ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX17826861 | 293
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◣ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MTRNR2L2
MTRNR2L8
WDR74
MTRNR2L9
SNX16
CCDC200
ITGB3BP
EFCAB7
DCP1A
PEX3
ADAT2
NME1
GBA
TEX19
SNAP47
JMJD4
CYP4F11
NDUFS7
TMEM101
ZSCAN22
TMEM242
DRG2
POLR2J3
COPS7B
WDR11
GOLGA3
BRWD1
EIF2D
MRPS31
SMARCD2
TOP3B
INTS12
GSTCD
TXNIP
STX16
UTP3
NR1H3
ACP2
KMT2A
SNRPD3
GUCD1
PAXBP1
PRPSAP1
RBBP5
CASC3
METTL9
CCDC97
NR1H2
HEMK1
DSTYK
TOR1AIP1
RNF187
MED23
GOSR2
SMG8
STAT3
FXN
MRPL39
INO80C
ZNF76
SLC39A3
RBM28
RRP15
CCNG2
RPS7
PSMF1
SPATC1L
HMGB1
USPL1
TATDN3
NSL1
MRPL48
GFI1B
TSC1
ARHGEF1
TSNAX
ZNF335
SELENOW
UBB
SF3A3
MTERF4
MPHOSPH10
MCEE
TEFM
NCBP3
WASHC1
NUF2
CLTC
GTF2H2
TVP23B
TMA16
THEM4
SSBP1
ZNF561
SNRPD1
UBE3B
KCTD10
PRPF18
HEXIM1
NUDCD3
UBC
NKAP
MRPL44
SLC33A1
DUS2
DDX28
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TRIP4
DRAP1
C11orf68
TAF3
NOP16
HIGD2A
LMAN2
STX18
ZNF408
ARHGAP1
ATXN7L2
NVL
SMG7
RTTN
TTC4
ALKBH3
NUP54
VPS25
IPO4
MRPL40
HIRA
NSFL1C
SNX17
EIF2B4
ZBTB45
FRA10AC1
RTEL1
PSMB7
ZMPSTE24
TACO1
RBL1
ZNF839
ZBTB17
SUDS3
GTF3C5
C18orf21
TIGD1
EIF4E2
TIMM22
PPIP5K2
FRG1
ATL3
ANKRD13A
RNF121
LOC100133315
RFXANK
BORCS8-MEF2B
BORCS8
PIGL
KAT6A
TTC26
ZCCHC4
NDUFS3
KBTBD4
C12orf73
KCTD5
EFTUD2
CCDC103
MTF2
EIF1AD
BANF1
DHX40
UQCC1
PREPL
CAMKMT
FAM207A
DDX46
YARS1
S100PBP
VPS33A
DMAP1
DNAJB12
TRDMT1
BMS1
HUS1
HNRNPA1L2
VPS45
PAFAH2
REXO4
MRPS23
MAN2C1
TBC1D13
DPY19L4
EIF3F
MCOLN1
PPP6R1
PCDH9
NDUFB3
FAM126B
TRUB2
COQ4
KDM1A
VPS13B
MRPL16
CGGBP1
C3orf38
UBQLN1
SEC13
BANP
PRRG2
NOSIP
MRPL58
TOMM22
CDK5RAP1
FBXO22
MTIF2
SLC39A6
ELP2
HINT3
DCAF10
ATR
EIF2B3
SF3A1
CCDC157
BICD2
HSPE1-MOB4
HSPE1
HSPD1
STMP1
EDC4
DPP9
CCNC
COX16
ZBTB40
AGK
ZSCAN12
TARS2
LTN1
DUS1L
GTF2H2C_2
GTF2H2C
LRRC59
PPP5D1
CALM3
KCNJ15
YPEL3
BSDC1
DUSP6
ZNF562
PDE11A
RABGAP1
CBX1
FEM1C
AURKAIP1
LUC7L2
FMC1-LUC7L2
SAMD4B
PUM1
ARHGAP39
FAAH
BAAT
TTLL12
CCDC130
CEP85
RPS29
TMEM41A
RAB37
ZNF117
CEP72
YWHAQ
ACYP2
ZNF623
RPL27
PPIG
FMC1
JMJD1C
MAPRE2
GDPGP1
CIB1
POLE4
NPAS4
RABGAP1L
NOS3
SKP2
LMBRD2
FAM227B
DTWD1
ACOX3
TBC1D19
ZNF426
ZFP30
SELENOH
TMEM70
SLC24A1
TRMT44
TTC32
PRELID3B
RPL37
ATP1A1
COMMD2
DNAJC25-GNG10
DNAJC25
POLR3B
CLK4
GSTA4
METTL25
CCDC59
ALG10B
TFPT
PRPF31
YTHDC2
RERE
SLC25A51
SLC44A1
RBBP9
CAT
GTF3C3
RPS14
SFT2D3
REEP3
ANKRD54
RAD54L2
GTF2H4
INTS5
VTA1
NMBR
EPS8
ATF7IP2
BCAR3
LSG1
SUPT7L
SLC4A1AP
GOLM2
HTR5A
ITGA4
CAMK1D
SNIP1
C3orf14
ZNF829
ZNF568
TDP2
ACOT13
RILP
NEMF
SCAND1
USP30
KDM3A
ORC4
MBD5
NBN
TMEM43
CHCHD4
MRPL21
IGHMBP2
ZNF391
TMEM222
ILF2
FGFBP3
ATP5MC2
KANSL3
SLC29A2
WDR36
ZNF540
SAR1B
MOB4
MRPS18C
HELQ
FAM133B
MRPL1
ZNF571
WDR43
AKAP10
KLHL20
GALK2
ZNF226
C17orf75
IST1
SCNM1
LYSMD1
POLR3E
PDE4DIP
GTPBP3
CD47
TMEM68
TGS1
MMP7
KIAA1549
GFM2
CPPED1
TUT1
GABPB2
WDR55
COPS4
DDX18
CTNNB1
BTD
SMG5
BNIP1
CHD1L
SNRPB
MAIP1
RUVBL1
GRPEL2
OTUD7A
ATF7IP
TTI2
RPS20
RAB30
CBWD5
TPR
ODR4
ZSCAN25
STAU1
ZNF609
POLG
CFAP298-TCP10L
CFAP298
TPM1
DCLRE1B
AP4B1
C8orf37
NCOA7
CBWD3
MNAT1
FAM228B
B4GALT7
NOTCH2
ADRM1
SLTM
KLHDC9
MRPL30
MITD1
RMND1
ARMT1
TSGA10
ADPRS
SLC39A13
HNRNPD
EPRS1
EIF3E
TPK1
SF3B6
COX7A2
GMPS
PSRC1
THAP11
PSMD6
CCAR2
MTBP
MRPL13
CCNI
SUGCT
MPLKIP
SDHAF3
BRF2
TSFM
SLC35A3
PSMD3
LOC102724265
ING2
COPS2
MED18
PHIP
TIPARP
DEFB124
PIGW
MYO19
PARP2
NAA20
OPA1
CENPV
SMU1
CDC73
TGFBR2
ZSCAN31
MRPL3
BCL9
CYP17A1
SNRPB2
MTR
PLEKHM3
SRRM3
EXO5
TRMT2A
RANBP1
CLTB
GORASP2
NECAP2
N4BP2L2
TTLL1
VIRMA
MLEC
CRKL
SACM1L
FAM98B
CLUAP1
TRMT5
SLC38A6
AARS2
CBWD6
ZNF280D
RBM45
RAB18
SESN1
RPL26L1
TTC13
PRKAB2
ARV1
CDK19
HAX1
ZNF292
ZSCAN30
SNRPE
PIP4P2
MAGOH
R3HCC1
LRP6
COA6
RPS15
C2orf15
PIH1D2
NKAPD1
STOML2
WWOX
MRPS14
U2SURP
ALG10
INO80B
ANKRD40
ANXA2
C10orf88
CALCRL
CEP120
PDCD6IP
RPL5
STX6
SEC23B
CEP57L1
SMIM13
NFAT5
SUGT1
GSPT1
KMT2D
CEP85L
CCDC88A
DDX1
NOXA1
GABPA
ATP5PF
HLA-E
DGKZ
CASS4
ACTL8
NMNAT1
LZIC
RNF6
PPP2R5B
NDFIP1
FAM234A
PRIM2
MAPK1IP1L
IQSEC3
KRR1
DHX16
ZZZ3
MEMO1
NBPF1
CCDC150
ITGAL
ATG101
PUS10
PEX13
ZNF165
MRPS33
RNF125
YTHDF2
AAR2
PTPN4
PRMT5
WDFY1
TRAM1
TMEM65
GNB2
CDIPT
LRRC37A3
RPS19
GLIPR1L2
DHTKD1
SOD2
NUP107
MRPL19
MED4
MTMR6
PCBP2
RPS3A
SDCCAG8
CEP170
TMEM259
GPAM
TBL1X
ZNF3
DNAJC11
LTA4H
SLC35B1
TMED1
RFX7
TARS3
SLC9A1
CPLX2
SRP9
ZNF846
XKR7
COG2
ERCC6L2
ATG4C
GEMIN7
INTS4
RESF1
WDR70
RPS26
RCAN1
SETD1A
CDK12
RABGGTA
CRBN
INKA2
DDX20
RPL38
C11orf49
RALBP1
GARS1
LNPEP
SET
ATAD2
PRAME
CYB561D1
RAB5C
ATG5
P3H4
ATP5MC3
ACBD6
RIF1
MTOR
FAM160B1
RAP2C
FAM13A
FAIM
AMD1
SENP1
PFKM
MRPS15
ZNF770
HIBADH
ZMYM5
C2CD5
FOXJ3
PPIL3
NIF3L1
PHF21A
DCT
KNL1
LIPA
PPP6C
ABCG1
STC1
ASNS
ZNF527
EEA1
YBEY
MCM3AP
ZNF341
TM9SF4
METTL26
HEATR1
CCDC174
ANO8
MEX3C
VWA8
DNAJC24
DCDC1
FABP6
TSPAN10
NPLOC4
MAN2A1
PPP1R11
NMRAL1
HMOX2
ZER1
TMBIM6
INTS2
WTAP
ALG14
KDM3B
CREM
CFAP20
VRK2
MAPKBP1
CIZ1
RWDD1
ZNF827
ATP5MPL
RHOT2
CHMP7
NSUN4
STRADA
SREK1IP1
CWC27
ANKRD36
PPIH
MMACHC
RAD52
MAD1L1
SH2B1
CCDC107
RBIS
ARMH3
MKRN2
TRMT61B
TNPO3
SECISBP2L
RBSN
SELENOT
NEK4
IPO13
ZNF529
NARS1
ARL8B
DISP1
QRICH1
CBR1
WDR31
TMBIM1
METAP1D
LARS2
UCHL5
RO60
TMEM167B
NOL11
PLEKHM1
PET117
KAT14
ABCA3
LRRC29
SLC30A6
HNRNPH1
BAIAP2
DDX41
TRAF6
RAG1
CSTF2T
RPL29
UIMC1
ZC3HC1
RSAD1
RETSAT
ELMOD3
MRPL42
MEGF8
HDAC1
DCP1B
ABLIM1
CLUL1
ISY1-RAB43
ISY1
THOC5
SMIM12
DPYD
DHX8
RUNX2
WDPCP
TRAM2
MDH1
FBXW7
ALDH9A1
AASDH
SEC31A
DDX27
STXBP3
CUL5
ZC3H6
GOT2
POLDIP3
RCOR3
GDPD5
NOL12
COIL
SFSWAP
DHRS13
MFSD8
ABHD18
PTPRCAP
GOSR1
PHB2
WARS2
ZNF518A
CALM1
TBC1D22A
METAP1
NDUFC2-KCTD14
NDUFC2
ADAR
NDUFAB1
AGGF1
PRRC2B
POLR1F
UFD1
CDC45
ANXA2R
PRMT3
PLK3
FKBP5
MIER1
ZNF398
SIRT4
ZNF286A
METTL8
DCAF17
PARK7
UBE2L3
SNX19
PPP1R8
ZKSCAN2
PSTPIP1
CELF1
ZNF212
DAB1
SYPL1
GCFC2
SPHK2
RPL18
UBE2D3
YJU2
TRIM41
HECTD1
PES1
SCP2
PSMA1
MRPL45
EIF1B
THG1L
TNRC6B
BMT2
ZNF350
OGT
TNFAIP8L1
MIGA1
TMEM30A
SASS6
NUDT15
ZNF461
ASF1A
MRPL38
STAT6
EIF4A2
SLC25A53
S100A4
CLPTM1
ZDHHC6
VTI1A
CDKN2AIPNL
HES3
WDR47
SLC38A2
SPATA13
WDR24
SIRT6
ANKRD24
ADNP
LIG4
FIS1
APEH
ZNF331
STAT1
PDCD2
NDUFA4
KCNH1
GFM1
AP1G1
RPL26
PDE8A
C7orf26
SERBP1
ZNF585A
EEFSEC
NFE2L2
CCNL1
THOC3
RAB11A
FUT10
TBL3
EXOC2
FGD3
PPRC1
GTPBP10
TMTC2
PSMD11
RPL22
VPS13D
LZTR1
ZNF570
TADA1
FNTB
TMED2
ANKRD36C
AHCYL1
PPA2
GTF2B
ARL14EP
ZNF25
VPS72
GK5
HDAC2
EIF5A2
TRNAU1AP
ING3
CRLF3
NUP214
NDUFA6
ZNF302
KANSL1
PSMG1
MAML1
ZZEF1
CYB5D2
RGPD1
CALM2
NCOA3
HARS2
HARS1
OSGEPL1
PIK3R1
CYREN
ZBTB20
ZNF569
ZNF510
SRSF11
CLASP2
CEP41
CSDE1
YAP1
TTC14
TBPL1
RANBP2
ABHD13
BRIX1
MTRES1
SCYL3
ANGEL1
RPS12
OTUD7B
HIF1AN
KDM5C
MGST3
C18orf25
APRT
RINT1
C19orf48
CYP20A1
KLHDC10
NUTF2
CENPT
ZNF383
POLR3A
PIKFYVE
VAMP4
H4C8
LANCL2
INO80D
ST6GAL1
RABEP1
ELOVL2
YWHAB
SNX5
MGME1
GNAL
MKNK1
USP3
USP15
RPA2
ARAP1
WASHC2C
CYP4V2
SYT7
YARS2
CLPB
UGCG
ZNHIT6
EIF2S1
ATP6V1D
ZNF44
RPL6
SRFBP1
ADAM22
PSMB2
PCID2
CUL4A
RHOT1
HMGN4
AQR
BRPF1
GDAP1