ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX059714 | VCaP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◣ SRX059714: VCaP

◢ HDAC3: STRING

PRICKLE1
RAE1
MTRNR2L3
HERC3
PYURF
PIGY
GHRHR
PMF1-BGLAP
PMF1
ARHGEF7
FBXO46
MEIOSIN
NBPF6
ARID3B
SCGB3A1
APP
KDR
DUX4
TACC2
SLC45A4
ZBTB7B
LENEP
SLC2A10
PMM1
ATAD2
DNPEP
KANK1
SLA
ETV4
RTF1
TM2D2
ADAM9
ASIC2
CALML5
PIK3AP1
TENT2
OTULINL
PROP1
LECT2
PEX10
MTFP1
SGK1
LGALS8
NUDT3
NBPF4
TMEM216
NOS2
FRMPD1
SLC38A1
LAMA3
PTTG2
APBB2
CDH4
SLC22A10
ACMSD
GALNT18
NGB
GRM3
APOLD1
MCF2L
CXCL8
SBSPON
CDK14
TMEM40
JPH4
NPR2
TIPARP
RUVBL1
EEFSEC
C6orf58
TRIM52
C1QTNF3
PPARGC1A
ANGPT1
SLC1A2
IL24
C19orf12
MESP1
STEAP4
SGK3
HIGD1C
HERPUD2
ARSG
ACSL3
SLC16A6
BCL2L13
ATP6V1E1
LDB3
ELMO2
MRGPRD
ARNTL
IFRD1
LOC102724770
DGCR6
BEST3
SMYD1
KRCC1
MRPL24
HDGF
NWD1
IRX4
HIF3A
ZFAT
KLF9
UGT2B10
VEGFB
DNAJC4
MAX
SAXO2
EFL1
TRPT1
NUDT22
ULK4
TCAF2
MAMDC2
ERN1
SLC35F6
PARK7
CDCA7L
OXGR1
DAAM1
SCUBE3
KRT4
PCDH7
RFPL3
PDE9A
SKIDA1
ETV5
UNC45B
NLE1
ATOH8
ADAMTSL3
SRSF10
SASH1
HAPLN2
AKR1B1
TMEM14A
PROCR
NLRP5
GLYATL1
ZNF610
ANP32E
SUPT7L
SLC4A1AP
MX1
RTL1
RHOT2
JPH3
STC1
MDGA2
TMEM63A
LEFTY1
EPHA5
RAB37
SC5D
DHRS3
TNK2
PPP1R15B
EYA3
EXPH5
NFIC
AFTPH
RIMBP2
SCIMP
CDKN2AIP
MTRNR2L1
CREB3L2
ERCC1
MTCL1
RRBP1
AKAP12
BANF2
IER5
SMIM34A
ADRA2C
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
ATP6V1G1
FNIP2
ITGB5
SLC16A8
TUBA3D
DHX36
DUSP6
UNC13A
VSTM5
MKLN1
ZBTB18
CCDC9
PPDPFL
PRRT1
PPT2
COLCA2
IRS2
ISX
ANKRD40CL
TMEM204
OR4F15
DDX19B
AARS1
EAPP
NBPF1
ATXN2L
KMT5A
DIDO1
WDPCP
TMEM268
SPIDR
FHL2
LGALS7B
IFT43
TGFB3
FAM25A
SULT1C3
TIMP2
TMEM100
FAM234B
PXDN
CLDN8
FKBPL
ATF6B
RBX1
MSX1
IL10RB
CAPN5
STXBP6
ZNF511
TUBGCP2
CBX4
CCKBR
POLR2J3
WDR74
STX5
KCNQ3
NOVA2
ARHGAP22
PIGZ
IQANK1
FAM83H
FAF1
NPTX2
MAPK15
KLK3
KIF5C
DPP9
UGT2B28
ARHGEF38
DNAH12
BHLHE40
GABRA2
MBOAT2
LOC388282
TLK1
KRT3
ZNF771
LRRC69
RFNG
GPS1
DUS1L
TMCC2
COL28A1
TMEM62
PTPRR
TRMT12
CYP3A43
MUSK
MAT2A
RGL3
IRGM
TEPSIN
NDUFAF8
BDNF
SRP9
MMP28
ADAMTS8
FAM3C
FMN2
TMEM237
SLC29A2
PDXK
EIF4EBP1
RPH3AL
IGFBP1
ANK3
SOX8
ZCCHC14
ST6GAL1
HDGFL2
MMP17
MTRNR2L2
MSH3
DHFR
PHLDB2
MAPKAPK3
CISH
PALLD
OR13G1
RPS27A
CLHC1
FAM25G
FAM25C
BIRC5
TUBA3E
TRIM49D2
TRIM49D1
MKS1
TES
SEC13
SH2D6
CAPG
SAMD3
ETF1
TBC1D30
GNS
ZNF559-ZNF177
ZNF559
PDGFA
NUDT16
CHCHD5
TMEM262
DAB1
IL20RA
SLC30A4
ITPRID1
TFCP2L1
DLX1
LSM11
CCDC9B
DISP2
UGT2B11
PHGR1
SEPTIN9
IFNLR1
LINC01638
ALDH3B2
PPP1R14B
LOC114841035
FKBP2
HES6
PLPBP
ZNF331
SLC19A1
KCTD7
CBY3
TSPAN9
EFCAB12
CENPS-CORT
CENPS
TSPAN3
MTMR9
TPT1
PRDM1
LBHD2
HMGN4
SYK
ASPHD2
GPX3
SBSN
GAPDHS
CLIC6
TAOK3
ZNF385B
CDC7
DECR1
CLIP1
MACROD1
SMIM13
PFKFB3
EDEM1
PHF19
DMRTA1
MTRNR2L8
FAM222B
LAPTM4B
PRRC2B
UQCC2
SLC2A5
FBXL20
AFAP1
STK32A
TTC3
FNDC10
TASOR
PIGP
SIN3B
PTPRN2
NEBL
SCGN
TM7SF2
KSR1
ATXN7L2
VAT1
RND2
NFIX
ANPEP
MILR1
TPD52
CMTR2
SLAIN1
SENP1
PFKM
CDRT4
ST3GAL4
NFIB
NR2F6
OCEL1
STAU2
EHMT1
ARRDC1
SEC14L1
ATF5
PARP11
CCM2L
CREB3L1
WIZ
SCAMP2
DLG2
ACADL
LIX1L
CYB5B
NUDT9
MTFMT
POLR3GL
ANKRD34A
ZNF341
LOC100130520
CD300H
CDKN1A
CD93
ZNF516
SNX16
RGS12
TRMT11
ABCB5
TUT1
WASHC3
EDN3
KLF13
C3orf14
TTLL12
CPLX1
NSMAF
HES2
C4orf51
KCNJ15
CCDC34
HIVEP1
PHACTR4
PRR15L
TTC7A
MCFD2
CYB5A
C1orf116
PYCR2
SYBU
SMYD3
PRKCD
ATP5MC1
UBE2Z
PAX6
SCIN
INPP5K
GNAL
TRAF3IP2
CCN5
NME4
USP44
IMPG2
DECR2
MUC3A
PRKAG2
USP30
HMOX1
WRNIP1
MYLK4
PARP1
DPRX
ADAMTS5
ZNF287
TSPYL4
PDK4
LMOD3
KRTAP19-7
DSE
SLC27A5
AGPS
LDLRAD4
TMPRSS11F
CACNA1D
KIAA1522
SHF
SAMD12
PRELID2
C3orf20
ESRP2
HUS1
NIBAN2
TRIQK
SPDEF
HGD
HEG1
FAM25E
RNF186
UNC80
ART1
SHLD2
GLUD1
TMEM266
BRD2
MYH10
DCAF6
TFEB
SRRM4
HSPA4
ZNF813
PEBP1
MOCS1
PLIN1
PEX11A
ZNF589
CAMP
GSTP1
C1orf198
TLE1
RNF103
RGS7BP
SPHK2
MRPL44
DBP
BCAT2
FECH
WDFY1
MOGAT2
SOCS2
CYRIB
REG1A
ZNF547
TRAPPC2B
TBC1D14
MTNR1A
NEK10
PRMT8
KRTAP19-6
INIP
IL19
SLC26A3
VAMP2
PER1
UTRN
PRIM1
HSD17B6
RAB4A
NLRP8
ITGA8
DUOXA1
DUOX1
DESI2
COPRS
RGPD2
RGPD1
SLC50A1
EFNA1
DPM3
HSPA12A
ENO4
FKBP5
LAMP3
MNS1
HOXC6
HOXC5
FXYD2
DSCAML1
RSPH14
RAB36
LRRC30
CDK3
MRFAP1
ANXA1
ADGRG7
LRIG1
PRDM14
PSMB4
GSPT1
THRSP
CAP1
TAS2R42
NR2F2
EDARADD
JRK
PSCA
BLNK
AUTS2
B4GALNT3
SLC22A4
MTUS2
SNAI1
TMEM61
GPR153
ZNF614
ADRA1B
POLR2J2
CITED4
ABHD2
USP48
DAPL1
HPX
FCAR
DNAH5
VPS37C
G3BP2
CYP4F8
BCL6
BBS1
RNF148
RNF133
RERE
ANKRD28
SPATA6L
PLPP6
TBC1D3L
TBC1D3H
TBC1D3G
RUNDC1
PTGES3L-AARSD1
PTGES3L
RGMB
PIH1D2
NKAPD1
GDF15
RTN3
ATL3
CYREN
WTIP
RYR3
ECE1
LEKR1
TMEM42
TGM4
PPP2R2B
GPT2
THAP4
PAH
EMC4
RPL22L1
SPRY1
RTN1
KATNBL1
PITPNA
SHH
SOD3
LRRC32
CD177
TRIM68
SDHAF2
CPSF7
TNS3
STX16
FAM107A
FZD1
UBE4A
RASSF8
DCLK1
SORBS2
PSMD14
SYN3
MSMB
GLI2
RASAL2
PDE4D
PGAP6
KCNS3
BCL2L1
RAB11FIP1
SPTBN1
NR1I2
KLF15
TXNRD1
HYLS1
PUS3
CAMK1
GRHL2
KCNH2
BAZ1B
XKR9
LACTB2
FRG2
NFKBIA
TAF12
CLDN5
RHOH
THSD4
WFDC12
REP15
LYPLA2
PITHD1
MAL2
CAPN7
PAPSS1
MTOR
CEBPD
TRMT61A
CKB
AKAP7
TSC2
NTHL1
SLC9A3R2
DRG2
NFKBIL1
DDX39B
ATP6V1G2
CYTH1
HDAC4
TGIF1
SIRT4
FAM214A
PLAAT3
KCNIP1
NME1-NME2
NME1
CFAP74
FAM174B
SBF2
GATM
DNAAF2
FLOT2
DHRS13
ZG16B
BCAR3
TMEM217
TBC1D22B
GYS2
ADAM2
DNAH8
RNF138
FANK1
FAM110B
CRIM1
ADGRG6
COL23A1
PRR7
MAD2L1BP
GTPBP2
DBN1
KBTBD2
FURIN
KLHL9
IFNA6
CST2
GRAMD1A
UTP20
ABCB11
TMEM87A
GANC
TXK
SLC2A9
KNSTRN
CCDC86
NAPA
CAMKK2
GREB1
ST6GALNAC6
ST6GALNAC4
GPRC5A
SYVN1
FAAH
SLC36A4
TJP2
MAPK10
OR1L1
FAM107B
LOC105370980
DPYSL3
LRRC25
NRARP
GTF3C6
OR6V1
KRTAP9-9
KRTAP9-6
INPP5A
EEF2K
MCM7
AP4M1
PMVK
CDC42EP3
H4C2
H3C2
H2AC4
H4C1
H3C1
H1-1
STRN
SHROOM3
MAP3K6
FCN3
EPB41L4B
CDHR3
MTHFR
CLCN6
BRD3
MKRN1
NAAA
ZNF541
CCL16
CCL14
C9orf152
FBXL5
SUGCT
MPLKIP
TRIM33
ZIC5
PANK1
FYB2
C1orf68
LNX1
HOXA3
HOXA4
EVL
PRKAR1B
GMNN
FOXQ1
SFTPC
PTPN13
KLK13
HOPX
BMP1
MRPL21
IGHMBP2
HERC5
USP36
SELENOS
JRKL
CCDC82
TSKU
TXNDC16
RHOU
KRT28
GPR137C
EPHB3
RAD52
C2
MMAA
SNAP91
SMOX
LY6H
KRT36
KRT35
CHMP4C
AMACR
CBR3
SLC13A1
NMT2
ANKRD35
RGS3
RPTN
CORO2A
TMEM210
LRRC26
LXN
TAFA4
PGLYRP1
IREB2
KIF3B
RND3
HPCAL4
GPR45
AK4
CPT1A
SCUBE2
GSG1
TBC1D9B
PITPNM1
FAAP24
CEP89
LFNG
NBR1
FBRSL1
KRTAP22-2
IL15RA
LPCAT3
SREBF1
TNFSF15
H4C3
H1-6
MMP20
OTOL1
ODC1
HS3ST4
TMEM68
TGS1
ADAMTS3
TMEM45B
ST3GAL6
FOXN4
VPS13A
NR2E1
NAA20
MMP15
DIO1
ACSS1
TBPL1
NAT1
MTHFS
ITLN1
CPA6
S1PR1
ARHGAP40
MED30
RP1
DNASE2B
RDX
RIN2
C11orf24
ZNF200
B3GNT6
SLC6A11
GOLPH3
TET3
CDC14B
PRXL2A
ITPR3
GPRIN2
MS4A7
OSBPL6
MRPL33
MPHOSPH10
MCEE
TAS2R60
GKN2
SLN
VPS13B
ATL1
VPS26B
NCAPD3
MAP4K5
VEGFC
WDR55
DND1
SLCO1A2
KLHL35
ZNF527
CGN
ZCRB1
PPHLN1
SMAD4
SLC10A5
IMPA1
RAB11A
UCK2
CLCA2
ARHGEF3
CPLANE1
AKNA
GPR65
TMCC3
RAPGEF5
ZNF579
SRGAP3
PACSIN1
NF1
AMHR2
ZNF619
OTOR
B3GAT1
SKIL
UBB
BTNL9
PGBD3
HEXIM1
TMTC2
CAPRIN2
FYN
ANO6
DPY19L4
MRAP2
RPS27
RAB13
CCND3
TAF8
LRMDA
GPR37
RNF115
POLR3C
UNC5A
MLLT11
CDC42SE1
TCHHL1
LOC100131107
C1orf56
RRP1
SEMA6D
PDZK1
CD160
ZNF563
MB
MYO7B
ACER2
IWS1