT4
LIX1L
POLR3GL
ANKRD34A
IMPDH1
DAOA
ZZZ3
IFRD1
SPHK2
DBP
MAPK12
COG1
NR2F6
ANGPT1
OCEL1
SPIN1
SGK1
MEIS2
SYK
PAX6
LRRC32
TRNP1
TLE4
TAOK3
TSC2
NTHL1
SLC9A3R2
ADAMTS3
VAV3
KRT39
IAPP
SKIL
ESRP2
UPK3BL1
SPDYE2B
SPDYE2
IQANK1
FAM83H
TRABD
MAPK15
CNP
UPK3BL2
TMEM237
SAMD12
CHAC1
CPA6
IRF2BPL
FBXL20
MYH10
QSOX1
CYP3A43
FAM25E
FBXW8
ELAC1
SRI
ECE1
C6orf58
NWD1
SH2D6
CAPG
GYS2
ACY3
NBR1
CCDC190
RAB32
TASOR
MRPL1
KCNIP2
RPS27
RAB13
IER5
TMTC2
KRTDAP
HEY2
PIWIL3
MARK2
AKAP12
PAK4
PRKAR1B
TBPL1
MYO7B
ZNF207
C17orf75
IWS1
RND3
PAFAH1B2
BACE2
PARP1
EPHA5
TBCEL-TECTA
TBCEL
TRIQK
ARHGEF38
RGPD2
RGPD1
RGS19
OPRL1
LKAAEAR1
C7orf65
GDA
RXFP4
KHDC4
WDR77
ATP5PB
PYGL
ERICH5
IGFBP7
DMRTA1
PKP2
ZBTB20
RFESD
POU6F1
SLC35F6
C11orf80
FFAR2
TMEM106B
SNIP1
DNALI1
TLE3
RIN2
MTFP1
GZMB
CD8B
CPT1A
LAPTM4B
SOD2
TFCP2L1
ITSN1
CRYZL1
STPG3
NELFB
FAM166A
CPEB4
KLK3
MYO1G
TIAM2
VAMP2
PER1
VAT1
RND2
CD177
FRG2
NUDT16
B3GNT6
DCDC1
ASPHD2
TMEM92
VPS37C
S1PR1
ELANE
CFD
CADM1
EPHB3
FAM53C
CDC25C
LINC01638
IGIP
SLC25A45
FRMD8
FREM1
XDH
SUN5
SLC30A8
BPIFB2
AARD
TNFSF15
CDC42EP3
CDC16
MEMO1
LAMP3
NR3C1
DOCK9
BUB1B
MGAT5
THAP9
SEC31A
SLC30A4
CAPN5
CTRL
TMPRSS12
RUFY3
CTXN3
CCDC34
CA1
RND1
CDRT4
SSTR5
SMIM13
MAPK9
ELMO2
MEF2A
FLOT2
DHRS13
TMEM62
SLC36A2
PRSS23
PANK1
C2orf73
LDHC
RDX
ARHGAP40
TES
TCAF2
OTULINL
PRMT8
GUCA2A
TSPAN5
PLAAT3
SIDT1
ELL2
SEMG2
ACACA
MMS22L
OR4C3
IRS2
TMEM14A
LDLRAD4
ERGIC1
NIBAN2
HERC5
GGA1
ENPP2
ADRA1B
PPP2R2B
LITAF
ZMYND8
TRAPPC4
RPS25
RTN3
ATL3
PIK3AP1
CYRIB
MTHFS
SLC37A4
SIVA1
C11orf24
AHCY
STARD13
PRLHR
LTA4H
RNF19A
NEK10
BIK
AKNA
ERICH2
MAP2K6
CLIP1
ARID5A
PRKCD
ZNF200
LDLRAD1
JRKL
CCDC82
KLRK1
COL2A1
CMBL
PRR7
DBN1
RAB11A
TDGF1
PTPN3
GAL3ST1
SPRED2
TMEM39B
KAT6A
KIAA1217
TCIM
NOXA1
SLCO4A1
PPFIBP2
FURIN
LRRC69
REXO2
PLA2G3
NKX6-3
INPP5J
NR1D1
TMEM45B
EPN1
CEACAM3
GPRIN2
ASPN
PPCDC
KIAA1522
PRRC2B
PMVK
MACROD1
MSH5
DDAH2
CLIC1
ST6GALNAC3
NIPAL2
MB
GRHL2
PIP5K1B
SOCS7
FGF19
PIWIL2
DNAH5
HSPA4
MIA3
TEX38
AMBP
STAT2
APOF
CELA3B
BCL6
CERK
NAV3
MYEOV
ATP6V1E1
TRPT1
NUDT22
SPAM1
POU5F2
MMP8
NEDD4L
GFRA3
ATP6V1G1
EBAG9
THRSP
TJP2
TAF12
DCAF10
ACOX2
MUC3A
TMPRSS11F
TSPAN9
AMBN
MKNK2
TTC3
SLC2A5
PIGP
CDS1
DAPL1
FAM47E-STBD1
FAM47E
PRSS27
CEP85L
DNAJB4
TM9SF3
IL17RD
SCRN2
BCL2L1
SP6
ZNF541
NEURL1B
PEAK1
HMG20A
ARSG
SLC16A6
TXK
ZNF619
GMNN
THSD4
ADAM17
FCGBP
CCDC74A
TCP11L2
CELA3A
SLAIN2
ING1
CARS2
RIPOR2
NFKBIL1
DDX39B
ATP6V1G2
TMEM210
LRRC26
SULT1E1
UTP20
COLCA2
FAM25A
PRIM1
HSD17B6
GGACT
MS4A7
SPTLC3
GABRA1
YBEY
MCM3AP
SLC39A13
POLDIP3
HELB
RAPGEF3
TRIM44
SLC48A1
NBPF1
FBXO32
KLF9
PPP4R1
TYRO3
PNLIPRP1
GPRC5A
SMG6
SLC27A5
ZBTB45
CAMK2N1
SMIM34A
NREP
OSGIN2
ZBTB21
KLHL35
GDPGP1
CIB1
FAXDC2
SERPIND1
FAM107B
DSG4
PDZK1
CD160
CD276
IKZF3
HEXA
GABARAP
ERBB2
PNMT
PHF23
DVL2
MIEN1
ALDH18A1
GRB7
LAMP1
HNRNPA2B1
CBX3
GET4
SLC39A10
ELP5
CTDNEP1
EPC2
WDTC1
AP5Z1
DDX17
EIF4G2
STRBP
SLC25A25
NAIF1
SEPTIN7
TMEM199
SEBOX
POLDIP2
WASHC2A
RNASEH2C
KAT5
KIF5C
WASF2
TCAP
MRPL45
WASHC2C
HAGH
FAHD1
ERAL1
UBE2Q1
CHRNB2
SPATA25
NEURL2
CTSA
KCNK4
GPR137
BAD
TSPAN31
MARCHF9
CDK4
ID1
SFSWAP
GSK3B
ZSWIM1
PGAP3
UVRAG
ATP6V0D1
AGRP
NAGPA
TET3
RSF1
AAMDC
CD300LF
SPNS1
LAT
MSMO1
FRG2C
CRBN
RPGRIP1L
FTO
UBE3B
DAGLA
TRMO
RALGDS
RBBP8NL
RBM48
PEX1
MTBP
MRPL13
BCL3
ASB2
PSMD3
MDM2
PTPRF
LTBP2
RPS6KC1
TXNRD1
SUMF1
EFNA3
WBP2
MTHFR
CLCN6
ATF3
SLC35B1
LY6L
SYNGAP1
PHF1
CUTA
NECTIN4
IL1R1
SPIDR
MED11
CLCN7
HES1
SMARCD2
USP49
TOMM22
SCHIP1
C1orf174
DDX42
CCDC47
SRSF1
RPUSD4
FAM118B
C8orf33
GBA
ILF3
RIOK2
TNS3
STARD3
PPP1R1B
MEOX1
TRIB1
SPTAN1
ISY1-RAB43
ISY1
POLR3F
DZANK1
SERPINI1
PDCD10
PRR5L
COMMD9
RBBP5
HOOK2
RXRA
ABCC10
ELF3
CDKN1A
UAP1L1
MAN1B1
UBE2H
TOX2
LZTR1
STAT6
TSR3
GNPTG
MACC1
THAP7
ANGPTL4
VPS50
HEPACAM2
UNC13D
TRIOBP
CD55
NOL4L
ATG16L2
GADD45A
RHOBTB2
VPS33A
DYNLRB1
APOBEC3B
POLR2J
UNKL
FAM72C
FOXJ1
IRF2BP2
PIP4P1
OSGEP
AVEN
APEX1
SRGAP2B
FAM72D
SQSTM1
ZNF335
SLC35A5
ATG3
RARB
TRIM29
TBL1X
TMC7
TRMT2A
RANBP1
CCDC59
EN2
PGLYRP4
ZNF358
MCOLN1
FANCA
NOXO1
INO80C
PSMB7
GET3
CLPTM1
APOC2
PCIF1
AURKAIP1
SUPV3L1
SUPT6H
SDF2
MYCL
CYP27C1
GSR
MOCS3
DPM1
SNRPE
TFPT
PRPF31
DMAC2
ANXA2
CARD16
RIPOR3
IDH3B
RPS26
SLC25A11
RNF167
PFN1
PISD
RAD9A
PPP1CA
TRA2B
DAZAP1
PDGFB
RDH5
ITGA7
BLOC1S1
SPINK1
SMN2
SMN1
FCGR1A
REN
ERICH4
YJU2
NUP214
PURB
MRTO4
EMC1
SRGAP2
FAM72A
TBRG4
WASHC5
NSMCE2
SPIRE2
LYPD6B
VIRMA
PHRF1
BCKDK
FXYD3
ZNF408
ARHGAP1
ELFN2
C5orf51
SALL4
RGS3
XPO7
DOK2
UPP1
KMT2E
CLN3
APOBR
TRAF4