ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976675 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◣ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

IKZF3
MYEOV
ERBB2
MTRNR2L8
MIEN1
GRB7
PNMT
TCAP
ARID3B
TES
SLC45A4
ID1
TMEM199
SEBOX
POLDIP2
SSH3
MTRNR2L2
MSH3
DHFR
IRS2
SFSWAP
ERAL1
MTRNR2L1
KIF5C
ASB2
TOX2
CD300LF
STARD3
PPP1R1B
RBBP8NL
IL1R1
C8orf33
CRBN
UBE3B
LTBP2
KALRN
SPIDR
NECTIN4
TET3
TOMM22
RAPGEF3
NAGPA
TNS3
ABCC10
BHLHE40
TXNRD1
VIRMA
STAT6
RBM48
PEX1
TSR3
GNPTG
GLTP
GRHL2
C1orf174
GSR
APOBEC3B
SALL4
TRIB1
SLC35B1
LYPD6B
RIOK2
ELFN2
PSMB7
PSMD3
IER3
FLOT1
MMP13
MRPL45
KRT1
POLR3F
DZANK1
IDH3B
ZBTB7C
C8orf74
MOCS3
DPM1
SQSTM1
FOXJ1
RGPD2
RGPD1
LAMP1
MED11
PHAX
ALDH7A1
SENP1
PFKM
CYP2A13
OSER1
GRAMD2B
EIF5A2
EIF2D
SUPT6H
SDF2
CD55
NOL4L
YAP1
FLOT2
DHRS13
ZNF789
ATP5MF-PTCD1
ATP5MF
SOCS2
DNAJC11
PISD
ITGB5
ANGPTL4
ANXA10
GPRC5A
IRF2BPL
SPNS1
LAT
THAP7
SPATA25
NEURL2
CTSA
POLR2J3
ZSWIM1
ELF3
OSBPL2
MUC3A
RARB
UNC13D
BCKDK
KAT8
SPINK1
GATB
ESRP2
TRIM29
DUX4
SAP30BP
RECQL5
LIMA1
RTF2
FNTA
RXRA
TMC7
REN
RDX
HNF4A
FOXO6
SEMA3B
LSMEM2
OR9A4
TMEM207
PSMD1
MTBP
MRPL13
CCDC59
TRMT1
NACC1
TRIOBP
TFPT
PRPF31
HES1
CYP24A1
PLAGL1
CDKAL1
SERPIND1
TRAF4
VAC14
MUC4
LZTR1
MRTO4
EMC1
FAM98B
ZNF335
ZMYND8
ZZZ3
EPYC
SIGLEC15
SKIL
UPP1
DHRS3
SUMF1
POLR2J
CLPTM1
APOC2
LANCL2
SLPI
CYP27C1
SPIRE2
SUPV3L1
SLC27A5
ZBTB45
SLC35F6
MLX
HSD17B1
COASY
RARG
CARD16
AAAS
ZNF585B
ZNF383
SLIRP
ALKBH1
KLF6
MARVELD1
HAGH
FAHD1
CENPBD1
EPS8
SYT12
ISY1-RAB43
ISY1
CD109
UBE2I
RMND5B
RPTOR
SLC25A45
FRMD8
IL1F10
HEXA
FAIM
KLF9
SRI
ATG14
LTO1
DMAC2
ERICH4
TJP2
SMG7
SUPT7L
SLC4A1AP
PLD1
CIPC
HR
REEP4
DPP8
PGAP3
SCHIP1
CDKN1A
ACP3
TRA2B
SEPTIN9
RBBP5
GET3
NGDN
BUB1B
SART3
ISCU
GADD45A
NKD2
MEOX1
KIF25
DOK3
DDX41
UBAP1
ERAP1
SYBU
ABT1
TRMO
ART1
BCL3
UNKL
NUP214
TMEM205
RAB3D
CCDC159
C16orf91
PMEPA1
ZFYVE26
RAD51B
LAMA3
SPAG16
PPCDC
RIPOR3
C5orf63
ATF3
SPTLC2
KRT31
CYP4X1
TXN2
UXS1
WSB2
BIRC2
AXL
RPS5
H2BW2
MRPS10
UVRAG
RHOD
SLC25A53
FAM199X
TMEM41A
STARD4
SMYD1
MTRNR2L9
SLC25A51
SLX4IP
MKKS
TGFA
RAD51AP1
C12orf4
ST6GALNAC1
TMEM178B
ACOX3
SULT2B1
GABARAP
ELP5
CTDNEP1
UBE2H
TRMT12
SMN2
SMN1
ATP13A3
TRIQK
CCND3
TAF8
ERCC1
HOOK2
ZNF408
ARHGAP1
JUNB
RRP15
BCAS1
SAMD10
PRPF6
EDARADD
ERI1
SUPT5H
RPS16
SGMS2
LSG1
KIAA0895L
EXOC3L1
E2F4
ELMO3
TMCO6
NDUFA2
IK
KLF10
RNPEPL1
DUSP28
ANKMY1
UPK3B
KRR1
FEM1A
MEST
ZCCHC4
NDST1
PDAP1
BUD31
DGAT2
RPS26
RGS3
GFM1
LRRC23
RAB40C
ZNF365
KMT5B
MTA3
KCNG3
RAE1
MTRNR2L3
ATAD2
TOP3A
SMCR8
ZSCAN25
BANP
STX6
CA5A
PLEKHH2
NCAPH2
LMF2
ZBTB7B
LENEP
STX1A
OSBPL7
MRPL10
LRRC46
SCRN2
RCOR3
CSRNP1
GPC1
ZNF696
RAB11FIP2
DBNDD2
SERP1
EIF2A
RETNLB
ANXA2
HSPB1
PMEL
VPS50
HEPACAM2
ZNF576
IRGQ
TACC1
EFHD2
RNF213
CSF3R
GTSF1L
NAB2
TUBG2
PLEKHH3
RDH5
ITGA7
BLOC1S1
PLEKHG3
FXYD3
MRPS7
MIF4GD
GGA3
PRSS22
ALOX5AP
UBALD2
CACTIN
RASEF
MRPL1
NFKBIZ
NAT1
LGALS8
MRPS15
FAM83A
TSN
FAM133B
U2SURP
SRP9
SPRED2
MBD6
DDIT3
DYNLRB1
STMN3
RTEL1
RPLP0
GCN1
UBE2L3
TRABD
SMIM6
MAMDC2
WASHC5
NSMCE2
PTK2
ZDHHC6
VTI1A
EPHB3
BIRC3
UQCC1
LOC102723996
ICOSLG
NVL
MBNL1
MCCC1
SEMA5B
NCBP2AS2
NCBP2
MTUS1
NT5C
CAV3
GRAMD1C
TPRN
TMEM203
NDOR1
STX16
LRRC47
ZNF608
TUFT1
PLA2G2A
CAPN14
ATF6
RASSF6
TSFM
SLC16A5
HABP2
POLR2J2
IRF2BP2
HSPBP1
BRSK1
KCTD5
IKBKB
KLK6
PHB2
MAPKAPK5
METRN
HAGHL
CCDC78
ANTKMT
AMN1
PLEC
LDHD
FOS
NDUFA9
AKAP3
LCN2
TMEM248
EPB41L1
STON2
WDR70
NUP155
RRNAD1
ISG20L2
ZSCAN22
ZBTB38
NCOA3
TIGD5
EEF1D
INTS1
ZG16B
ABLIM1
KYNU
KCNJ14
GRWD1
TAS1R1
NOL9
KYAT1
SSNA1
ANAPC2
LRRC8A
REXO1
PPARD
MYNN
ACTRT3
VCAM1
RAB3IP
HUS1
ZNF514
ZNF2
SMG8
RPS14
NPM2
NUDT5
CDC123
LIPK
C5orf51
GSDMD
UPK3BL1
MAGOH
SPDYE2B
SPDYE2
PGP
MLST8
BRICD5
KMT2A
IP6K3
CASKIN1
CTNNA1
DNAJC30
BUD23
SPARCL1
PPIL4
ARL14EPL
TCF7
FAM25G
FAM25C
CCNT1
KRT80
PTPRB
DNAJB12
PKP2
LRP6
KMT2E
CCDC88B
DDX46
TGFBR2
RPEL1
SELPLG
IGF2BP3
ANO6
PAXBP1
TMEM208
LRRC29
EIF3F
CLCN5
TIMM50
MRPL53
MOGS
AGPAT2
AQP6
AQP5
HNMT
ALKBH3
ZFHX3
SLC39A4
CPSF1
BMP3
RAB44
DOK7
PUS10
PEX13
BAHCC1
BRPF1
DNAH5
CDH18
FBXO32
ECHDC1
DPP3
GTF3C5
PMPCB
ZP3
LY6D
CCDC124
TBRG4
CCDC97
NAPB
TEFM
PTK2B
EFR3A
LRCH4
FBXO24
EFCAB14
PDCD6IP
MAP3K7
SETD1A
ORAI3
METTL27
TMEM270
CCSER1
CPA1
DUSP2
ASTL
TTC32
SPINT2
PPP1R14A
BCL2L13
POLD4
ATP6V1E1
TPST2
SNRPC
PLEKHA7
THRA
MED24
GOLGA7B
SEC13
CNP
PHTF2
TMEM60
PEPD
LSM14B
ENTPD7
NAALADL2
YJU2
UBQLN1
FANCD2
CDC42EP4
DPH7
CASC3
PDE6D
COPS7B
KDM2A
OR2W3
NUS1
HAX1
NR2F1
SLC31A1
FKBP15
ECH1
NIBAN2
PRR3
GNL1
NOTCH3
TRRAP
TMEM130
LIN52
ALDH6A1
PCOLCE2
TRMT2A
RANBP1
ARID2
PTPRR
C19orf33
LFNG
ABCC3
WNT7B
RALGDS
PSME3
BECN1
D2HGDH
GJB5
GJB4
SLCO4A1
PIK3R3
VPS52
RPS18
B3GALT4
ZNF17
POMZP3
FAM184A
CBLC
LGR6
TSPAN1
P3R3URF-PIK3R3
P3R3URF
RHOV
ING4
TBL2
PRKAG2
LURAP1L
ZGPAT
ARFRP1
VARS2
GTF2H4
MYBL2
MRPL27
EME1
CDC23
KPTN
NAPRT
MROH6
PTPRF
SLC25A11
RNF167
PFN1
USP30
OAZ3
MRPL9
ENO3
TTC31
CCDC142
MCM7
AP4M1
SOD2
MIDN
WTAP
SPRR2F
COA8
BAG5
CLCN7
BCAR1
RNF10
MTIF2
VCAN
TBC1D23
COQ5
RNASEH2C
KAT5
SF3B3
COG4
SERPINE1
CIDEA
CELA3B
TBC1D2
MALL
ZFP42
TRAF7
VWA7
PPL
METTL2A
GOSR2
NSA2
GFM2
TAGLN2
WDR97
MAF1
CYC1
TDG
C12orf73
SYT1
LY6E
TMA16
DYRK1A
KRT13
TRIP4
PCLAF
LNX1
PSMG2
CEP76
TXNL4B
DHX38
MAP3K7CL
ADGRG7
NDRG1
CCT8
RABL2A
KRT86
TMEM18
TSEN34
CALM2
TIMM23
AURKAIP1
JMJD7-PLA2G4B
JMJD7
TIPARP
PPWD1
CENPK
PLA2G4B
ZNF497
A1BG
UQCRHL
RALYL
PSMC6
ERO1A
LRFN4
LARP1
GRAMD1A
NOL8
CENPP
MAN2C1
MEAK7
TNFRSF10B
SNRNP200
TRIM16L
SPHK2
RPL18
FAM83E
METTL2B
FAM162A
CCDC58
PSG1
TRIM55
SREK1IP1
CWC27
STAM2
GINS1
POU5F1
SEMA6A
FBXL18
PSMD12
GPR39
SLC39A2
METTL17
GNG4
JRK
ERP27
PSCA
TACR2
CRTC1
MED20
BYSL
ANXA1
SH3GL3
ZSCAN21
MRPS35
ATP6V1G1
ZNF165
OR1F12
MED1
FSCN1
PLXNB2
THUMPD2
WDR86
SH2D4A
RFC4
DDX23
GABRR1
HSPA9
ZMAT2
HARS2
HARS1
PRKG2
TMEM123
TMEM230
PCNA
DDB2
RHEBL1
KMT2D
GRK7
MB21D2
APOBEC4
BBS10
CDK12
DENND2B
ITFG2
RNF223
COX16
CD86
VPS11
TLE3
CORO1C
APCDD1
SCARF2
RAG2
IFTAP
SNRPE
MRPS11
MRPL46
NFKBIA
SENP2
RPL37
CARD6
TMED4
DDX56
PIM1
CARD18
SLC12A4
TRIM65
MRPL38
VARS1
BCAT2
TOMM70
LNP1
PLPP2
MACC1
RARA
CXCL5
CCAR2
C8orf58
COMMD2
GOLGA3
STOML2
PIGO
LRMDA
RP1L1
FBP1
PRSS8
HERC3
FCF1
AREL1
PRR15
TRIM56
SLC33A1
LEKR1
LGALS7B
TACO1
PSG5
ODF1
XAB2
STXBP2
PCP2
CLDN4
ALDOA
SPOCK2
SNAI2
LIN37
PSENEN
CTDSP2
SLC2A4RG
LIME1
PIK3C2B
MAP2K3
NTSR1
NUDCD3
PPP1R37
USP31
LEO1
MUL1
ANP32A
NOTCH2NLC
SMAD5
GTF2H3
EIF2B1
SOX9
CHRM3
SRFBP1
SERPINB2
TH
INS
SSBP1
RGS20
ATP6V1H
FMN1
CLDN24
CLDN22
UBE2Q1
CHRNB2
MB
RPL23A
RAB34
PROCA1
NAPA
BRIX1
SUSD1
CD36
ZKSCAN2
STK19
LOC110384692
DXO
C4B_2
C4B
C4A
CYP3A7-CYP3A51P
CYP3A7
FOXK1
NUP107
URM1
RPTN
IPO11
DIMT1
TMEM120A
PHF5A
ACO2
TSC22D4
NYAP1
MME
ZNF805
AURKC
LEP
SKIDA1
MLLT10
NDUFAB1
CRKL
CEP63
ANAPC13
HEMK1
C3orf18
ADAMTS16
ZNF703
STEAP3
PRKRIP1
TTC17
HOXA3
RCE1
HOXA4
GLCCI1
HOXA5
GTF2IRD2B
KCNH8
TIMM9
KIAA0586
ATG9B