ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10045306 | LNCAP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◣ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

GET4
TSPAN31
MARCHF9
CDK4
UBE2Q1
CHRNB2
HEXA
AP5Z1
RNASEH2C
KAT5
SYNGAP1
PHF1
CUTA
WASHC2A
ILF3
RPUSD4
FAM118B
ATP6V0D1
AGRP
LAMP1
UVRAG
EFNA3
PIP4P1
OSGEP
APEX1
WASHC2C
MTHFR
CLCN6
GABARAP
PHF23
DVL2
ZNF358
MCOLN1
MFSD1
SLC35A5
ATG3
WDR62
THAP8
RAD9A
PPP1CA
ATP6V1G1
PNP
TMEM116
ERP29
HAGH
FAHD1
CLCN7
GBA
PRR5L
COMMD9
TPP1
TAF10
HPS5
GTF2H1
HOOK2
UBE2B
CDKL3
AFF4
SPNS1
LAT
TBC1D30
GNS
SPPL3
THRAP3
TRAPPC2L
GALNS
ARMCX5-GPRASP2
BHLHB9
GPRASP2
RNASEK
C17orf49
THOP1
SGTA
CLN3
APOBR
CIRBP
FAM174C
EFNA2
SPATA25
NEURL2
CTSA
ZSWIM1
COMMD8
ATP6V0C
AMDHD2
GTPBP6
HOXC13
PLA2G1B
SGO1
SLC33A1
ATP6V1C1
TRMO
HNRNPH2
DPH2
B4GALT2
ATP6V0B
UBAP2L
C1orf43
LAMTOR1
ANAPC15
KDM4C
SERINC4
SERF2
HYPK
CEP162
DUX4
GTF2A1
VPS33A
MTRNR2L1
SBNO2
KLHL12
RRAGB
STX4
BAX
CREBRF
NPTN
LZTFL1
DUS3L
PRR22
SPG21
ADNP2
SHPK
CTNS
RRAGC
RMND1
ARMT1
PLD3
C19orf47
UBN1
GLYR1
RPL35A
IQCG
LMLN
LAMA3
SLC38A7
PRDX6
FNIP1
VPS11
ZNF292
AVPI1
NAPA
ATAD3A
ALLC
CNP
CTDP1
ATP5IF1
PPFIBP2
SUPV3L1
SPATC1L
WDR24
FBXL16
SUMF1
PRPSAP2
RDH5
ITGA7
BLOC1S1
TBRG4
BCL2L13
ATP6V1E1
NAGPA
TOP3A
SMCR8
TMEM248
RGS20
ATP6V1H
SLC35B2
HSP90AB1
NFKBIE
FRG2C
C5orf51
RPL5
HNRNPA2B1
CBX3
ZNF507
WBP2
TIMM22
OSGIN1
TOGARAM1
KLHL28
LSM12
G6PC3
NUF2
RAP2A
DNAJC13
TSSC4
MYDGF
YJU2
CALML5
CCDC174
ATXN3
MORC2
POLR3B
DNPEP
PIK3R3
UBAP2
MARCHF8
ARFGEF2
CCDC59
ARID3A
PRMT3
NOL8
CENPP
NME1-NME2
NME1
COMMD4
NDST2
DPP9
ATP5MC2
GNB2
WASHC5
NSMCE2
CACYBP
NR1D1
NUP214
FAM187A
EFTUD2
CCDC103
KHDRBS1
VCPIP1
C8orf44-SGK3
SNAPC1
GNAT1
STX6
ATP6V0E1
PHYKPL
TMEM258
FEN1
EIF2S1
ATP6V1D
POLG
USPL1
HMGB1
ANKRD12
SCAMP3
FAM189B
SLC49A4
HSPBAP1
NOXO1
TBL3
RPS2
RNF151
TESK2
MMACHC
CCDC163
SF3A3
NDUFS7
ADCK1
CRYAA2
CRYAA
SRA1
SLC35A4
APBB3
CPEB4
FHL3
UTP11
NEU1
PSMC4
TOR1AIP2
TOR1AIP1
PBRM1
GNL3
TMEM259
CNN2
ARRDC4
ITFG2
EEF1A1
ELP5
CTDNEP1
FRMPD1
FEM1A
SLC36A1
THNSL1
SOD2
WTAP
UROS
BCCIP
EMC2
MRPL24
HDGF
RPS27
RAB13
MSL2
NUDCD3
SCYL3
MRPL48
MRPL27
EME1
PDE12
LRFN3
QTRT1
ZSCAN22
MYL12A
UBE2J2
LEMD3
CACUL1
ATG4C
KANSL2
SHC1
CKS1B
CYCS
FLAD1
MIS18BP1
RPL27
IFI35
RPEL1
CCDC200
S100A13
S100A1
CHTOP
TOM1
PTBP1
ZNF56
AP3S2
ANKHD1-EIF4EBP3
ANKHD1
RFESD
TIPARP
CCNL1
TNRC18
LOC100129484
CDIP1
CCNT1
VPS26A
LRRC56
HRAS
CCNYL1
RBBP5
LAMTOR5
CRNKL1
CFAP61
CEP350
LTBP2
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
NUFIP2
MED11
CHMP7
ZMYND15
CXCL16
ZZZ3
SNRPE
LONP1
CATSPERD
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
SARS2
MRPS12
TSNAX
CREBL2
MRPL3
FLT4
SNRPA
C19orf54
MRPS23
BORCS7
RGP1
MSMP
GBA2
MRPL55
PARL
ZNF687
TRAPPC8
DUS2
DPEP2NB
DDX28
GTF2H2C
GTF2H2
SOD3
ARID3B
CASC3
LOC102724770
DGCR6
MTF2
STAT3
THAP5
DNAJB9
ITGB3BP
EFCAB7
NAA38
CHD3
PARP1
PAXBP1
GABPB2
THOC3
MLLT11
PEX14
DFFA
CORO7-PAM16
CORO7
ZMPSTE24
TMCO2
DNAJA3
MVK
RABL3
PIK3C2A
GTF2E1
ATAD2
SRP9
CAND1
SF3B5
MTRNR2L8
B3GALNT2
ZBTB6
RC3H2
SECISBP2
CKS2
ACAD9
SLBP
TMEM129
TACC3
RBM6
MON1A
CFAP251
MBD1
CXXC1
HMX2
BUB3
RPS26
CSTF2T
N6AMT1
SIKE1
RNMT
FAM210A
GTF3C4
DDX31
RNF43
LSR
SMG5
LMOD1
GTF2H2C_2
SRSF3
TIMM17A
ZNF672
FITM2
VHLL
GLMP
ART1
PDAP1
BUD31
JMJD1C
HACD2
C8orf37
GID4
ATPAF2
DUSP12
SRSF1
SAMD10
PRPF6
CPT1A
IFT43
TGFB3
CSNK1G3
CDK7
TNPO2
MIA3
CTSL
INTS7
DTL
DHDDS
MLEC
TM9SF4
HACL1
BTD
BUB1B
TMEM167B
DNAJC25-GNG10
DNAJC25
MTIF3
CCDC124
ZBTB40
LTA4H
PPRC1
TCP11L1
PHRF1
SLC25A53
FAM199X
CACTIN
TDG
C12orf73
FDXACB1
C11orf1
ALG9
GDAP1
PDXK
ARHGEF7
HDGFL2
BCLAF1
SKAP2
GORAB
ZNF140
IFT57
U2SURP
CSTF1
AURKA
C12orf66
CEP63
ANAPC13
MTFR2
GABPA
ATP5PF
LDLRAD4
FZR1
DOHH
ATG5
SLC25A32
DCAF13
NSG2
NUP153
VPS50
HEPACAM2
HSPA5
SEC11A
ASH1L
ZNF850
C11orf65
HPS1
GFM1
CLSTN1
KIF15
KIAA1143
RORC
C2CD4D
USP30
THAP6
BCAR3
PIDD1
CD164
PNPLA2
GSTA4
NAT10
RPLP2
ERRFI1
ZNF565
ZNF146
SELENOH
GDF15
FNTB
GPD1
COX14
SGF29
NCL
HNRNPC
DENND11
AURKAIP1
RPL38
TTYH2
DRG1
ASNS
NUP107
RPL22L1
CORO1A
EPRS1
TMEM170A
ZNF408
ARHGAP1
BANP
PPP4R3A
OXSR1
NPM1
ARMC5
KEAP1
DCAF8
DOP1B
COPS7A
HDAC6
ZFYVE26
RAD51B
RPS29
GRN
SLC34A1
EXO1
HDAC2
PFN3
WWOX
TRUB2
COQ4
RNF224
SLC34A3
PCNX4
AHCYL1
RNF208
CYSRT1
ZFYVE19
DNAJC17
ORC2
L3HYPDH
JKAMP
AKAP9
BMS1
KCNIP2
TMBIM6
ADAT1
NOL7
ZNF714
CFAP43
WDR55
DND1
SV2A
TTC14
GPHN
ZNF682
BOLA1
AAAS
CUL5
UTP23
TAMM41
DNMT1
WDR13
PRC1
RAB18
DAZAP2
SF3A2
PLEKHJ1
CARM1
DENND4A
TBC1D32
LUC7L2
FMC1-LUC7L2
FMC1
MRPS21
RPS11
LPCAT3
EIF1AD
CST6
BANF1
RPL13A
CHD1
EHMT1
HSPA9
WDR89
ARRDC1
RIOK3
DNM2
RPS14
RPL37
CARD6
PRRG2
EXOSC3
IQCH
AAGAB
CZIB
PSMC5
FTSJ3
NOSIP
SLC3A2
NTMT1
C9orf50
WDR4
MZF1
KTI12
HOXB8
HOXB7
GOLGB1
PRKCSH
CCDC151
MRPS18B
ATAT1
YY1AP1
HOXB6
DAP3
TRIP4
PCLAF
SRCAP
LOC730183
PRKCI
SASH1
BCL9
IPO13
UBE4A
TOMM20
CIART
C1orf54
PLEC
GTPBP4
KHSRP
MLKL
SMARCAL1
SEC11C
EAPP
STOML2
PIGO
CCT2
RTTN
TTBK2
SMIM15
FAM167A
C5orf49
ERBB2
POLR2J3
C6orf47
BAG6
APOM
SIRT4
PDCD11
ATP5MD
ITGB1
IP6K1
CACNA1S
ASCL5
UTP3
KMT5C
ZNF77
SETD3
CCNK
DYRK1B
TBC1D22A
CDC34
C10orf88
PSMD9
HPD
TAF13
MFSD4B
ADAM2
SLC23A3
RETREG2
CNPPD1
GZMM
SCAF11
TAF12
GUK1
POC1B-GALNT4
GALNT4
GJC2
ESCO1
WDR5B
ZMYND10
TMEM115
RASSF1
NPRL2
CYB561D2
TFPT
PRPF31
PSME3
BECN1
USP28
SYS1
KIFC1
ZSCAN32
ZNF174
PPT1
PDCD6
NUGGC
ELP3
IPO11
DIMT1
ZAR1L
BRCA2
SHOX2
RSRC1
PPP2R1A
PCNX3
MAP3K11
ESD
RBM48
PEX1
PDGFB
C19orf48
IFRD1
TPM3
TPCN1
PRCC
TOMM70
LNP1
PARP2
CCNB1IP1
ZNF219
TMEM253
IGIP
CEBPD
SMIM10L1
PRH1-TAS2R14
C17orf97
TMEM80
DEAF1
STX16
JUP
CBWD5
AK2
STT3B
EIF1
TM2D1
ANAPC10
ABCE1
GLRX5
ZNF165
OR1F12
RAD51AP1
C12orf4
ZNF497
A1BG
DCP1A
TMF1
RPS13
SLC25A46
SEC23B
CDK20
BLOC1S6
AADAT
SLC35B1
SSBP1
DSTYK
H2AZ2
VMAC
NDUFA11
USP54
THG1L
RB1CC1
PKLR
FDPS
RPS3
LGALS8
ACSS1
CWC25
TOM1L2
DRC3
RNPS1
MRPS31
CFAP20
RBMXL1
KYAT3
INTS9
HMBOX1
PNPLA6
SEPTIN2
HDLBP
CLN6
RTP3
LTF
FAM43A
SLC38A5
OSBPL8
FTSJ1
EIF4G2
RRP15
MRPL21
IGHMBP2
ULK4
MRPS33
MCCC1
PRKCD
SP2
FUS
IFT172
GCKR
FNDC4
NUDT15
GINS3
DDX21
ZBTB3
POLR2G
SLC12A6
EIF4A3
NUTM1
NOP10
TCAIM
L2HGDH
DMAC2L
SLC39A10
FRG2
LZTR1
KMT2E
FAM227B
DTWD1
POT1
COL6A2
ZNF622
ZSWIM3
ACOT8
HTR5A
KCNJ9
NCBP2AS2
NCBP2
COPS4
TRAPPC9
SRSF11
WDR36
CSDE1
PRORP
PPP2R3C
FAM53C
CDC25C
PSMD6
NFX1
ARF4
TADA1
ACBD6
COA6
SLC30A5
PCCB
TRAF6
RAG1
NAA25
IFIT1B
STK19
LOC110384692
DXO
C4B_2
C4B
C4A
LOC389831
HMGCR
MYO1G
POLR3G
MBLAC2
ANKRD46
PSMD3
SMN2
SMN1
PMVK
ARL4A
POLR1B
SACM1L
CTH
ZMYND12
PPCS
CCDC30
ZSCAN25
GOSR2
GNL2
PLIN1
PEX11A
QTRT2
CCDC191
PRPF38B
WDR93
RALBP1
VCP
FANCG
SLC25A13
RBM4
EIF4A1
CD68
SLC27A5
ZBTB45
CIPC
TMEM87A
GANC
SLC25A26
NEDD4L
ZFPM1
RAB5A
EFHB
SRPRB
OGA
ZNF513
SNX17
EIF2B4
PDCD6IP
UMAD1
ICE2
SRSF7
ZNF561
DDX19A
RAB30
MPZL1
TRAPPC12
EIPR1
MBD4
IFT122
MTNR1A
ATF7-NPFF
ATF7
SLC39A6
MRRF
KRTAP5-7
SMIM20
RBM18
KRTAP12-3
KRTAP12-2
FOLR1
DCTN4
ACSL1
SKA3
MRPL57
ARIH1
TAF9
RAD17
AK6
GTPBP10
WDR76
MFAP1
SLC23A1
TRA2B
RGS3
PRRT2
MAZ
PAGR1
THOC1
RRN3
CCDC116
AATF