ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1799522 | CD4+ T cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◣ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
SNX16
ZNF562
YPEL3
ZNF426
GBA
POLR3E
AKAP10
POLG
ACYP2
ILF2
B4GAT1
CEP85
DPP9
PRMT5
DUSP6
KNL1
SACM1L
FAAH
ZNF839
ZNF561
CEP72
HSPA6
WDR74
BCAR3
LTA4H
METTL26
TIA1
NCOA7
RAB11A
H4C8
GOLM2
PAXBP1
LUC7L2
FMC1-LUC7L2
FMC1
BAAT
STX16
PSMB3
COX16
C8orf37
INTS12
GSTCD
EPS8
FEM1C
ABCG1
SHF
DCAF10
KLF14
ALOXE3
RAE1
MRPL44
PPEF1
CCDC200
ELF1
WBP4
KLHDC9
YWHAQ
GSTA4
DMAP1
ANG
RNASE4
ANKRD54
FBXO31
PASD1
ZNF827
NOD1
ANXA2
CYP4F11
STX18
RAD54L2
ZNF529
ZNF382
IL1R1
COMMD2
ITGA4
PPP6R3
RTL6
ZNF117
GTF2H2C_2
GTF2H2C
DCT
PUM1
ARHGAP39
NDUFS7
DUS1L
STX6
PCDHGB6
POLE4
MRPL21
IGHMBP2
C17orf75
WDR24
ZNF623
BCL9
GNL3L
NUF2
NME1
TOP3B
GTF2H2
IL2RB
MED23
FRA10AC1
ING2
TRIM41
HMGN4
SLITRK3
RCC1
DCP1A
RPS7
DPY19L4
ACOX3
TRMT44
GSPT1
HERC6
ALG10B
C12orf57
SET
DEFB124
PEX3
ADAT2
OTUD7A
NOS3
ZFP30
TMTC2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
ZNF605
GTF3C3
IPO4
ZNF391
PTPRCAP
NCOA3
DUSP4
RBPJ
KMT2A
FAIM
STAT6
RPS29
MLEC
POLR3B
GALK2
COPS2
RBBP5
RIPOR2
KAT6B
DRAP1
C11orf68
COPS7B
BCL9L
GEMIN7
SLC8A1
CDK1
FRG1
CASC3
NPAS4
CD47
BTD
ACTL8
PRELID3B
CLK4
SLC39A13
ALKBH3
DLEC1
MRPS18C
HELQ
SPATA13
S100A4
USP30
NOXA1
MTF2
ANKRD40
SSBP1
EIF2D
PLEKHM3
TACO1
PAFAH2
AAR2
DLK2
ZMPSTE24
KIF27
HMGB1
USPL1
LNPEP
ENDOG
TRMT61B
BSDC1
CBX1
AURKAIP1
LASP1
TBC1D19
CRLF3
RPS20
RBSN
DNAJC25-GNG10
DNAJC25
SELENOT
PARP1
RNF146
RPL27
AGK
EIF1AD
BANF1
GTF3C5
GDPD5
PCID2
CUL4A
ITGB3BP
EFCAB7
INO80C
TGFBR2
KANSL3
SF3A3
ZNF408
ARHGAP1
JAML
FAM207A
ZNF44
FOLR3
TFPT
PRPF31
HOXC5
SMARCD2
RESF1
SLC24A1
RPL37
GTPBP3
MRPL16
ANO8
TOR1AIP1
TMEM43
CHCHD4
KIAA1549
PCDHGB7
PHF21A
DRG2
MNAT1
DDX1
KMT2D
STOML2
RFX7
ZNF737
WDR43
CPPED1
CLUL1
SELENOH
TDP2
ACOT13
SAR1B
ZCCHC4
TMEM242
FAM227B
DTWD1
DSTYK
ADRM1
PARP2
WDR36
BMS1
MAN2A1
SUZ12
TMEM222
CFAP298-TCP10L
CFAP298
EPS15
ADD2
IQSEC3
STRADA
H2BU1
H2AW
RABEP1
SNRPD3
GUCD1
YBEY
MCM3AP
SUGT1
YAP1
C11orf49
TIPARP
LSG1
TSFM
DHX33
SARAF
TEFM
ZBTB45
PCDHGA3
CFAP69
PPM1A
PSMD3
ATF7IP2
TPGS1
SNRPB2
HDAC1
ZNF350
C3orf86
SETD1A
RALBP1
PSMG3
ZNF808
TMEM41A
CCDC97
BNIP1
ZNF570
ZNF569
SNIP1
CDK5RAP1
PCDHGB5
TRIP4
DGKZ
NAB1
POLDIP3
SIRT6
ANKRD24
ELOVL2
ZNF579
ZNF606
ZNF518A
VPS36
RRM2B
CTNNB1
TMEM65
PSMF1
UBAP2L
C1orf43
CASS4
TVP23B
DLX3
EIF3E
SMG7
CD5
LOC102724265
TMEM259
MRPL19
LIG4
ABHD13
ZNF28
RTTN
ZNF846
PIGW
MYO19
SDCCAG8
CEP170
TMEM183A
OSBPL8
GDPGP1
CIB1
PGK1
TTC26
MED18
ERCC6L2
KAT6A
ZER1
SNAPC3
CTSC
ATP6V0E1
NSFL1C
RMND1
ARMT1
ADPRS
STAT3
MED16
SLC25A51
MRPL30
MITD1
AGGF1
PRKAG2
ZCCHC3
SEMA4D
NDFIP1
PRSS27
TNFSF8
RAPGEF2
GPAM
METTL9
ZNF280D
PCBP2
SECISBP2L
KCTD5
FITM2
MRPL3
MRPL58
NFAT5
PHB2
ARHGAP31
CCNC
NFE2L2
RARS1
PTPN22
NBN
INKA2
DDX20
ORC4
MBD5
NOTCH2
CYB561D1
MAPK1
GABPB1
ZNF234
ATR
ABCA3
YTHDF2
WDR47
PDCD2
NDUFA6
UBE2G1
RFX2
ZMYM1
RPS14
OTUD7B
USP3
SNX1
KPNB1
ZNF781
GTF2B
PDE11A
WDFY1
MAD1L1
EXOC2
CCDC77
KDM5A
ZNF879
VWA7
FGF9
MRPS31
CRKL
RUNX2
MAF1
FAM50B
TRAPPC12
METTL25
CCDC59
SMN2
SMN1
TUBA1B
VTA1
NMBR
MRPL40
HIRA
RABGGTA
SENP1
PFKM
AP1S2
BRWD3
SMAP2
ZC3HC1
FIS1
NDUFA4
LRCH1
ADGRE5
KDM3B
NINJ2
ANKRD13D
RBM45
MEX3C
PDE8A
ABL1
UTP3
CABIN1
PPIG
GFM2
NDUFC2-KCTD14
NDUFC2
VPS13D
TAB1
TPD52L1
SRRM3
FAM98B
GNB2
LRRC37A3
PCYOX1
ZNF501
MBTPS2
ZNF24
PIK3R2
RNF122
MTERF4
LRP6
ZNF770
CEP41
JRK
RPL31
ZBTB40
SMG5
PHIP
C2CD5
ZNF341
NARS1
SMG6
RNF144A
SERF2
ELL3
RUNX1
NSD3
NDUFS3
KBTBD4
OGT
ITGB1BP1
CPSF3
RNF139
FAM221A
CHD1L
CBWD5
CBWD3
EXO5
CBWD6
PRKAB2
GNAL
BOD1L1
COA6
ZNF461
ZNF585A
SCNM1
LYSMD1
RPS3A
TDRD7
BOLL
KRTAP4-6
RABGAP1
MTBP
MRPL13
HNRNPA1L2
GLIPR1L2
MTERF1
ZNF554
MTRF1
NAA16
HTR5A
HUS1
PPA2
ZNF549
INO80D
TIGD6
HMGXB3
ACBD6
GAPVD1
CCDC114
MED13
RAB37
NCBP3
CPLX2
VPS72
COMMD1
RPL5
RAB5C
TNFAIP8L1
TAF7
REX1BD
KMT5B
BATF
TATDN3
NSL1
CLTC
ZC3H6
ADAR
MTIF3
ZSCAN31
MARCHF7
COG3
SS18
FOXJ3
CREM
MAPKBP1
PET117
KAT14
ANO10
ABHD5
AZIN1
TMED2
CITED2
NUTM1
NOP10
SLC44A1
MRPL39
RHOT2
NXPH3
DOK2
KLHL20
ZSCAN12
EFCAB2
PARP6
WDR31
STXBP3
DNAJC14
H4C14
H4C15
MORF4L1
SLC29A3
TMA16
SMARCC2
B3GLCT
CFLAR
RIPK1
PPP3CB
PPIF
MTOR
TRAM2
ZNF331
SNX5
MGME1
ZBED5
ZNF829
ZNF568
MOB4
GOLGA3
ZNF786
FAM133B
MKRN2
PEMT
SF3A2
PLEKHJ1
SEC13
NSMCE4A
RSRC1
MRPS2
C9orf116
TOB2
DDX18
MAN2C1
SMU1
ZNF599
WASF2
MAML2
MRPS23
MRPL48
RNF6
NUTF2
CENPT
VPS29
RAD9B
ZFP14
CCAR2
CFAP20
ASF1A
CALM2
ELP1
ABITRAM
SECISBP2
CDC25C
FAM53C
EMSY
SLFN13
SKP2
LMBRD2
ASNS
CYP20A1
NDUFAF5
ESF1
SPRYD4
NKAP
B3GALNT2
C9orf40
PPME1
C2CD3
HLA-E
TRAM1
BACH2
AGO3
SMARCC1
ZNF239
MRPL1
WARS2
YARS1
S100PBP
ARID1A
TTLL4
LRG1
FBXO22
ATG4C
UCHL5
RO60
ADNP
PLCL2
WDR41
TOMM5
RNF13
MMADHC
CSRNP1
FBXW2
MAT2B
ZBED4
XCR1
NFKB1
VPS37C
MS4A6E
U2SURP
NGDN
CIAO3
RPN1
SFT2D3
FAR1
PCM1
ZNF91
EIF4A3
SLC25A35
EP300
TIGD1
EIF4E2
RNF125
TRDMT1
COQ2
ZNF805
MAP3K4
FZD9
UBE3D
TMEM63B
MRPL14
INTS5
DCLRE1B
AP4B1
STAMBPL1
CTTN
ARHGAP25
SLTM
CDK19
HNRNPA3
SCAND1
APEH
MTX2
KBTBD6
LPAR6
RGPD5
RGPD6
RGPD8
DCTD
ARHGAP30
TPK1
GABPA
ATP5PF
ZNF398
ZNF425
GDPD1
DDHD1
SLC25A36
FAF2
PI4K2B
WDR82
ZNF76
NMNAT1
LZIC
DHX8
RFFL
CASP8
ZNF75A
TIGD7
ZNF596
TNFRSF10A
ZNF844
JADE2
HIF1AN
CNOT4
MTHFD2
GABARAPL1
ZNF800
GOLGA8A
OR1F1
SMG8
FGFBP3
BRWD1
ATG101
DEF8
FANK1
ZNF181
OCIAD1
EIF4A1
ZNF649
SRSF5
CEP85L
ATG5
TMEM30A
VAMP4
MAPK14
NXPE3
SPOP
NIPA2
DNAJC10
SMYD3
SLC35A3
GTF2I
ARL6IP5
YTHDC2
MED4
TXLNB
CEP135
WWOX
FCHO2
OTUD4
NDUFAB1
RNF145
PRKAB1
AP5B1
SAXO1
RRAGA
GK5
CDC5L
ZNF793
REXO2
GABPB2
CDC73
XPC
LSM3
GPR137
PDE4D
DDX60
SLC39A10
TBL1X
ZNF302
ANAPC10
ABCE1
NDFIP2
ARF6
IL16
LSP1
DNAJC5B
ZKSCAN2
MRPL17
CLN5
TRAPPC5
NCAPD2
MRPL51
TRAK2
STRADB
TSPOAP1
CCDC130
IST1
PRPF18
RPS15
SDAD1
RASGRP3
FCHSD2
CCDC92B
GRPEL2
CDKN2AIP
ALMS1
ZNF257
CPT1A
SNX17
EIF2B4
COPS4
CSDE1
TMBIM4
ZMYND11
CMTR2
PROSER1
NHLRC3
ZNF609
ZNF292
ZNF527
ZNF268
CXXC1
ICE2
REXO4
MEMO1
RSF1
AAMDC
EIF2B5
CCDC66
AQP3
SLC41A2
GGACT
CRADD
RUNX3
RERE
ZNF226
SNRPE
INTS4
INTS10
SAMD4B
NAA20
WDPCP
MDH1
DHRS13
UBE2Q1
RAD50
H1-2
MRPL38
ZZEF1
CYB5D2
CYP51A1
RUBCN
KRIT1
ANKIB1
NDUFC1
NAA15
ZNF266
APH1A
NFX1
FLCN
ZIK1
TUBGCP3
THOC1
ZNF668
CEBPG
ZNF682
SH2B1
TUFM
RAB18
ZZZ3
MFAP3
FAM114A2
ERLIN2
MORC3
ATIC
ZNF22
APMAP
PSMD6
BRF2
CCDC107
ERMARD
ANKAR
SSNA1
ANAPC2
TM7SF3
RASA1
UBE2D3
MTMR9
CAPRIN2
AOAH
ARHGAP22
AHI1
WDR7
SLC9A3R1
CLPX
YDJC
SPEF2
PALB2
DCTN5
WDR76
HSPE1-MOB4
HSPE1
HSPD1
DNAJC6
INTS9
HMBOX1
LIN9
ERLIN1
ZNF135
TRUB2
COQ4
ABCD2
VIRMA
TSSC4
IL1RAP
CEP63
ANAPC13
DBR1
TRAF3IP3
RARS2
ORC3
MRPL45
ACVR1
THAP12
GVQW3
PPP2CA
PPP6R1
PJA2
LRFN2
NDUFAF6
C10orf88
PDE4A
CNPY3
EXOSC8
UHRF2
LRIF1
ACCS
ACTB
LTN1
MTRNR2L2
MTRNR2L8
TTLL12
JMJD1C
MAPRE2
NDUFB3
FAM126B
RABGAP1L
TMEM70
POLR2J3
TTC32
ATP1A1
SLC33A1
TARS2
PPIP5K2
RBBP9
DNAJB12
CAT
REEP3
EIF3F
GTF2H4
SUPT7L
SLC4A1AP
CAMK1D
C3orf14
RNF187
RILP
SNAP47
NEMF
KDM3A
JMJD4
WDR11
MTRNR2L9
ATP5MC2