ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2140209 | MM.1S
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◣ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

UBE3C
SH3GL1
CHAF1A
SUMO3
ANKS6
ADGRB3
DAZAP1
GAMT
SHLD2
GLUD1
PTBP1
MEF2C
SLK
SUMO2
ALG6
HM13
SCAMP5
OTUD7A
MIER1
DNAI4
SUSD4
ADAM23
SMARCA4
SLC4A2
CDK5
ARHGAP32
FGGY
STAU2
RALGDS
MRFAP1L1
BLOC1S4
MYCL
ACVR1B
SBK1
NSD1
NPEPPS
AP2A2
PTPN6
C12orf57
ATN1
CLSTN1
RABGAP1L
TFDP1
GRHL1
FLYWCH1
CBX7
SAP30
PRKCA
UBE2E2
SFXN1
FASN
KDELR1
GRIN2D
PPP5D1
CALM3
NR5A2
SPTAN1
KDM7A
TM2D2
ADAM9
CHD7
PLEKHF2
C17orf58
CACNA2D2
PHF21A
ACTN4
PATZ1
CFAP206
DIP2A
ST7
DTNB
IGF1R
USF2
CUTC
COX15
PRKCE
MRPL45
CHIC2
ATXN7L3
CROCC
PCIF1
ADCY9
UBXN2A
LASP1
FCHSD2
IKZF2
CABIN1
NFASC
IRF2BP2
EFNA3
LYPLA1
FBXL3
OAZ1
PEAK1
HMG20A
SLC25A11
RNF167
PFN1
GP1BA
UPF1
BSG
CTBP1
LCOR
MELK
GAB2
CBX6
PTBP3
SKIDA1
MLLT10
SKIL
MRFAP1
PHIP
USP28
EIF4H
IFT140
CRAMP1
PKNOX1
PTP4A3
SCYL3
AUTS2
PTPRG
LIFR
GNB1
FBXL22
SPRTN
EXOC8
STAT5B
RYK
PARD6B
ZBTB14
SMURF1
ARPC2
LYPLAL1
ATOH7
FEZ1
TMEM266
FBXL5
RABEP1
P4HB
ATG9A
ANKZF1
RALGPS2
NF2
HHAT
NOXO1
SYNGR3
GFER
PRMT3
AMMECR1
C3orf70
SNX19
ARRDC3
BTBD3
OGFR
AVEN
NEK6
SLC6A6
PRRT2
MAZ
PAGR1
TCTA
RHOA
UBAP2L
C1orf43
EXOC6
SNX12
SIAH1
CCDC88A
PAPSS1
TSPAN7
THAP12
GVQW3
ZNF217
ZC3H7A
FZR1
DOHH
PPP2R3B
ZNF787
UBE2E3
HP1BP3
PTPRF
YEATS2
NSD2
APBB1
MAPK8IP1
SGPL1
WWP1
PXN
CPEB2
TAOK1
ABCA5
LARP1
MAST2
LGALSL
RBM14-RBM4
RBM14
MKLN1
SINHCAF
SRCIN1
PPARGC1A
GPAT4
RBKS
BABAM2
MINDY2
FZD3
FBXO16
PWP2
LOC102724159
GNA13
LRRC20
SRSF6
UBTF
KLF16
KANK3
HSP90AA1
NDUFA4
TP53BP2
MCM9
SPEN
DLL3
DENND1A
C10orf95
LUC7L2
SYNCRIP
FMC1-LUC7L2
FMC1
MTMR3
CTNNA2
RNF152
OSTF1
NMRK1
PDIK1L
SPCS3
THUMPD2
MAP3K2
THOP1
SGTA
DLGAP4
SSBP4
RUFY1
VOPP1
GNB4
ASPH
MAP4K3
ACACA
TADA2A
RXRA
DHX15
TCHH
TRMT2A
RANBP1
DENND2B
TMCC1
PRR7
MPP6
LARP4B
FAM81A
ENTPD4
PSMA1
PDE3B
PDS5B
AMOTL1
PPP4R2
NELFCD
EPC1
DCK
LIMA1
SMARCB1
MAPT
PPAN-P2RY11
PPAN
ANGPTL6
NCOA5
SHFL
MAP4K1
EIF3K
HNRNPU
REST
CDKL5
FAM168B
CAPZA2
PPP2R5A
SUZ12
FAXDC2
CNOT8
NEO1
RAB6A
C15orf61
ATP2B1
LPIN2
PAIP2
CHD1
SPAST
MYO1D
PXT1
KCTD20
SRSF4
SFR1
CRTC1
TARBP1
NEURL1
SCAMP4
ADAT3
SLX4
PPM1A
PTAR1
HIF1A
NFRKB
UBXN4
THAP1
BRF1
PACS2
IKBIP
APOC3
APOA1
APAF1
SPATS2
QRICH1
SSH1
DPH2
B4GALT2
ATP6V0B
INCA1
CAMTA2
RNF170
KIF1C
HOOK3
RRP1
PCID2
CUL4A
GTF2I
ROCK2
WDR45B
PPP6R2
C12orf66
ZNF236
KIF5C
MPP5
KDM2A
IFI44L
PURA
ASXL2
PTK2
ADARB1
CHEK1
OPN3
CHML
CBLN1
RARG
TEX46
KDM1A
THEM4
ANKRD26
ATF3
SF3B1
LHFPL1
RGPD2
RGPD1
PTPN12
EFNA4
LMNB1
KLHL8
DGKZ
CDON
C9orf40
SPDYE16
BRD4
RNF187
STRN4
FKRP
EPC2
SNORC
POLA2
MDM2
SLURP1
XRCC5
ATXN7L2
CYB561D1
NR3C2
UBE2Q2
BTBD9
MXI1
CDC73
NEDD4
FKBP1A
ARHGEF12
PTMA
CD47
ZNF318
C2
ZBTB12
EHMT2
GRAMD4
ZSWIM5
HPS6
ARMH3
CLP1
BRD3
ZDHHC5
ST8SIA1
MRPS7
MIF4GD
GGA3
RNF44
CDHR2
COX20
ZZZ3
ZNF205
UGCG
DISC1
ZSCAN10
AMIGO1
TAFA5
RAB10
CHRNA7
ARHGAP28
SRSF11
LRRC40
CIC
ZNF185
BTG3
POLE4
SPTBN4
LCORL
DIPK2A
MTRNR2L8
FOXO3
TPBGL
TSC22D1
BCL2L1
WDR87
SIPA1L3
CNKSR2
GPATCH8
TBL2
LBR
GMEB2
METTL9
MADD
LLGL1
FBXL16
METRN
KMT2C
CUL5
SREK1
KLHL24
PHC2
TPM1
FAM189A1
AKAP1
USP6NL
NAPEPLD
BSN
ADM
HSF1
BOP1
SYNGR1
PDS5A
COMMD3-BMI1
COMMD3
BMI1
TANC2
COPG2
RGS19
OPRL1
LKAAEAR1
MATR3
ZNF652
MAK16
DRAM2
CEPT1
DENND5B
YTHDF2
RAD23A
CALR
HECTD2
ABHD15
TP53I13
ZNF821
TMEM145
ETNPPL
AGTPBP1
BTBD1
DUSP14
DNAJC5
TACC1
UBL4A
SLC10A3
LAGE3
ZBTB8OS
RBBP4
SLC25A12
HNRNPA2B1
CBX3
C2CD5
TM7SF3
MED21
MAPK3
GDPD3
YPEL1
MCUR1
FBXL17
SOX12
ZFP1
HSPA1L
HSPA1A
HSPA1B
PPP1R36
HSPA2
EBAG9
LRIG3
ACSL4
ATG16L2
ADI1
PLEKHA5
CCDC171
KLF13
MEX3B
KLHL32
TMEM39B
PPP1R3E
BCL2L2-PABPN1
BCL2L2
TMEM201
RNF144A
TOB1
HK1
DBNL
GRK3
VEZT
FGD6
PELP1
ARRB2
PRKAB2
CHD1L
PYCR3
GFUS
C5orf24
CSGALNACT2
COP1
VHL
PIDD1
SLC25A22
CEND1
N6AMT1
INSR
MTRNR2L2
MSH3
DHFR
SRCAP
LOC730183
RCAN3
TMEM170B
MINK1
LTBP4
RNPEPL1
DUSP28
ANKMY1
VDAC3
SNX10
BMPR1A
LYPLA2
GALE
SFMBT1
USP31
PPP1R35
ZCWPW1
MEPCE
TIGD2
PPP1R2
UBXN2B
LAMC1
ANKDD1A
BCL7B
SMAD2
PAXIP1
LRBA
KIAA1549
TUBD1
RPS6KB1
SFXN4
CCNF
RYBP
BRD2
JMY
SAYSD1
CHAMP1
AFDN
EVL
UHRF1BP1
TRPM7
CLN5
MTSS1
GSKIP
ATG2B
ADRA1A
RALB
KBTBD2
CDC34
CAPRIN1
DYNC2H1
FBXO30
PBRM1
GNL3
BARX2
PUM1
MTCL1
MYL5
ATP5ME
PIK3CB
UTP23
SUGP2
ARMC6
PPM1E
FANCC
ARHGAP5
RASA1
RNFT1
INTS7
DTL
VAPA
BAG3
DBN1
AGO2
AGO4
MYO6
TRIB1
NLRP3
CD99L2
PTCH1
CAMKK2
CRY1
LRFN3
STS
PUDP
FSTL4
ANP32E
LEF1
PTPRK
FAM124A
MLH3
CDK13
SYT11
NDUFAF3
GON4L
DALRD3
JMJD1C
ZNF516
REEP3
PODXL2
NFATC3
RANBP3
TXN
TMEM18
EHMT1
ARSG
SLC16A6
ZNF740
CSAD
DYRK2
RIMKLB
PPP3CC
FLOT2
DHRS13
ZBTB46
SF1
STK32C
LRRC27
ADAM22
GDI1
FAM50A
CLK4
ATP6AP1
ATP11A
NDUFV2
STAG1
TEX264
VGLL4
CDC20B
TAF12
EMILIN2
HAGHL
CCDC78
ANTKMT
GNL2
MAML3
DPF2
MSL3
TMEM191B
FOXN3
INTS13
FGFR1OP2
GCFC2
PGPEP1
TOLLIP
RAP1A
JOSD1
GTPBP1
CDKN1C
SCN8A
MAP2K7
ENO3
CCAR1
MECP2
MAP4
HNRNPA3
TAX1BP3
PRR30
PREB
EMC6
BCLAF1
MXRA8
DVL1
NFKB2
CAMLG
RASAL2
G3BP1
RFC2
SPDYE7P
POM121
NKIRAS1
NR1D2
LONRF1
PTPN14
PRKAR2A
UBE2D3
AATF
PREX1
DUSP8
ASCC1
ANAPC16
TLE5
OSBP2
PRMT2
TRIM33
POLR2J3
ANXA4
AAK1
SMARCC1
COQ10A
ANKRD52
MYRIP
IGFBP3
FAM177B
GAREM2
MRPL54
APBA3
RAX2
ZNF865
ZNF524
FIZ1
LOC388282
KIFC3
ARF1
RAB3IP
CSNK1E
CTSC
TBC1D14
DPT
DUX4
EPS8
PHF12
KHSRP
RPP25L
DCTN3
DAG1
STXBP1
MISP3
GNAO1
AIG1
YBEY
MCM3AP
CLK1
PDXP
UQCR11
HSPA9
NTRK2
MTRNR2L9
THEM6
CELF2
DGCR8
CCDC34
SNX30
DSN1
TTLL6
MTRNR2L1
IFNAR1
KIAA0895L
EXOC3L1
E2F4
RUNX1
NOL3
FOXP1
B3GAT2
UBAC1
MEIS2
RBM33
ABCF3
PDZD8
H3-3A
MGA
POU2F1
H6PD
FAM151B
CBFA2T2
SLC9A5
PLA2G12A
FHOD1
MRPL53
MOGS
AP2S1
FUT8
ARHGAP35
ANKRD29
MIS18A
YY1
GPR160
GRIP1
ARHGAP17
USP1
DOCK5
ATXN2L
F11R
ARID3B
ACTR5
ABCA3
NUP50
MAT2A
CCL5
TMEM139
NIBAN3
CASP2
RGS3
XPOT
SAFB2
SAFB
FAM53B
SNAP47
JMJD4
ZNF639
DPYSL2
KDM4C
MNT
PSMG3
PACS1
SLC35F6
WDR1
STAMBPL1
GPR37
UNC93B1
ALDH3B1
CENPV
CANX
ANAPC4
ACTA2
SDHAF3
KLF1
GCDH
DNASE2
PHYKPL
UVSSA
FN3K
GAA
RPL3
RRAGD
TRAF3
PKMYT1
MRPL55
RPS15
MRS2
DYNLL2
CDK5R1
SORBS2
TBC1D12
KCNA3
CAMSAP1
SEMA3C
TBCCD1
DNAJB11
SRI
CHST12
TFAP2A
PDCL3
SMAD4
TMEM17
FGF7
FAM98A
DIXDC1
MPPE1
DOT1L
SDHA
CCDC127
RNF32
FBXO41
EGR4
SERINC2
NPRL3
SPHK1
ZNF575
ETHE1
MBTPS1
JADE1
ARHGAP33
AP3S1
PTDSS2
ANO9
PITPNB
TXNDC15
SMYD3
OR5P2
DGKG
PRKACB
C7orf25
IFNGR2
BCL11A
ACSL1
PIK3R2
CRELD2
ALG12
BCL2L13
POR
TRAPPC9
TMEM250
SENP2
MCMBP
C11orf80
C6orf47
BAG6
APOM
RNF145
GPI
SMC5
LUC7L
FAM234A
KANK1
HNRNPA0
POFUT2
HSPA8
ZSWIM6
SLC20A1
SMCHD1
BRWD1
RAP1GDS1
SAMHD1
DCTD
THOC1
RINT1
PUS7
CRB1
ZAR1
ABCD3
CSNK1G2
PRKAG2
IFIT1
ETAA1
NCKAP5L
LRP8
SPPL2B
LSM7
HCN3
CLK2
AP1S2
SLC2A4RG
LIME1
ZNF41
TBCD
RGL1
ARPC5
ECE1
THOC3
DRG1
RAB35
GTDC1
SENP8
MYO9A
ZBTB10
SEC24D
GNAQ
TIPARP
DGLUCY
RPS6KA5
ZDHHC18
MAP3K14
MKNK2
UBE2V2
PRELID3B
OR8D2
CD1A
LRFN4
SMIM11B
SMIM11A
TBC1D5
ATRN
TMEM191C
PPARA
AFF3
ZNF3
COPS6
TAF4
PRKX