ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX150666 | U2OS
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◣ SRX150666: U2OS

◢ TRIM28: STRING

CCDC200
MAPRE2
ITGB3BP
EFCAB7
MTRNR2L8
BSDC1
KCNJ15
SUPT7L
SLC4A1AP
WDR74
ZNF408
ARHGAP1
KDM3A
ATF7IP
TARS2
RPL27
GABPB2
RCAN1
SF3A3
COL4A6
COL4A5
COX16
MTRNR2L2
PPP6R1
MMACHC
SMG5
NDUFB3
FAM126B
COX7A2
CDIPT
NME1
PIH1D2
NKAPD1
COPS4
AURKAIP1
INTS5
MTF2
RPS26
HDAC8
TUT1
PRPSAP1
CLPTM1
RBBP5
LY6K
DNAJC16
MED18
RPS7
AHCYL1
TBL1X
SMG8
RABGAP1
EIF2S1
ATP6V1D
DHX16
ZNF806
ARHGAP39
STAT3
CALCRL
KDM5C
SLFN12
INO80B
SLC33A1
SELENOH
SLC9A1
STC1
TCTEX1D4
BTBD19
ZNF226
HAX1
RFFL
AIFM1
UBB
PAXBP1
CCNI
EIF3F
GPC6
CELF1
CDK12
RGPD1
RGPD2
ZNF540
ZNF571
GTPBP3
ZDHHC6
VTI1A
WDR83OS
WDR83
RMND1
ARMT1
MTBP
MRPL13
KDM1A
STK40
IFTAP
DUSP6
GTF2H4
PSMB7
ABRACL
THG1L
ARMCX5-GPRASP2
ARMCX5
IGFL4
SSBP1
ZMPSTE24
PPIL3
NIF3L1
ILF2
PACSIN2
PDE4DIP
RCAN2
LRIG2
RPH3AL
PPIP5K2
REXO4
PLEKHG1
ZNF331
RNF125
ZNF585B
ALG14
UTP3
TTC26
ISY1-RAB43
ISY1
RPL38
NOL12
MICALL1
DNAJC25-GNG10
DNAJC25
CCDC174
AP1G1
MRPL11
TFB1M
IL17F
ZNF56
DDX41
MRPS23
VTA1
NMBR
EFHD1
TRIM5
YWHAQ
RAD51AP1
C12orf4
C1orf174
KAZN
EIF5A
GBA
DNAJB12
RPA2
ZNF383
ZNF790
UQCRC2
TMEM242
SYAP1
PPRC1
CSNK1E
UFC1
ZNF165
ZW10
B4GALT3
FAM124B
MRPL30
MITD1
RPL11
PIKFYVE
C3AR1
NEMF
TMEM101
ARMC1
TRMO
PES1
YPEL3
TIMM10
TRUB2
COQ4
TOMM40
LRP6
FRRS1
CASP10
BNIP1
SCARB1
IFI6
UBE3B
KCTD10
RNF207
TBC1D19
RBM25
FAAP20
MED11
TFPT
PRPF31
SNX17
EIF2B4
PEX3
ADAT2
GTF3C3
DPP9
PDE12
HEATR1
GPATCH3
ZRANB2
ADRA1A
MAST2
LSG1
SLC25A53
NR1H3
ACP2
RAB30
INKA2
DDX20
ZNF461
SIN3B
KANSL3
TNPO3
PLK3
POLR3A
VPS52
RPS18
SLC35B1
SNRPB
RERE
PSMD3
YJU2
IPO4
UFD1
CDC45
ZNF585A
PAFAH2
MTR
SLC39A9
ERH
PCNP
MDM4
RABGAP1L
EIF3E
HEMK1
TIMM22
ALG10B
RUVBL1
ZNF510
POLR1H
ZNF335
CDK5RAP1
DDX18
CHMP7
ANKRD13C
MAN1C1
COMMD2
TEFM
EPRS1
PIGL
CCNC
SPHK2
RPL18
TM2D1
SULT1C2
NEURL4
SNRPD1
CEP120
CLASP2
PREPL
CAMKMT
GYPC
ATP5MC2
CCDC97
FRA10AC1
COIL
TTC14
NOL8
CENPP
ZNF221
TTI2
AASDH
PHF5A
ACO2
ZBTB40
POLG
SMIM12
FBXW7
DDX42
CCDC47
DHX8
FAF1
TMEM259
NEK2
KAT7
TTC32
PSMB6
LURAP1
SEC16B
DMAP1
USO1
NUF2
MED23
SESN1
CEP57L1
AKR1A1
DYNLRB2
SLITRK5
SLC1A3
IPO13
RPL26
ACBD4
SH2D5
RBL1
CREM
TIMM9
KIAA0586
TBC1D9
BANP
NBPF1
CMSS1
SRSF1
BAIAP2
OAZ3
LYPLA2
ZNF2
TUFT1
KCTD20
SCP2
TRAPPC8
ZNF260
METTL25
CCDC59
MRPL1
PCBP2
ANKRD17
AAAS
PDSS2
GTF2B
GALM
INTS2
KIAA0319
TMEM128
LACTBL1
GLIPR1L2
ARL14EP
PEAK1
HMG20A
EFCAB14
ZNF793
WDR11
MRPS33
MRPS15
CCDC107
GOSR1
KDM8
JMJD1C
MOB4
NCOA7
KRR1
DBF4B
ZNF484
RTTN
SREK1IP1
CWC27
FDXACB1
C11orf1
HIRIP3
RPL37A
CLN3
UIMC1
CZIB
KIF2C
ZBTB45
NR1H2
RFXANK
BORCS8-MEF2B
BORCS8
TTLL12
CDK19
C11orf49
AMD1
WDPCP
MDH1
PHB2
PPIH
CDC5L
SUGP1
MAU2
UQCRH
LRRC41
SNIP1
OSBPL8
PRRG2
NOSIP
IRF9
ZBTB8OS
RBBP4
C19orf48
EIF3D
AJUBA
INTS4
SH2B1
TM9SF4
MRPL45
DNAJB4
FUBP1
SUGCT
MPLKIP
NRDE2
GABARAPL1
NME7
BLZF1
BRF2
ATG4C
SF3A1
CCDC157
WDR36
ZSCAN30
SMARCD1
PDE7B
TNFAIP1
IFT20
UTP11
CORO2A
LIMA1
INO80C
CYB5R4
RSPH3
COASY
TMEM30A
PRKCI
MTRNR2L10
GABPA
ATP5PF
TRMT1
MRPS18C
HELQ
NOP16
HIGD2A
ABCD2
GPX1
ZSCAN4
TPK1
CSTF2T
PSMD9
HPD
SLC35A4
APBB3
DMAC2
MED16
CES3
ZNF302
SF3B5
TIMM50
WASF2
CALCB
TBX18
MNAT1
STARD10
ZNF350
DNM2
ATP5MC3
LMNTD1
SCNM1
LYSMD1
ZNHIT3
CHST4
ETFBKMT
UBQLN4
LAMTOR2
GFM2
HAUS4
TSFM
SOD2
DCT
WTAP
NEK4
SIRT4
POC1B-GALNT4
POC1B
WDR5B
FBXW10
C8orf37
MVB12A
TMEM41B
ADPRS
AAR2
CYB561D1
CRADD
KXD1
MBNL2
NOL11
SCYL3
UBQLN1
DCTPP1
FOXO3B
SLC25A44
NUP54
CGGBP1
PRKCSH
CCDC151
C3orf38
ACTR6
RC3H2
BPNT1
TMBIM1
RUFY3
NDUFS7
TMED1
EIF4A2
ZNF570
ZNF569
RBM8A
CEP162
SFSWAP
SRFBP1
HBS1L
FGD4
S100A13
SRRM1
KIF20A
BRD8
S100A1
NHS
BORCS7
RCC1
ZNF48
PLPP5
USF1
CPN2
TCIM
RPS29
FAM13A
STAT6
NRL
DCAF11
TRMT11
SLC7A11
ZMYM6
CCDC130
CFAP298-TCP10L
CFAP298
RPL22
CCNT1
POGLUT3
GSTA4
QRICH1
ZFC3H1
THAP2
MZT1
BORA
SLC35A1
TAF15
CAND1
WDR55
MRPL48
NECAP2
ZNF613
SLC35E2A
SEPHS2
SULT2A1
LTA4H
SLC30A6
ZNF791
ZNF490
GTPBP2
OBSL1
INHA
SLC39A6
ELP2
TAF13
PSME3
INSYN2B
HEXIM1
FNTB
SNU13
ATAD5
CD2BP2
RAI14
SNX12
RPL7L1
AARSD1
CNPY2
GCNT2
FCRLA
CDRT1
THOC5
LZTR1
RPS12
YARS2
GPN3
FAM216A
UBR2
TXN2
SIAH1
ENDOV
TBC1D22A
GOSR2
COPS7A
NPAS4
ADRM1
RPS3A
RIF1
LRRC29
PLS1
CREBL2
CACTIN
NECAP1
MSANTD3
PMF1-BGLAP
PMF1
MTOR
ZNF566
ZNF300
ZNF573
HTR3A
C4orf51
DSTYK
DRG2
GORASP2
U2SURP
XPNPEP3
ST13
ACBD5
POLR2J3
DDX46
HAUS6
LRP10
GPX8
ELSPBP1
TTC39A
RTCB
PUS10
PEX13
RWDD1
CALM2
DEDD
SLC18B1
PIK3CB
CDCA3
ARHGEF10L
MAIP1
DNAJC11
TAS1R1
NOL9
SRSF4
ARHGAP9
MARS1
DYNC1I2
MAP3K7
RPS27A
CLHC1
TATDN3
NSL1
GTF3C5
DYNC2I2
PLEKHG2
NXT2
HMGB1
USPL1
YTHDF2
C2CD5
CFAP20
MEGF8
DHRS13
ADGRL1
GABARAP
RPAIN
NUP88
SMG7
ZSCAN22
UTP25
PSMD8
TENT2
TPGS1
PNISR
PHF12
CLCN3
SH2D3C
ZNF175
RUFY4
RPL29
GNAL
UBOX5
FASTKD5
TRIM46
KRTCAP2
TTC5
ATP2C1
NOLC1
AMPD3
FNIP2
LUC7L2
FMC1-LUC7L2
FMC1
BAG6
APOM
CLASP1
TXNDC17
KIAA0753
ADIPOR1
SIRT3
PSMD13
PKDCC
OSGEPL1
NSUN3
DHFR2
POC5
GRWD1
ERAL1
ZNF623
ZNF391
CUL2
ZNF416
ELAC2
SRP54
CHD8
OS9
SNRPG
SLC35E4
RBM45
CCDC90B
PUM3
EFTUD2
CCDC103
SNX3
TNFRSF19
ARHGAP24
MTREX
DHX29
SULT1C4
FUCA1
C6orf118
TMBIM6
POLDIP3
ZNF180
MRPL27
EME1
SLITRK1
TACO1
PRPF18
FAM228B
SF3B6
RANBP2
ATP6V0D1
BCL2L13
THRAP3
TTC31
CCDC142
HACD2
ACP3
ZFYVE26
SEMA5B
CEP85L
NSUN4
ZKSCAN2
CCNG2
CCDC43
ORAI3
CD320
ZFP30
COPS7B
MTRNR2L9
CCAR2
NIP7
COG8
PDCD6
EYA3
NOCT
GTSE1
PDE6D
FAM135A
GRN
SH3BP4
GALK2
COPS2
FAM234A
MRPL19
UBE2Q1
ABCF2-H2BE1
ABCF2
AP2S1
COA3
CNTD1
POLD4
EIF1AD
BANF1
CRKL
CLUAP1
RNF220
TMEM69
SLC35D1
TIPRL
SCAND1
NUP107
DCP1B
CABIN1
PRCC
MRPL24
FKBP8
SLC39A11
SBNO1
SLC35F2
MGRN1
GPRC5A
CLTC
TMEM167B
CENPF
DYRK4
TBCB
POLR2I
TBC1D2
NKX3-2
ZNF829
ZNF568
COA6
ZNF286A
MRPL54
ACVR1
APBA3
HECTD3
NUP35
ILF3
RPL18A
MPDU1
LOC100996842
PIP4P1
IFIT3
CALHM5
TRMT5
SLC38A6
ANXA11
NKAP
APOL2
ALDOA
RRBP1
TMEM63C
LOC644090
LIN54
ACSL1
DNAL1
STX12
F2RL2
ARL14EPL
MAN2C1
METTL18
C1orf112
LMAN2
VPS45
CUL3
RIOK2
SYCP2L
TSR1
SGSM2
CSRNP3
RHNO1
FOXM1
TRIP4
C18orf21
MAGOH
ZNF529
ZNF582
STRIP1
ZNF700
DCLRE1C
PYROXD2
TRMT112
PRDX5
TMX1
DNAJA3
TBC1D1
TMEM102
PRSS23
CELF3
DNAJC12
KLKB1
NGDN
HIBCH
MAD2L1BP
CMPK1
ERLIN1
RFC1
PSMB5
MDH1B
FASTKD2
PPIG
HSPE1-MOB4
HSPE1
HSPD1
SENP1
PFKM
USP9X
RBMS3
FIG4
AK9
ZSCAN23
CHM
ADGRF2
HOXB13
BTRC
SPIDR
SUPV3L1
PTPA
CRAT
BRCA1
NFE2L1
MTIF2
CBR1
CRNKL1
CFAP61
CACYBP
ZNF565
ZNF146
OXA1L
EFR3B
USP48
DDOST
KLRC2
VIRMA
ZBTB20
TOMM22
MPHOSPH10
MCEE
TAF12
ING4
SPAG9
UBE2Z
ZNF14
NAPA
YLPM1
SCN11A
C11orf65
NDUFA9
AKAP3
WDR48
PNO1
THAP3
PIP5KL1
ADGRF4
FGFBP3
PHIP
VPS13B
SNRPD3
GUCD1
RGL2
PCNX3
ZNF24
PMVK
MPC2
DCAF6
COQ10B
MAP3K11
PKD1L2
SNAP47
JMJD4
NAT10
GPR137
TRIP12
FBXO36
IWS1
ZDHHC12
AGPAT4
NUCB1
EPHA7
EEF2K
PDK2
CDK7
PKIG
FLRT3
TNFRSF9
STX18
SDHAF3
RPL5
ATG101
RPS19
HIF1AN
TAF5
NUP205
DDX21
TRIM2
ATAD3A
EXOSC5
BCKDHA
PIH1D1
NOL6
CPPED1
METTL26
CSTF1
AURKA
RAB3GAP2
MFN2
PDE4B
MTRNR2L6
TPR
ODR4
EXO5
N4BP2L2
PPOX
RANGAP1
KCTD9
CDCA2
NUCKS1
OGA
MICOS13
HSD11B1L
PAK1IP1
C6orf52
NAA38