ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: DRX402530 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◣ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

PPIG
KCNJ15
ZNF562
LOC102724265
YTHDC2
CEP85
CCDC200
ZNF623
ACYP2
LUC7L2
FMC1-LUC7L2
TM9SF4
FAAH
CCDC130
PRIM2
ARHGAP39
CYP17A1
NOS3
MTRNR2L2
YPEL3
FEM1C
METTL6
EAF1
SNIP1
IGSF3
PRELID3B
FAM234A
MTRNR2L8
CEP72
STAU1
JAGN1
ACOX3
TRMT44
POLE4
RBM28
SNX16
RPS7
FAM20B
HARS2
HARS1
UFSP2
ZSCAN31
AGGF1
MTRNR2L9
FAM25E
ARHGAP19
TOP3B
BSDC1
GDPD5
CD47
SAR1A
EPS15L1
MAPK1
AUNIP
ZNF426
JMJD1C
REEP3
IQSEC1
KMT2A
DNAJC14
PRAME
PFKFB3
ANKRD54
BTD
NDUFS7
ELOVL2
ACTL8
ZNF114
BRWD1
EIF4E
C22orf39
FABP6
ALDH3B1
RABGAP1
REXO4
MRPL40
HIRA
TMBIM1
TCP11L1
BAAT
HOXC5
CNGB1
DPY19L4
WDR74
ZBTB40
TOMM5
DDX19B
DMAP1
UBE2L3
CLK4
RBBP5
RIPK1
PALM
YPEL1
BLM
MED23
TMEM70
STX16
PPM1F
RAD21
CCDC9
RPL26L1
DCAF10
GK5
ATF7IP2
CLPB
BMF
LRP5
CEP164
CBX1
GNL3L
RAB11FIP1
N4BP3
BPIFA2
DQX1
PRPF3
TMEM222
ZNF117
TIPARP
RPAP1
SSBP1
EPS15
MFN1
ERAS
ZMPSTE24
SUGCT
MPLKIP
CCDC112
CCAR2
CBR1
CCDC120
CHAF1A
FAM136A
RPL41
TMEM41A
ATP23
ATP1A1
HLA-E
CCNI
ZBTB6
PIGW
MYO19
NUTF2
CENPT
TSACC
CCT3
BMS1
ADPRS
ASCC2
PGAM5
RSL1D1
PAK4
AOPEP
DPF2
GTF3C5
TFDP2
PAFAH2
RPS14
PKMYT1
SMARCD2
SPRYD4
KRTAP10-5
COIL
CFLAR
NUBP2
USP30
BCL9L
BRPF3
PEBP1
GEMIN7
RCOR3
CD5
GTF2A2
DHX37
AURKAIP1
NPAS4
ZBTB45
DNAJB12
DUS1L
RANBP17
KNL1
PCK1
ZNF391
ZKSCAN2
NDUFA6
AGK
KMT2D
DRG2
SUN5
TMEM242
TPM1
ALKBH3
GBA
WDR70
PPP6R3
PROCA1
MRPL16
ZNF473
VRK3
PLD4
ITGB3BP
EFCAB7
TRMT2A
RANBP1
YDJC
SEH1L
INO80C
CELF1
PTPMT1
LRG1
DPP9
MICOS10-NBL1
MICOS10
DHX33
PEX3
ADAT2
CDK11B
CDK11A
COASY
EPHB4
WDR4
MRTO4
CDK5RAP1
FAM98B
ZFP41
SCAND1
SLC29A2
METTL26
HLCS
OXSR1
TMEM65
ZNF839
GSTA4
KDM3B
SMG8
AARS2
AP5B1
NR2C2AP
IFT140
CRAMP1
ATXN7L2
PSMG2
CEP76
EIF4A2
CHCHD2
B4GALT7
MRPS18A
FMC1
N4BP2L2
ATG101
TOR1A
KLHL20
ZNF561
GRPEL2
DUSP6
PDE11A
NUF2
PAXBP1
MTF2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SAMD4B
SF3A3
PUM1
NME1
COX16
TTLL12
RPS29
EIF2D
RAB37
YWHAQ
INTS12
GSTCD
DCP1A
RPL27
FRA10AC1
MRPL44
MAPRE2
GDPGP1
CIB1
HMGB1
NDUFB3
FAM126B
DSTYK
RABGAP1L
USPL1
SKP2
LMBRD2
FAM227B
DTWD1
TBC1D19
TRIP4
ZFP30
GTF2H2
STX18
SELENOH
SLC24A1
POLR2J3
TTC32
RPL37
TOR1AIP1
SLC33A1
COMMD2
DNAJC25-GNG10
DNAJC25
TARS2
MRPS31
POLR3B
PPIP5K2
METTL25
CCDC59
ZNF408
ARHGAP1
ALG10B
TFPT
PRPF31
RERE
UTP3
NSFL1C
SLC25A51
SLC44A1
RBBP9
CAT
GTF3C3
FRG1
IPO4
SFT2D3
RAD54L2
EIF3F
GTF2H4
INTS5
VTA1
NMBR
EPS8
BCAR3
LSG1
GTF2H2C_2
GTF2H2C
SUPT7L
SLC4A1AP
GOLM2
HTR5A
STAT3
ITGA4
CAMK1D
RTTN
TEFM
EIF1AD
BANF1
C3orf14
PPP6R1
TACO1
RNF187
ZNF829
ZNF568
DRAP1
C11orf68
TDP2
ACOT13
RILP
SNAP47
NEMF
PSMF1
ATR
KDM3A
COPS7B
ORC4
MBD5
NBN
FAM207A
TMEM43
CHCHD4
SNX17
EIF2B4
MTERF4
MRPL21
IGHMBP2
JMJD4
TRUB2
COQ4
WDR11
TATDN3
NSL1
ILF2
FGFBP3
ATP5MC2
KANSL3
WDR36
ZNF540
TTC26
SAR1B
MOB4
MRPS18C
HELQ
FAM133B
MRPL1
ZNF571
CCDC97
HSPE1-MOB4
HSPE1
HSPD1
WDR43
AKAP10
GALK2
ZNF226
C17orf75
IST1
MTIF2
SCNM1
LYSMD1
POLR3E
PDE4DIP
GTPBP3
TMEM68
TGS1
MMP7
KIAA1549
GFM2
CPPED1
TUT1
GABPB2
WDR55
COPS4
DDX18
CTNNB1
MRPS23
KDM1A
SMG5
BNIP1
CHD1L
SEC13
ZCCHC4
SNRPB
MRPL48
MAIP1
RUVBL1
NDUFS3
KBTBD4
NR1H3
ACP2
OTUD7A
ATF7IP
TTI2
RPS20
NUP54
RAB30
CBWD5
TPR
ODR4
ZSCAN25
ZNF609
MAN2C1
POLG
CFAP298-TCP10L
CFAP298
DCLRE1B
AP4B1
C8orf37
CCNC
NCOA7
CBWD3
TMEM101
TTC4
MNAT1
PRPF18
FAM228B
NOTCH2
ADRM1
SLTM
KLHDC9
MRPL30
MITD1
RMND1
ARMT1
TSGA10
NOP16
HIGD2A
METTL9
SLC39A13
HNRNPD
EPRS1
EIF3E
TPK1
SF3B6
COX7A2
GMPS
PSRC1
THAP11
PSMD6
MTBP
MRPL13
SDHAF3
BRF2
TSFM
SLC35A3
PSMD3
HUS1
CASC3
ING2
COPS2
MED18
PHIP
DEFB124
PARP2
NAA20
OPA1
CENPV
SMU1
NCBP3
SNRPD1
CDC73
TGFBR2
MRPL3
BCL9
SNRPB2
MTR
PLEKHM3
SRRM3
EXO5
CLTB
GORASP2
NECAP2
TTLL1
VIRMA
MLEC
CRKL
SACM1L
CLUAP1
C18orf21
TRMT5
SLC38A6
CBWD6
ZNF280D
RBM45
RAB18
SESN1
TTC13
PRKAB2
ARV1
CDK19
HAX1
GFI1B
ZNF292
SMG7
ZSCAN30
SNRPE
TIGD1
EIF4E2
ZNF76
PIP4P2
MAGOH
CLTC
R3HCC1
LRP6
COA6
RPS15
C2orf15
PIH1D2
NKAPD1
STOML2
WWOX
MRPS14
U2SURP
VPS13B
ALG10
INO80B
ANKRD40
ANXA2
C10orf88
CALCRL
CEP120
PDCD6IP
RPL5
STX6
SEC23B
CEP57L1
SMIM13
NFAT5
SUGT1
GSPT1
CEP85L
CCDC88A
DDX1
NOXA1
MRPL39
GABPA
ATP5PF
BANP
ZSCAN22
DGKZ
CASS4
NMNAT1
LZIC
RNF6
PPP2R5B
NDFIP1
MAPK1IP1L
IQSEC3
KRR1
DHX16
ZZZ3
MEMO1
NBPF1
CCDC150
ITGAL
PUS10
PEX13
ZNF165
SNRPD3
GUCD1
MRPS33
RNF125
YTHDF2
AAR2
PTPN4
PRMT5
FBXO22
WDFY1
TRAM1
GNB2
CDIPT
LRRC37A3
HNRNPA1L2
RPS19
GLIPR1L2
DHTKD1
SOD2
NUP107
MRPL19
PRPSAP1
MED4
TSC1
MTMR6
PCBP2
RPS3A
SDCCAG8
CEP170
TMEM259
GPAM
TBL1X
ZNF3
DNAJC11
LTA4H
SLC35B1
TMED1
RFX7
TARS3
SLC9A1
HEXIM1
CPLX2
SRP9
ZNF846
XKR7
COG2
ERCC6L2
ATG4C
INTS4
KAT6A
EIF2B3
RESF1
RPS26
NR1H2
RCAN1
SETD1A
CDK12
RABGGTA
CRBN
INKA2
DDX20
RPL38
C11orf49
RALBP1
GARS1
LNPEP
SET
ATAD2
CYB561D1
TVP23B
RAB5C
ATG5
P3H4
ATP5MC3
ACBD6
RIF1
RBL1
MTOR
FAM160B1
RAP2C
FAM13A
FAIM
AMD1
SENP1
PFKM
MRPS15
ZNF770
HIBADH
ZMYM5
SLC39A3
C2CD5
FOXJ3
PPIL3
NIF3L1
PHF21A
DCT
PRRG2
NOSIP
LIPA
PPP6C
ABCG1
STC1
ASNS
ZNF527
EEA1
YBEY
MCM3AP
ZNF341
HEATR1
CCDC174
ANO8
MEX3C
VWA8
DNAJC24
DCDC1
TSPAN10
NPLOC4
MAN2A1
PPP1R11
DDX46
NMRAL1
HMOX2
ZER1
TMBIM6
INTS2
WTAP
ALG14
TRDMT1
CREM
CFAP20
VRK2
C12orf73
MAPKBP1
CIZ1
RWDD1
ZNF827
ATP5MPL
RHOT2
PSMB7
CHMP7
NSUN4
STRADA
SREK1IP1
CWC27
ANKRD36
PPIH
MMACHC
RAD52
MAD1L1
SH2B1
CCDC107
RBIS
ARMH3
MKRN2
TRMT61B
TNPO3
SECISBP2L
RBSN
SELENOT
NEK4
IPO13
ZNF529
NARS1
ARL8B
DISP1
QRICH1
WDR31
METAP1D
LARS2
UCHL5
RO60
TMEM167B
NOL11
TMA16
PLEKHM1
PET117
KAT14
KCTD5
ABCA3
LRRC29
SLC30A6
RRP15
HNRNPH1
BAIAP2
DDX41
TRAF6
RAG1
CSTF2T
RPL29
UIMC1
ZC3HC1
RSAD1
RETSAT
ELMOD3
MRPL42
MEGF8
HDAC1
DCP1B
ABLIM1
CLUL1
ISY1-RAB43
ISY1
THOC5
SMIM12
DPYD
DHX8
RUNX2
WDPCP
TRAM2
MDH1
FBXW7
ALDH9A1
AASDH
SEC31A
DDX27
STXBP3
CUL5
ZC3H6
GOT2
POLDIP3
NOL12
SFSWAP
DHRS13
MFSD8
ABHD18
PTPRCAP
GOSR1
PHB2
LTN1
WARS2
ZNF518A
CALM1
TBC1D22A
METAP1
NDUFC2-KCTD14
NDUFC2
ADAR
NDUFAB1
PRRC2B
ZSCAN12
POLR1F
UFD1
CDC45
ANXA2R
PRMT3
PLK3
FKBP5
MIER1
ZNF398
SIRT4
ZNF286A
METTL8
DCAF17
PARK7
SNX19
PPP1R8
PSTPIP1
ZNF212
DAB1
SYPL1
GCFC2
SPHK2
RPL18
LRRC59
UBE2D3
YJU2
TRIM41
HECTD1
PES1
SCP2
PSMA1
MRPL45
EIF1B
THG1L
TNRC6B
BMT2
ZNF350
OGT
TNFAIP8L1
MIGA1
TMEM30A
SASS6
NUDT15
ZNF461
ASF1A
MRPL38
CGGBP1
STAT6
SLC25A53
S100A4
CLPTM1
ZDHHC6
VTI1A
CDKN2AIPNL
HES3
WDR47
SLC38A2
UBE3B
KCTD10
SPATA13
WDR24
SIRT6
ANKRD24
ADNP
LIG4
FIS1
APEH
ZNF331
STAT1
PDCD2
NDUFA4
HEMK1
KCNH1
GFM1
AP1G1
RPL26
PDE8A
C7orf26
SERBP1
ZNF585A
EEFSEC
NFE2L2
CCNL1
THOC3
RAB11A
FUT10
TBL3
EXOC2
FGD3
TBC1D13
PPRC1
SLC39A6
ELP2
GTPBP10
TMTC2
PSMD11
RPL22
VPS13D
LZTR1
ZNF570
RFXANK
BORCS8-MEF2B
BORCS8
TADA1
FNTB
TMED2
ANKRD36C
AHCYL1
PPA2
GTF2B
ARL14EP
ZNF25
CCNG2
EDC4
VPS72
HDAC2
EIF5A2
TRNAU1AP
ING3
CRLF3
NUP214
ZNF302
KANSL1
GOLGA3
PSMG1
MAML1
ZZEF1
CYB5D2
RGPD1
CALM2
NCOA3
OSGEPL1
PIK3R1
CYREN
ZBTB20
ZNF569
ZNF510
SRSF11
CLASP2
CEP41
CSDE1
YAP1
TTC14
TBPL1
RANBP2
ABHD13
MRPL58
BRIX1
MTRES1
SCYL3
ANGEL1