ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976673 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◣ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

IKZF3
MTRNR2L8
MTRNR2L2
MSH3
DHFR
MYEOV
TMEM199
SEBOX
POLDIP2
ERBB2
MIEN1
GRB7
ARID3B
KIF5C
TES
MTRNR2L1
PNMT
TCAP
IRS2
ERAL1
SLC45A4
MRPL45
TET3
RARB
C8orf33
SFSWAP
CD300LF
UBE3B
RGPD2
RGPD1
RBBP8NL
MED11
CDKN1A
POLR2J3
CRBN
POLR3F
DZANK1
CLPTM1
APOC2
C1orf174
PSMD3
DUX4
SSH3
BHLHE40
VIRMA
MUC3A
GRHL2
TRIM29
ESRP2
TSR3
GNPTG
PSMB7
ASB2
SLC35B1
LAMP1
PGAP3
SCHIP1
SERPIND1
RDX
KRT31
ID1
RBM48
PEX1
TXNRD1
ZNF585B
ZNF383
ATF3
UNC13D
STARD3
PPP1R1B
APOBEC3B
MMP13
TRA2B
SPIRE2
LZTR1
POLR2J
LTBP2
TOX2
REN
CD55
TJP2
TFPT
PRPF31
HES1
MTRNR2L9
MTBP
MRPL13
UNKL
C16orf91
H2BW2
ISY1-RAB43
ISY1
PLEKHH2
CYP2A13
UBQLN1
MBNL1
DMAC2
ERICH4
POLR2J2
SLIRP
ALKBH1
RRP15
ELF3
HAGH
FAHD1
RAB3IP
MRPS11
MRPL46
RBBP5
VAC14
RAD51AP1
C12orf4
SKIL
STAT6
IDH3B
NECTIN4
SMN2
SMN1
THAP7
TMCO6
NDUFA2
IK
NDUFB3
FAM126B
ERCC1
TNS3
JMJD7-PLA2G4B
JMJD7
PLA2G4B
PISD
RMND5B
SOCS2
ITFG2
SPINK1
PLLP
SQSTM1
PHAX
ALDH7A1
GATB
HEXA
FOXJ1
RASEF
FLOT2
DHRS13
TMC7
TOMM22
SPIDR
TRMT1
NACC1
UBE2I
RXRA
MRTO4
EMC1
CLDN9
CLDN6
RAPGEF3
YAP1
LPCAT3
STX16
TSFM
IRF2BPL
CYP27C1
RETNLB
GFM1
U2SURP
TTC17
SALL4
OSER1
SAP30BP
RECQL5
GRAMD2B
DHRS3
ABCC10
SUPT6H
SDF2
MOCS3
DPM1
CARD16
RPS26
VPS50
HEPACAM2
SLC25A53
FAM199X
ZNF576
IRGQ
NUGGC
ELP3
ZNF608
MAMDC2
SMG7
NAGPA
TBRG4
PCNP
LYPD6B
KRT80
NDUFAB1
TRMO
SUPT7L
SLC4A1AP
TRIB1
GPRC5A
PUM2
ART1
ZSCAN25
ZMYND8
METTL2A
SUMF1
POLD4
RECQL4
LRRC14
MFSD3
GPT
SPATA25
NEURL2
CTSA
RGS14
LMAN2
SLCO4A1
DDX46
RALGDS
SLC27A5
ZBTB45
DNAJC11
RNASEH2C
KAT5
SNRPE
RGS3
CDKAL1
FAIM
BCL3
SENP1
PFKM
C19orf48
ZNF789
ATP5MF-PTCD1
ATP5MF
EPHB3
ELFN2
STYXL1
EPB41L1
EIF3H
CXCL5
NEUROD2
SLC25A45
FRMD8
CSRNP1
NIBAN2
TTI1
RPRD1B
CCDC59
TAS1R1
NOL9
STON2
TRAF4
CCDC88B
MTUS1
TBL1X
NAPB
ATG14
HR
REEP4
MTO1
CGAS
ZNF17
WDSUB1
ASB6
UXS1
AGTPBP1
COLEC11
BRF2
FOXO6
NPM2
MS4A5
GET3
C8orf74
PLEKHG3
LGALS8
SLC16A5
PTPRB
SERP1
EIF2A
TTC31
CCDC142
BRIX1
ZSCAN22
RARG
SPAG16
HS3ST6
PRKRIP1
FNTA
PPWD1
CENPK
DDX23
WSB2
KRT1
KIF25
DIABLO
HEMK1
C3orf18
METTL2B
SUPV3L1
CCDC97
SMIM41
ATG101
RAE1
MTRNR2L3
IL1R1
UPK3BL1
SPDYE2B
SPDYE2
TJAP1
BNIP1
CHMP7
DYNLRB1
BCAS1
PPP1R11
TFAP2C
POLR1H
ATAD2
OSBPL2
ZNF3
COPS6
LSG1
METTL27
TMEM270
VPS33A
SRI
KLF10
PIM3
SPAG4
TRIP4
PCLAF
KALRN
RTF2
PSME3
BECN1
ECHDC1
ZGPAT
ARFRP1
SYT12
TOP3A
SMCR8
CASC3
NME1-NME2
NME1
PLA2G2E
ZNF165
OR1F12
HUS1
PRKAG2
DOK3
DDX41
PTPRR
EIF3F
CYP4X1
MAPKAPK5
GADD45A
SH2B1
TIMM22
PSG1
MFSD10
TUFM
ZNF865
ZNF524
FIZ1
RCE1
ZZZ3
BAIAP2
BMS1
MED20
BYSL
DLC1
RBPMS
DOK7
CD109
FAM133B
GRK7
TXN2
BIRC3
LARP1
EIF5A2
OR9A4
PHF3
S100A2
C5orf63
OR2M2
DAZAP1
PHRF1
KYAT1
PSMD1
DPP3
TMEM178B
LRRC8A
GTPBP4
OR2W3
RIOK2
LIMA1
IRF2BP2
SSUH2
AXL
GTF3C5
MRPS10
TIMM50
RBM42
ATG9B
ABCB8
UPK3BL2
GTSF1L
MB
ECH1
STMN3
RTEL1
RPLP0
GCN1
FIS1
CLDN15
MEOX1
NOXO1
TRIM16L
STX6
FEM1A
CLCN5
TBL3
RPS2
RNF151
MED6
TBL1XR1
SMYD1
ZNF830
CCT6B
PTPRU
MECR
ATP6V0D1
AGRP
GLTP
TNFRSF10B
ZC3HC1
ZRANB2
VPS37A
CNOT7
MIEF1
KRR1
GSC2
MRPL1
HOXA3
HOXA4
HOXA5
TMEM95
KCTD11
PSG7
WASHC5
NSMCE2
ANXA10
EIF1AD
CST6
BANF1
MARVELD1
POMZP3
CDK5RAP2
AQP6
AQP5
YJU2
ZNF408
ARHGAP1
TIPARP
STX1A
ZNF514
ZNF2
TBC1D17
PNKP
AKT1S1
FRMD7
IL36B
ITGB5
SPHK2
BNIP3L
RPL18
FAM83E
ATP13A3
COX16
GNG4
PLA2G2A
PPP1R35
ZCWPW1
MEPCE
TRMT2A
RANBP1
ERAP1
TTC32
SSNA1
ANAPC2
RPTN
KCNAB1
SEPTIN9
USP30
C19orf33
VPS11
NFKBIA
THBS3
MTX1
PPP1R37
PRR3
GNL1
PSMG2
CEP76
ZFHX3
RAB40C
PDCD6IP
LYPLA1
LRRC23
CHRM3
ANXA2
LANCL2
GPATCH3
GPN2
ATP6V1C1
PDE6D
COPS7B
UTP20
PBX2
GPSM3
AGER
DDX11
BIRC2
PMEPA1
PDAP1
BUD31
ZDHHC6
VTI1A
TCF24
GLCCI1
SLX4IP
MKKS
TPD52
TRIOBP
MLX
HSD17B1
COASY
MMP10
FCF1
AREL1
ZFP64
COL9A3
TMEM205
RAB3D
CCDC159
CDK12
MED1
TMEM262
SLC2A4RG
LIME1
EVPLL
RPL26L1
NUS1
BTNL8
HOOK2
JUNB
UBAP1
CDC6
KLF9
PHLDB2
VCAN
EIF3E
UQCRQ
LEAP2
GDF9
ZBTB7B
LENEP
BCKDK
KAT8
SULT2B1
RPS12
ZNF579
NGDN
AP5S1
CDK11A
TSR1
SGSM2
NUP214
TSN
MEAK7
MRPS7
MIF4GD
GGA3
FSCN1
ZBTB38
FAM184A
SH3GL3
MED4
ASH2L
NKD2
ABCC3
TNFRSF1A
PNO1
EXOC5
AP5M1
ZNF335
CRTC1
CPA1
NDST1
PUS10
PEX13
SART3
ISCU
ENPP3
MED23
PTAFR
AURKAIP1
CCNT1
RPL23A
RAB34
PROCA1
HNF4A
RPS14
TLCD1
NEK8
C7orf65
COG2
PMPCA
ENTR1
MTHFR
CLCN6
PLEC
TMEM63A
DGAT2
SF3B3
COG4
TUT1
MTA2
PGGT1B
SEC13
DNAH5
SCARB1
LSM5
AVL9
ERLIN2
OR2T1
FRG2
PHF5A
ACO2
TMEM101
KLF6
TMEM208
LRRC29
PPL
PRSS22
SPTLC2
PIM1
ADGRG7
YIPF3
POLR1C
LRRC73
KCNJ14
GRWD1
CD86
NUDT18
PTPN2
PLAGL1
KMT5C
URM1
GTF2H3
EIF2B1
ERGIC2
DNTTIP2
SMIM8
GJB7
NVL
HSPBP1
BRSK1
NOTCH3
RRNAD1
ISG20L2
REG1A
RBP2
TGFBI
SPNS1
LAT
OAZ3
MRPL9
DNAJC30
BUD23
ANXA3
HCAR2
KRT17
MUL1
RCC2
GSR
ZBTB7C
TEX28
ARID2
LRFN4
SF3A3
NUDCD3
MAP3K7
DBNDD2
NDUFB5
MRPL47
GPC1
RWDD1
ALKBH3
MRPL48
KPTN
DOT1L
PLEKHN1
NOC2L
KLHL17
ZFPL1
CDCA5
LDHD
RBM19
OPA1
ATP6V0D2
MACROD1
SKIDA1
RDH5
ITGA7
BLOC1S1
MLLT10
HSPB1
FOS
WDR53
FBXO45
FAM162A
CCDC58
ACP3
CCDC102B
PRKG2
PARL
SNCAIP
C5orf51
ANKK1
PHB2
AMOTL2
LY6D
LGR6
NDRG1
ENPP6
SEMA3B
LSMEM2
PSMA1
OSBPL7
MRPL10
LRRC46
SCRN2
PDE3B
NDUFA9
AKAP3
IPO11
DIMT1
TNFRSF12A
THOC6
HCFC1R1
SEMA4B
WASHC1
GRAMD1A
SNRPB2
E2F8
HACL1
BTD
CERK
RIPOR3
INTS1
UPP1
PLD1
EFHD2
FOXA2
MRPS15
FAM83A
PFDN1
ZNF16
PPP1R13B
ARHGAP30
SPINK7
TCERG1
CDH18
SETD3
CCNK
MICAL2
UQCC3
LBHD1
UBXN1
PKD1
OPN1MW3
OPN1MW2
OPN1MW
ZCCHC4
GSN
SYBU
FAM240C
TEKT2
ADPRS
KCNIP2
POM121L12
TLR5
HMOX1
PPFIBP2
PCID2
CUL4A
MRPL55
OR6B2
NDUFA10
SDC1
MYL12A
VWA7
SETD1A
ORAI3
SLC26A8
MAPK14
ZMAT2
HARS2
HARS1
DRG2
SPSB3
MRPS34
EME2
NME3
MYL12B
RARA
CORO1C
LY6E
ITGA3
NOL4L
RHEBL1
UTP3
KMT2D
PIK3C2B
RINT1
PUS7
SNRPB
APOBEC4
ZNF341
MAGEF1
QRICH1
TSC1
GFI1B
MRPL40
HIRA
LMNA
IL1F10
PRKAR2B
CDC5L
TLL2
CTTN
MRPS26
GNRH2
CATSPER2
CEBPB
TAGLN2
CAPN14
CDC23
RTN2
PPM1N
TTC6
FOXA1
CDH1
VASP
IER3
FLOT1
EPS8
LNX1
MTIF2
PSMC3
IRF6
MRPS22
SEMA6A
TCF7
RPS5
CSTF1
AURKA
NAB2
RAD52
WNT7B
GTF3C3
C2orf66
AP5Z1
PAXBP1
BCAR1
PTP4A1
DNAI2
CLPB
SPTBN2
TMPRSS4
SMIM35
NUP107
ZNF436
CYP24A1
TPST2
TAF6
MBLAC1
CNPY4
NUP85
ING5
TBL2
FADD
TMEM250
MBD6
DDIT3
SREK1IP1
CWC27
SEC61B
ALG2
RP1L1
TMEM41A
CNPY2
LGALS7B
B4GALNT3
DDX49
COPE
SRP68
ZACN
GALR2
FURIN
FOXN4
TIMM9
KIAA0586
MORF4L1
UVRAG
UQCRHL
LURAP1L
TXNL4B
DHX38
PDE12
IQANK1
FAM83H
CDK5RAP1
ACOX3
ADAR
LIF
XPO4
SLC35F6
DENR
MAN2C1
GUCA2A
PTPN12
SLC25A51
DUS2
DPEP2NB
DDX28
CARD18
ADAMTS16
CYP26B1
BANP
CA5A
VSIR
ANAPC5
PPP5C
KYNU
TUBG2
PLEKHH3
SYT1
KCNJ15
TRIM4
GJC3
RGS20
ATP6V1H
ELAPOR2
SPINT3
CASP5
THRA
TIPIN
SEMA3F
PPCDC
RNPEPL1
DUSP28
ANKMY1
POLD1
NR1H2
ANXA1
NUDT5
CDC123
TOMM6
PRICKLE4
FRS3
STOML2
CTSD
PIGO
ONECUT3
STK36
RNF25
IL16
KCNK15
CCDC43
MPPED1
LONRF3
CASTOR1
PTPRF
PTK2
WDR97
MAF1
CYC1
CD36
PARP4
SFTPD
UPK3B
CLDN4
MALL
CWC25
FASTKD2
OGG1
SLC25A11