ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11220465 | HT-29
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◣ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

DUSP6
MMP7
KCNJ15
CBX1
CEP72
RILP
GDPGP1
CIB1
ATP1A1
IST1
MIGA1
TTC13
ARV1
NAA20
FAAH
PTHLH
SFT2D3
PUM1
RINL
SGPP2
ZNF562
BCAR3
NDUFB3
FAM126B
DMPK
LCN2
SLC12A7
RBBP9
SPAAR
OTUD7A
SDCCAG8
CEP170
RNF187
NDFIP1
BMT2
PDE11A
ACYP2
SAMD12
PELATON
RERE
BHLHE40
TBC1D22A
YKT6
CLK4
SAMD4B
LAT2
NOS3
ZNF609
BSDC1
RAPGEFL1
YTHDC2
FAM83A
IL18
BAIAP2
TMEM41A
RAB26
GOLPH3L
LIPA
KLK11
GRPEL1
IKZF3
TMEM70
SDC4
CCDC200
PRELID3B
CUEDC1
JMJD1C
REEP3
CEBPB
SP4
ABHD10
MLLT6
METTL8
DCAF17
SEMA4B
YES1
FMN1
WDR74
RXRA
RAB1A
TSC22D2
PDXDC1
RABGAP1
MKNK1
TRIM29
SYT8
ZNF587B
TIPARP
HLA-DMA
ZNF561
GDPD5
TPSG1
TPM1
ATF7IP2
PI4K2A
ADD3
DIDO1
GID8
ANXA2R
CD47
ZNF233
HMGA1
MEX3C
NR0B2
TOLLIP
ORC4
MBD5
ANK3
AGBL2
ARL6
TMEM216
KIAA1841
CEP41
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
HIBADH
SLC37A2
NBN
PPP2R3A
YTHDF1
ASS1
PRKD2
PIP4P2
BMF
DUSP22
WDR43
HNRNPD
TMTC2
VWA7
ECI1
LXN
TRAM2
CATSPERG
QRICH1
SLC52A3
VRK2
ROPN1
HNRNPH1
LAMA3
TMEM44
FGFBP3
STAU1
FAM234A
OR9A4
ZFP91
LPXN
GJC2
SLC25A51
PCTP
MTHFD2L
ZNF292
ZNF280D
SLC29A2
SNX18
C1QTNF9
TIMM23B
PARG
TNFAIP8
RAB30
RAD51D
HSD17B12
CDK19
SEC23B
AMD1
BCAS1
MAML1
SSR3
LMAN1
ZNF44
TCEAL1
FAM13A
LRRD1
LUC7L2
FMC1-LUC7L2
FMC1
P3H4
NBL1
MBNL2
RIPK3
CAMK2D
NEK4
PGAP2
PIK3R1
RAVER2
SH3BGRL2
CCDC130
ZNF28
CTNNB1
PSRC1
HEXIM1
SLC1A5
PRKAR1B
RNF144A
RPS7
ANO10
ZNF805
TMEM43
CHCHD4
THG1L
C3orf14
SYPL1
CIZ1
PDE4D
ANKHD1-EIF4EBP3
ANKHD1
UEVLD
MPZL2
FEM1C
SLC24A1
STYK1
SF3A3
ARHGEF2
SPATA12
MST1L
COQ2
SLC25A28
NUDT7
TTBK2
MAPRE2
THAP11
LRP5
ZNF226
MESP1
EVPLL
PLA2G10
BIRC3
ILDR1
WDFY2
RPL24
POF1B
ZCRB1
PPHLN1
LSR
SHOC2
BBIP1
CBR1
ZFAND1
RMND5A
RNF103-CHMP3
PAAF1
COA4
CMPK2
SYS1
FGFRL1
ZHX1-C8orf76
ZHX1
CBFA2T2
STEAP4
MTMR6
ATP6V0A4
PYROXD1
TET3
PCNX3
SERPINA1
PPIG
RNF13
COL18A1
PLPPR2
YPEL3
TTC4
CYRIB
E2F6
LEPROT
LEPR
HEBP1
HGD
ZNF670
WDR62
THAP8
PRKCG
PTGES
JADE1
WDR5B
PLD1
RBIS
TIMM23
TP53I3
KYAT1
LRRC8A
BFSP1
TMEM60
PHTF2
TFB2M
CNST
MAP3K3
ITGA3
ZMYM5
MYG1
CCN5
NABP1
ATP1B1
VIRMA
CCDC150
IMPA2
CDK4
TPP1
CDCA7L
ARHGEF38
AKR1B10
SH2D3C
MEIS2
PPA1
BUB1B
OSBP
YWHAB
PIK3C2B
P2RY1
TPM4
ITGB3BP
EFCAB7
KBTBD2
OLFML2B
DOCK1
EHF
DAB1
OMA1
SLC25A13
COA7
PDLIM7
FLRT3
TPM3
NCEH1
ACP3
HAX1
KRT8
ATP13A4
TMEM59
TCEANC2
SH3YL1
ACP1
MAGOH
MAP3K14
TNFSF10
LDHB
SPACA6
ZNF552
FAM110A
SOD3
TTLL1
FABP6
PPP1R8
METTL21A
PIGW
MYO19
CFLAR
FERMT1
RUSC1
GMPS
HOXB5
SLC10A3
B4GALT2
METAP1
ADCK2
DIRAS2
SLC44A1
SNRPE
YARS2
NDRG1
NDUFA5
SIPA1
VIL1
MRPL44
MRPL40
HIRA
RBM7
C11orf71
RNPEP
RNF39
RABGAP1L
COMMD2
UGCG
C19orf12
DLG2
TMEM126B
FAM83B
RPL27
HMGB1
USPL1
SERBP1
RNF24
SLC5A1
NPNT
MTPN
LUZP6
EPS8L1
SEMA3G
MRPL49
FAU
CMTM4
BRPF3
GTF2H2
SELENOH
EPS8
CAPN13
ZFAT
ADPRHL1
LHX4
SRI
RHOG
TUT1
CFAP69
DHPS
PLEKHB1
ASCC1
ANAPC16
SLC2A11
LAMB3
STX16
TPR
ODR4
ADRM1
PPP1R9A
SQLE
NPAS4
ABLIM1
TTLL5
ERG28
GPR37
SESN1
CEP57L1
TARS1
ISG20
GPBP1L1
TMEM39A
ELF1
WBP4
SPAG4
PKM
FAM200B
SNRNP48
BLCAP
FAN1
C1orf210
CDC73
SRP9
ARID1A
MARK2
TBX3
POLE4
PTPN4
PRRC1
FAM98B
GSN
MRPL34
LIMK1
SGK2
TTLL12
TPK1
GEMIN5
INTS6L
STRBP
FZD4
LGALS4
FAM133B
MET
SSH3
CNGB1
BASP1
SMARCD2
BRPF1
ZNF234
PELI1
MTURN
SERINC2
F2RL1
GFM1
ANTXR2
GOLIM4
PCF11
SNRPB2
GDF5
CEP250
TMEM179B
STPG2
ZBTB45
CHD1L
ZNF138
LYPLA2
WASHC5
NSMCE2
SULT1B1
SPTSSB
CEACAM19
B3GLCT
MAP4K3
CAPG
PRR15L
TMEM65
ATAD2
APEH
R3HCC1L
MSL2
URGCP
TUBD1
RPS6KB1
UBE2D4
MED30
INTS5
PRIMPOL
CASP3
GRK6
CAPS2
ABCD3
PKP1
CCDC33
PPP2R5B
MRPS28
ZNHIT1
PLOD3
DERL1
CEP85
PPP3CA
TMEM134
SLC39A1
RDH16
DDX27
SHF
GPR39
BARX2
EVPL
ATP2C2
TOR1AIP1
RPS20
NMRAL1
HMOX2
TMBIM6
DISP1
OGFOD1
NUDT21
RAD21
IKBKE
IL15
KRI1
TELO2
SEMA3E
FAM227B
DTWD1
EGR2
PHF12
CTDSPL2
C1orf56
GPAT3
ADGRA3
FKBP7
ASPH
PTK6
UBN2
SP2
CSF2
MAIP1
DCP1B
CAMLG
ASXL2
FER
PIGF
CRIPT
ALCAM
WDR11
USP53
TBC1D19
NEK2
SMARCA5
TERF1
ELK1
TMEM184A
ACTR3
PUM2
SIPA1L2
SSBP1
DNAJB12
INKA2
DDX20
TFE3
NARS2
PDE5A
KRIT1
ANKIB1
ZNF112
METTL15
KIF18A
TARM1
CBWD5
CBWD3
CBWD6
PPME1
C2CD3
CSTF2
CEP57
TAF1A
POLN
HAUS3
DENND5B
CADM4
TMEM265
EIF2D
PIK3IP1
MPHOSPH6
EPB41L5
RTCA
ADAM22
MACIR
NCK1
SFTPD
RNF223
CRKL
C11orf49
COMMD6
UCHL3
OSBPL7
ZNF227
EPS8L3
ATR
BTD
PET117
KAT14
SASS6
HACL1
INTS7
DTL
ROPN1B
TBCEL-TECTA
TBCEL
P2RY13
TSGA10
MTBP
MRPL13
THOC5
DR1
PKN2
STARD4
IL1RAP
HSPA8
PLEC
IKBKG
MLEC
ABCC10
STPG1
NIPAL3
ZNF3
UBE2D3
TBC1D23
ZNF652
KMT2A
TRMT5
SLC38A6
RBM39
ST7
SOS1
PLCXD2
MRPL33
GALNT12
MAFG
INSL4
SLC4A10
COPS4
NUTF2
CENPT
CHEK1
GTF3C5
DHTKD1
SEC31A
FAM83D
CLP1
CHMP4C
SLC35C2
ZNF225
HOOK1
CYP3A5
PPP6R1
KRR1
AHCYL2
DDX11
RPL37
RTN4
TTLL4
RAC2
OTULIN
RNF8
UNC5CL
ANKRD54
PDE4DIP
LPCAT4
COPS7B
NFAT5
S100A4
OTUD7B
DCBLD2
MAK
CYP2C18
NSFL1C
GTF2H2C_2
GTF2H2C
TATDN1
NDUFB9
PA2G4
ICE2
PFKFB3
CYB5R3
MRPL45
HARS2
HARS1
SLFN5
FAM120C
EIF5A2
KDM2A
PGRMC2
PLSCR4
C4orf36
SLC39A4
SNIP1
INTS4
CYP2R1
MRPL1
LNPEP
TDG
UTP3
SDHAF3
C2orf15
FAF1
MAD2L1BP
OGA
GTPBP2
AGL
CCDC12
MSANTD4
PEX3
ADAT2
C7orf25
NPAT
ATM
APC
STXBP5
CCDC34
PAPSS1
DACH1
RAB10
RBFOX2
PTGS2
SNAP47
JMJD4
RPS19
TUFT1
TBCE
NFIA
DNAJC10
FMR1
GPAM
ZNF212
CMTR2
SLC35F2
CCR7
DENR
DLD
NUCB2
SQSTM1
MGAT4B
GALK2
CCNI
POLDIP3
GCFC2
ZNF56
EDN1
C2orf73
SDCBP2
PLSCR1
SUGT1
UFD1
CDC45
EEF1AKMT1
CCDC9
ZNF408
ARHGAP1
CEP120
RESF1
STRADA
AMACR
CCDC90B
CCN3
GSDMB
OSGEPL1
DERA
DCTN4
TPD52L2
TAX1BP1
BNIP2
HS3ST1
MAGT1
PROCR
PLA2G4B
C9orf152
TIGD1
EIF4E2
WARS2
CD55
CCPG1
C15orf65
ERAP1
C5orf34
OTUD6B
B3GAT3
FBXO22
ING3
THAP9
ZSCAN26
ACCS
CD46
SORL1
TNFRSF11B
COLEC10
EIF3F
KIF22
ASCC2
DNAAF3
FAM131A
FRA10AC1
ZC3H10
FBXO46
RAB7A
ARID5B
NUDCD1
CARD8
C9orf85
ABHD17B
CDIN1
AURKAIP1
STAT3
ALKBH3
DQX1
GCA
VPS50
HEPACAM2
GTPBP8
KLHL7
RTKN2
CZIB
PPP4C
LAMC2
PPIC
RUVBL1
EEFSEC
THAP10
LRRC49
BTBD8
GSDMD
EHBP1
SRPK1
AQR
KIAA1586
EI24
C6orf226
PCLO
SDR16C5
CDC7
STRAP
MEGF8
SNX12
BCKDHB
PLS1
CCDC30
ZNF772
PLEKHM1
TRMT11
H1-10
KLF8
GBA
SNRPB
CBLL1
FBXO11
LIMA1
ATP5F1E
TBC1D31
ACSS1
GJB4
ZNF684
RNF7
GULP1
ADGRF2
ENKUR
WDR36
USP15
TRMT10C
COQ8B
ADGRG1
DCP1A
CSDE1
CYP51A1
PRDM1
SLC25A45
PRKG2
CDC14B
FAM111A
CAPN5
IL1RN
SIKE1
ZNF354B
RNF144B
CEP295
MPC2
DCAF6
LIG4
ABHD13
PGM2L1
PAFAH2
MIA3
TCERG1
ARIH1
SERPINI1
PDCD10
FAM172A
LRATD2
DCAF1
WDR13
MTF2
EXOC5
AP5M1
TOMM70
LNP1
ALDH3B2
IFIH1
PPIP5K2
TLR5
DSCC1
IFT57
CDYL
BBS10
RPL23A
SCYL2
DEPDC4
LMO7
MAL2
SLC33A1
NR1H3
ACP2
ATL3
RIN2
STAT1
C11orf52
RPF1
METTL7B
RMI1
HNRNPK
ACTA2
MAN2A1
RMDN1
IFRD1
SYNRG
SLC30A6
MFSD8
ABHD18
TCAF1
LONRF3
RPS6KC1
SUCLG1
IQCB1
EAF2
TMEM259
STEAP2
TMEM19
SBDS
ITGB4
KPNA7
KLHL20
SNAPC5
SNX16
MTRNR2L2
MTRNR2L8
NUF2
RBBP5
PAXBP1
DMAP1
ARHGAP39
MED23
NDUFS7
BAAT
NME1
COX16
RPS29
RAB37
ZNF117
YWHAQ
ZNF623
INTS12
GSTCD
TMEM242
ZMPSTE24
DCAF10
DSTYK
SKP2
LMBRD2
ACOX3
TRIP4
ZNF426
ZFP30
STX18
TOP3B
TRMT44
POLR2J3
TTC32
DPY19L4