ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976678 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◣ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

IKZF3
MYEOV
MTRNR2L8
ERBB2
MIEN1
GRB7
ARID3B
MTRNR2L2
MSH3
DHFR
ID1
SSH3
ERAL1
SLC45A4
PNMT
TCAP
RBBP8NL
IRS2
TMEM199
SEBOX
POLDIP2
MTRNR2L1
TOX2
MTBP
MRPL13
KIF5C
TET3
SLC35B1
GRHL2
SFSWAP
NAGPA
TNS3
RAPGEF3
CD300LF
MRPL45
RBM48
PEX1
CRBN
C1orf174
TES
ANXA10
ISY1-RAB43
ISY1
NECTIN4
PSMD3
TMC7
REN
C8orf33
BHLHE40
ASB2
SPINK1
DUX4
ELFN2
BCL3
LTBP2
WBP2
UNC13D
POLR2J3
OSER1
GSR
TXNRD1
ANXA2
STARD3
PPP1R1B
TOMM22
ABCC10
SMN2
SMN1
PGAP3
SUPT7L
SLC4A1AP
POLR2J
SQSTM1
SCHIP1
SKIL
IDH3B
CDKAL1
SERPIND1
MED11
VPS50
HEPACAM2
BUB1B
GPATCH3
GPN2
KIF25
RPTOR
CDKN1A
TTC17
SPIDR
HES1
RIOK2
RGPD2
RGPD1
STX16
CARD16
PLA2G2E
UBE3B
IL1R1
ZDHHC6
VTI1A
RXRA
GPRC5A
TRIB1
SLC16A5
C19orf33
SPIRE2
ZBTB7C
FLOT2
DHRS13
GRAMD1C
EIF2D
POLR3F
DZANK1
SOCS2
ESRP2
GLTP
NOL4L
IER3
FLOT1
DHRS3
RARB
ZZZ3
CD55
BANP
CA5A
ELF3
GATB
FOXJ1
RGS3
CSF3R
PLD1
TRIOBP
EPB41L1
SLC25A45
FRMD8
C8orf74
PLAGL1
HAGH
FAHD1
SAP30BP
RECQL5
ATG9B
ABCB8
MBNL1
SNRPE
PSMB7
LYPD6B
LAMP1
SUPT6H
SDF2
RBBP5
SPHK2
RPL18
FAM83E
ZNF398
TAS1R1
NOL9
GRAMD2B
APOBEC3B
GET3
CDH18
ANGPTL4
BNIP3L
ATF3
SALL4
JMJD7-PLA2G4B
JMJD7
PLA2G4B
LIMA1
SPAG16
WASHC5
NSMCE2
CLPTM1
APOC2
BIRC3
OR9A4
TRIM29
PMEPA1
SLC25A53
FAM199X
RMND5B
EIF3H
TPRN
TMEM203
NDOR1
U2SURP
RAD51AP1
C12orf4
MRTO4
EMC1
EIF3F
NDUFAB1
TRIM16L
EPHB3
KMT5B
PLEKHG3
CSRNP1
HOOK2
MOCS3
DPM1
JUNB
RPS26
KRT1
MTUS1
ZNF789
ATP5MF-PTCD1
ATP5MF
WSB2
UBAP1
CLCN5
ZNF585B
ZNF383
PTPRR
MARVELD1
TMBIM1
UBE2H
IRF2BPL
DNAJC30
BUD23
YAP1
RTF2
OSBPL2
FAIM
ZNF830
CCT6B
SYBU
EIF5A2
CYP27C1
ATP6V1G1
SENP1
PFKM
RDX
CD109
GABARAP
ELP5
CTDNEP1
TJP2
PLEC
MEOX1
TRMT2A
RANBP1
TFAP2C
TRAF4
ITPK1
FAM83A
LANCL2
SEMA3B
LSMEM2
ERP27
CYP2A13
TMEM63A
KLF10
PKP2
NGDN
ITGB5
IGFL1
DBNDD2
PRKRIP1
HUS1
NAPB
RNF213
THAP7
STX1A
PISD
ST6GALNAC1
TSR3
GNPTG
POLR2J2
KLF6
SPATA25
NEURL2
CTSA
ZSWIM1
ZNF335
JRK
HEXA
PDAP1
BUD31
ZNF165
OR1F12
KALRN
C5orf63
NFKBIA
BRPF1
TSN
OAZ3
MRPL9
MAMDC2
TRA2B
STX6
NAB2
DUS2
DPEP2NB
DDX28
SEPTIN9
TBC1D2
RHOD
COMT
CYP4X1
ALDH3A1
MUC3A
DOK3
DDX41
KRT31
RETNLB
RAB3IP
HR
REEP4
NKD2
WDR53
FBXO45
SF3B3
COG4
PES1
PTK2B
NTSR2
SUMF1
ZBTB7B
LENEP
ZSCAN22
UNKL
DMAC2
ERICH4
C16orf91
CXCL5
MMP10
CCDC59
PRKAG2
AXL
LRRC23
FAM162A
CCDC58
CDC6
SPTLC2
PPP1R11
TCF24
RNF39
PHTF2
MEAK7
SPNS1
LAT
REXO1
TIMM21
FBXO15
CCDC97
CYP24A1
MMP13
FNTA
EFR3A
ZGPAT
ARFRP1
BCKDK
TSFM
KAT8
E2F8
SLIRP
ALKBH1
INTS1
SCNN1A
LTBR
SLC35F6
ATP13A3
EMC4
AGAP3
ERCC1
NME1-NME2
NME1
UQCRHL
SMG8
STON2
OPA1
MALL
RALGDS
TBRG4
VAC14
LTO1
ZNF436
GOLGA3
TMEM205
RAB3D
CCDC159
RHEBL1
KMT2D
GADD45A
TRMT1
NACC1
FOS
WDR86
CD93
NRDE2
C5orf51
NUGGC
ELP3
RPS11
RPL13A
EIF4A2
COLEC12
SOX9
TIPARP
STMN3
RTEL1
KRT80
FAM98B
NT5C
ARNTL
PSG9
SLX4IP
MKKS
DYNLRB1
IRF2BP2
LIPK
TFPT
PRPF31
MAP3K7
NOTCH3
GSDMD
DOK7
TBC1D14
GABRR1
URM1
TNFAIP1
IFT20
TMEM97
PRKG2
ITGB3BP
EFCAB7
PTPRB
HACD2
SCRN1
ZNF514
ZNF2
ECHDC1
GUCA2A
NOL12
MRPS7
MIF4GD
GGA3
UPK3B
MTA3
KCNG3
NPAS3
UVRAG
LZTR1
SEMA5B
DPP8
KIFC2
CYHR1
UXS1
NUP107
OXNAD1
DPH3
TAF2
STAT6
TJAP1
ATG14
RGS14
LMAN2
NDST1
GSC2
GTF2H3
EIF2B1
LRMDA
HCAR2
FXYD3
UPP1
TOP3A
SMCR8
ABT1
B4GALNT3
H2BW2
GRAMD1A
ALDH3B2
SRI
ZP3
KRT39
DCTN6
EXOC6B
MTRNR2L9
GOLGA7B
IKBKB
BTNL10
ATF6
RNPEPL1
DUSP28
ANKMY1
TANGO2
ARVCF
MRPS33
BRF2
FUCA1
IP6K3
RIPOR3
ITFG2
LSG1
TINAGL1
BRIX1
EVPLL
RNF40
CCDC189
MTHFD1L
NOXO1
MB
RPS5
EPS8
SART3
ISCU
TBL3
RPS2
RNF151
MRPS10
UGT1A6
TRIAP1
COX6A1
RTN4IP1
QRSL1
ZNF408
ARHGAP1
NFE2
USP31
PDC
MRPS35
VPS8
GTF3C5
SSNA1
ANAPC2
AAAS
TMEM178B
TTC31
CCDC142
ZFHX3
GRK7
CCNT1
CTNNA3
TRMO
ANKK1
PDLIM2
MRPS11
MRPL46
NIBAN2
DPP3
PHLDB2
PLA2G2A
SUSD1
PRR15
DDX46
PLEKHH2
NDUFB3
FAM126B
EXOSC5
BCKDHA
SPARCL1
SLC25A11
RNF167
PFN1
PAXBP1
CACTIN
ENO3
BNIP1
CLDN9
CLDN6
CIDEA
ZCCHC4
KDM2A
CEBPA
LAMA3
PHAX
ALDH7A1
DDX23
SLC24A1
INTS14
ZRANB2
BCAS1
METTL1
EEF1AKMT3
CYP27B1
TSC1
GFI1B
COLEC11
STK24
TCERG1
IQUB
FAM184A
INO80D
PIM1
TMPRSS11A
LDLR
ZSCAN25
PPL
NVL
CENPBD1
TNFRSF1A
CCND3
TAF8
CASP5
CATSPER2
PTPRF
SUPV3L1
KRR1
METTL27
CLDN4
SYT1
FOXO6
DUSP2
ASTL
METTL2B
MAPKAPK3
CISH
SERP2
MED1
NDUFA9
AKAP3
SREK1IP1
CWC27
MUC20
COPS3
MRPS15
ERAP1
PDE6D
COPS7B
SULT2B1
GINS1
WDSUB1
SLC27A5
ZBTB45
SYNCRIP
RWDD1
TGFBR2
APOBEC3H
TIMM22
GNG4
TRIM17
TRIM11
TBL2
TXN2
CCDC88B
PTPRH
XAB2
STXBP2
PCP2
HERC5
DNAJC19
NPAS2
ZMYND8
CALML5
DUSP6
NOP16
HIGD2A
NCOA3
TRMT12
LY6D
ADAMTS16
NUP214
CELA3B
DNAJC11
MNT
FLRT2
CELSR1
STYXL1
NDUFS3
KBTBD4
CNPY2
FAM180B
POU5F1
ZNF256
PTK2
RASEF
NR2F1
CYP26B1
C12orf43
METTL2A
SLC2A4RG
LIME1
ANXA1
STEAP3
BZW2
ANKMY2
VPS33A
HNF4A
SERP1
EIF2A
TUFT1
ZMPSTE24
TMCO2
PNKD
PARG
GFM1
PTP4A1
MFSD10
TRIM6-TRIM34
TRIM6
IL36B
MDGA1
ANP32A
CASC3
CEP162
TMCO6
NDUFA2
IK
AP5S1
TNFRSF10B
TNRC18
ATP5MG
GSN
MRPL21
IGHMBP2
ELAPOR2
LENG9
CDC42EP5
PLEKHA7
PRSS22
SAMD10
PRPF6
CCDC174
DIABLO
MAPKAPK5
RPTN
GGA1
RAB11FIP2
SLC12A4
RPS21
TLL2
ANO1
PPWD1
CENPK
MBD6
DDIT3
ABCB11
SLC26A11
SGSH
ALG1L
KYAT1
BMS1
UBE2L3
LRRC8A
APCDD1
HABP2
NAT1
DTX4
HEXB
NUP54
FRMD7
TACC1
MNAT1
D2HGDH
SLC5A1
ARID5B
UBQLN1
NDUFB5
MRPL47
VPS52
RPS18
B3GALT4
ALDOA
SLC25A51
CPVL
CHN2
NCAPH2
LMF2
CBLC
IL20
AP5Z1
RARG
SMG7
VGLL4
USP30
CRTC1
NUDCD3
SEC13
TPST2
C7orf65
RPEL1
ALAS1
GPBP1
PDCD6IP
HSPBP1
BRSK1
AGPAT2
AMOTL2
CCDC102B
NDRG1
MB21D2
MRM3
GLOD4
CDK12
PSMD1
HSPB1
LSM5
AVL9
C20orf85
GPN1
CCDC121
PPP4R1
KRT18
CCDC185
ARID3A
TMEM262
FEM1A
COMMD4
ZBTB38
LMNA
SH3GL3
TMEM69
GPBP1L1
FBXO32
PIKFYVE
PSRC1
ZNF260
ZFPL1
CDCA5
PHB2
TSEN34
RBX1
SRRD
HPS4
RPL23A
RAB34
PROCA1
FAM133B
TLCD1
NEK8
ZFP42
ZBTB20
PAN2
IL23A
PRKAR1A
ATAD2
TTC32
MINK1
SGMS2
MCC
PLEKHG6
GGCT
EXD2
ART1
EFHD2
IL1F10
PCBP2
HIVEP2
DOLPP1
VMO1
PSMB6
GLTPD2
EIF1AD
CST6
BANF1
PHF3
KLF3
MED4
ZBTB46
PGK2
KLHL13
LDHD
ERI1
RPS12
RBM42
ASH2L
GOSR1
METTL3
ORMDL3
GSDMB
LGALS8
ZNF497
A1BG
TMEM207
NAPRT
MROH6
FGD3
MRPL3
BAK1
SLC44A2
SOX4
UBE2Q1
CHRNB2
ARID2
TMEM270
ENPP3
MED23
RBM19
FANCD2
PRKAR2B
WDR75
AMN1
SMTN
FBXO11
PYDC5
IFI16
ASAP1
FSCN1
MAN2C1
OBSL1
ZNF17
MUC4
INHA
NUDT5
CDC123
KCNAB1
CCDC77
KDM5A
APOBEC4
ERG
RNASEH2C
KAT5
FZR1
DOHH
LRRC47
C6orf47
BAG6
APOM
DNAJB12
AAR2
TSR2
COPZ1
SDHC
MPZ
HCAR3
RDH5
ITGA7
BLOC1S1
ABLIM1
GPC1
MCM7
AP4M1
MCCC1
BBS1
JADE2
KDM3A
AGTPBP1
TLE3
AP3S2
LONP1
CATSPERD
RPL26L1
PIM3
DSTYK
DLC1
GID4
ATPAF2
FGF1
LNX1
POLD4
BCAR1
ZNF3
COPS6
ADAMTSL4
CEP63
ANAPC13
IPO11
DIMT1
ANK3
ARL14EPL
ANKRD22
XPNPEP3
ST13
DNAJB7
PSG4
NCBP2AS2
NCBP2
GLCCI1
KRT17
ALG10
PERM1
FAM153B
PAQR9
SENP2
TACSTD2
ARMC1
VIRMA
PSMA1
TMEM208
LRRC29
SH2B1
PDE3B
VARS2
GTF2H4
MIDEAS
KAT6A
MED20
BYSL
PIDD1
TRIM55
PIK3C2B
TPD52L2
ABHD16B
PHF12
CIPC
LZTS2
FBXW2
WDR83OS
WDR83
MAN2B1
PNPLA2
TRMT61B
RPLP2
C1QTNF6
RPSA
KRTAP5-6
METTL6
EAF1
CENPW
CCDC192