ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1799528 | CD4+ T cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◣ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
TMEM70
YPEL3
ZNF562
PUM1
SNX16
ZNF426
AKAP10
ZNF561
DUSP6
FEM1C
CEP85
WDR74
CASS4
KIAA1549
ACYP2
FAAH
EPS8
CCDC200
ITGA4
GBA
GOLM2
IL1R1
PAXBP1
EGR2
TMSB4Y
NOS3
CD47
BAAT
CEP72
SLC29A2
CYP4F11
ING2
NDUFS7
MTUS1
ACOX3
TRMT44
DGKZ
GMPS
GDPGP1
CIB1
TBL1XR1
RBPJ
ABCG1
THAP11
KLF14
NOD1
HAUS4
SET
NDFIP1
DMAP1
TMEM183A
PRELID3B
RIPOR2
RUNX2
INTS12
GSTCD
ZFP90
CBX1
AURKAIP1
ZNF623
STX16
THNSL2
ANKRD54
RTL6
PCYOX1
YWHAQ
ORC4
MBD5
NSFL1C
RAD54L2
SFT2D3
TSGA10
C2orf15
TMED2
ZNF117
GNL3L
RAB5C
ARHGAP39
MRPL19
POLR3E
RALBP1
TTLL1
CBR1
KLHDC9
DUSP4
B4GALT7
GAA
PDE11A
PTPRCAP
KDM7A
ZNF529
ZNF382
LCP1
ZNF605
DUS1L
SLC39A13
DCAF8
TIPARP
LTA4H
BMS1
TMEM68
TGS1
GTF3C5
ZNF28
TMEM41A
ITGAL
RPS29
COPS7B
TPM1
MEX3C
EXO5
DPY19L4
JAML
P3H4
CBR4
CAMK1D
MAN2A1
FGFBP3
COX16
CLK4
C17orf75
RBBP5
OPA1
ACTL8
RFX2
NUF2
PLEKHM1
CEP41
RPS7
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TBC1D19
USO1
DCAF10
TMEM43
CHCHD4
INO80D
SLC44A1
KAT6B
ORMDL3
FRA10AC1
WDR43
TMEM242
KMT2A
FAIM
ANXA2
STRADA
DPP9
S100A4
SYTL3
MRPL44
SELENOT
FAM207A
PSRC1
NOXA1
LUC7L2
FMC1-LUC7L2
CPPED1
TTLL12
CENPV
VWA8
CCDC114
SSBP1
ITGB3BP
EFCAB7
DRG2
HMGB1
USPL1
PPIG
TGFBR2
NDST2
MTF2
C3orf14
MLEC
RPL27
ZNF770
ILF2
EIF2D
PIGW
MYO19
GTPBP3
ANO8
STX6
ZNF737
ACSF3
NPAS4
ZZZ3
RNF6
SPATA13
UBE2G1
ZFP30
CADM1
METTL26
TDP2
ACOT13
STX18
NME1
ZMYND11
RAB11A
PHF21A
TMEM65
RCC1
PBRM1
GNL3
PRRC2B
CLUL1
AGGF1
FAM227B
DTWD1
RAB37
RABEP1
ANKRD40
RPP25
DCP1A
OTUD7A
PIK3R4
DEFB124
LNPEP
MAN2C1
ZSCAN31
DLEC1
PSMG3
YTHDC2
CDK1
KDM4B
RPS19
SCAND1
MTERF4
ADNP
DCTD
MAF1
NRF1
SAR1B
POLE4
SNX17
EIF2B4
PHIP
PARP14
ZNF236
SMARCD2
BSDC1
RTTN
SETD1A
SETDB1
CNIH1
FIS1
OSBPL11
ALG10B
TAF5
PPP6C
PSTPIP1
FBXO22
FKBP5
FRG1
PEX3
ADAT2
SKP2
LMBRD2
ZBTB40
LRRC37A3
NDUFB3
FAM126B
SUGT1
RAP2C
SUZ12
CD101
HLA-E
RAD51D
SAMD4B
EEA1
CD5
ZNF341
SLTM
SMIM13
RERE
PIP4P2
PLCL2
GK5
ELOVL2
SNAPC3
NOP58
TRAM1
NCOA7
GEMIN7
ACBD6
YBEY
MCM3AP
PRKAG2
NINJ2
CCDC130
PSMF1
R3HCC1
HEATR1
GSPT1
ENDOG
MARK2
ZNF844
ARMH3
HDAC1
NFYB
TPD52L1
PCDHGB6
MRPL21
IGHMBP2
WDR47
ZNF540
ZNF571
ZBTB45
MRPL39
STMP1
WIZ
DFFB
CEP104
IPO4
GNB2
NXPE3
NARS1
BRWD3
DDHD1
RPL37
TMED1
FCGR3A
AIM2
FAM98B
KNL1
PRPF3
TLK2
PI4K2B
POLG
ANKRD36C
ELF2
ATG5
TENT4B
ZNF510
TUBGCP3
AAR2
FAM160B1
AGO3
ZNF44
HERC6
POLR3B
BTD
LSG1
PA2G4
ADD2
DCT
MED23
ZFP62
RAB12
IFT140
CRAMP1
RNF122
MRPL40
HIRA
ZNF827
MFAP3L
USP45
NXPH3
NBN
NOP16
HIGD2A
TRDMT1
GGACT
TP53I11
SF3A3
TRIP4
PAFAH2
ATR
PSMG1
FBXO31
RSAD1
ZNF398
ATF1
CCDC97
VANGL1
PCBP2
UGCG
KIF21A
DNAJC25-GNG10
DNAJC25
ARID1A
HEBP2
MRPS31
BCAR3
KDM3B
RPLP0
SLC8A1
CCDC42
GTF2H2
FOXJ3
ANKRD36
CHFR
DSTYK
SNRPD3
GUCD1
RCOR3
SLC35E2B
USP30
CPLX2
FABP6
PDCD2
PREP
SNRPC
FAM53B
SNAP47
JMJD4
PRMT5
VPS13D
FAR1
LRRC10B
DTNB
GTF3C3
CALM1
CDKN2AIPNL
LRRC75A
SPAG4
NIPA2
PLEKHM3
RBM28
DHPS
NBEA
MAB21L1
ATF7IP2
DDX18
MAPKBP1
ING3
EPS15
PLK1
MRPL34
FZD9
SETD2
TOP2B
TIGD1
EIF4E2
PIGQ
ZNF829
ZNF568
COPS4
ZER1
NLRP1
PPEF1
ANG
ESRRA
RNASE4
SPTBN4
C8orf37
AGK
SLC38A2
ZMPSTE24
POLR2J3
RPS14
ZSCAN25
PPP2R5B
HEXIM1
LYPLA2
TMPO
GSTA4
CBWD5
CBWD3
CBWD6
C11orf49
YJU2
EFCAB2
NSMCE4A
HTT
RFK
EML3
ROM1
TATDN3
NSL1
SLC27A4
TSC22D2
EXOSC8
PAFAH1B1
GTF2I
PDE4DIP
JRK
LIMS1
PCID2
CUL4A
KMT5B
LDHB
CAPRIN1
DHX33
GORASP2
NMRAL1
HMOX2
CLDND1
MELK
RESF1
CABIN1
LOC102724265
STOML2
FBXL5
SELENOH
ATP5MC2
ZNF280D
ARAP1
TIA1
IL2RB
BIN2
LRCH1
SLC25A51
TTI2
ZNF14
SMDT1
NIPSNAP1
VTA1
NMBR
MRPL48
MRPL3
ANK1
SLC35B2
RBMXL1
KYAT3
PSMD3
HNRNPA1L2
TADA1
MRPL58
DYNLRB2
SMARCC2
HSPE1-MOB4
HSPE1
HSPD1
IST1
KMT2D
SLC35B1
CREM
CIZ1
IARS1
AMBRA1
MALT1
ZNF319
USB1
GTF2H2C_2
GTF2H2C
QSOX1
MGAT4A
NR1H3
ACP2
METTL9
ARHGAP22
NFKB2
PRAF2
MAIP1
C7orf26
GCLM
CASP10
KLHDC7B
RBBP9
EIF1AD
BANF1
ZNF599
HENMT1
HNRNPU
PXK
ZNF549
SMG8
ZMYM5
SLC30A6
RPSA
CHIC2
TPM3
ZNF254
QSOX2
CLBA1
SACM1L
ZNF839
COQ2
ADH5
POGK
KBTBD6
RPL26L1
RETSAT
ELMOD3
SNX5
MGME1
ARL4A
DNASE2
NMNAT1
LZIC
GFM1
USP3
CFLAR
DOCK8
HNRNPA3
VPS37C
KANSL1
HSPA6
TRIAP1
PTPN22
MYO5A
INPP5D
ZNF154
TTC32
SPRYD4
SNRK
YAF2
MDGA1
ZNF706
TOP3B
TACO1
PSMD6
SNRPD1
GABPA
ATP5PF
PTPN4
SLC10A7
PNKP
RAB18
CLTC
KPNA4
FGF9
KLRD1
TOR1AIP1
MPHOSPH10
MCEE
NELFB
LNPK
ZFAND6
CENPM
YTHDF2
DNAJC11
BACH2
COG3
INSIG2
INPP4B
SLC20A2
SMIM19
FAM133B
CTNNB1
DHRS13
TMEM69
PHF13
SLC22A4
ATP5MPL
METAP1D
TRAM2
RHOT1
MICAL3
KLLN
CIPC
PTEN
PARP16
C1orf198
UQCRB
NUP54
CDK12
SENP1
PFKM
LIG4
ABHD13
POLR3G
MBLAC2
PPP2R2A
MAD2L1
XCR1
INTS2
KCTD5
NEGR1
DNLZ
LTBP2
UAP1
TEFM
GRPEL2
ABLIM1
EIF2S2
UBE2F
SPECC1L
MLLT1
ZNF239
ALOXE3
RPN1
PRKCA
ZBTB24
EIF3F
WDR55
RFX7
ASF1A
HOXC5
LPIN2
SLC2A11
HUS1
MED4
TNFAIP8L1
ZCRB1
PPHLN1
FBXW4
GPCPD1
RNF214
PCSK7
BPHL
SUGCT
MPLKIP
OTUD7B
ISM1
PPP3R1
SUN5
SLC24A1
DRAP1
C11orf68
GFM2
CCAR2
WDFY1
PRSS27
C21orf58
H3C7
H2BC9
CHAF1A
TEAD1
PCNT
RUVBL1
EEFSEC
RRP1B
HSF2BP
THUMPD1
ITM2C
USP9Y
RPS20
RBSN
YAP1
RUFY2
DLST
NOP56
MYBL1
TRMT1L
SWT1
TRMT61B
PSMA1
HES3
ADPRS
MARCHF7
ELP1
ABITRAM
MST1
CCPG1
C15orf65
ZBED4
MEIS2
ZBTB7A
DBP
WDR24
STAT1
ZBTB20
CYB561A3
TMEM138
CMPK2
PLD3
C19orf47
SLC26A4
C1orf53
ZNF781
TBC1D9B
INPP5E
RPA3
SMG5
NR1H2
OGFOD1
NUDT21
PCBD2
GAPVD1
FAM102B
XPOT
MYD88
SNIP1
RMND1
ARMT1
TRMT5
SLC38A6
KAT6A
COMMD1
DDX5
CEP95
PPP6R3
TMEM177
MICALL1
PDIA4
GALC
SRRM3
RHOT2
GDPD5
TXLNB
MTHFD2L
LONP2
ABCC11
AGBL2
TFE3
CTNNBIP1
KCMF1
SORBS1
MTMR10
JUND
SLITRK3
COX7A2
CYP4V2
NUCKS1
VPS4A
C12orf57
TXNRD1
MINDY2
ITPK1
OLA1
C10orf88
FOXK2
OPN3
CHML
SPATA24
NCKAP1L
RNF13
CHGB
RGL4
TRIM2
TRAK2
STRADB
PDCD5
TXNL4A
UTP3
ZNF570
PPA2
ZNF569
SNX18
UNC50
COA5
ANKAR
VPS37D
ACCS
TFAP4
RAC1
NMI
YY1
CHD1L
PRKAB2
TDRD7
ZFAT
PRR14
ARID2
CPSF1
WSCD1
TTC4
RB1CC1
POLK
CERT1
CCDC86
IL21R
AP2A2
TSR3
GNPTG
PPIP5K2
KLHL20
RIF1
C2CD5
APEH
NFE2L2
KIAA1191
NRG2
LRIF1
TPGS2
IFT74
LPGAT1
PPM1F
PLAA
ZMYM1
RABGAP1L
PDCD6IP
GPAM
TRNAU1AP
RNF19A
SUPT3H
UBAP2L
C1orf43
PABPC4
BTBD1
BEND3
MACROH2A1
SNX25
CFAP97
TMEM263
INO80C
NCBP3
ZNF846
GOT2
SNX19
KCNH1
PDXDC1
ZGRF1
LARP7
N4BP3
FAM221A
GOLGA7
PLEKHA1
SYTL2
CDK5RAP1
RILP
BCL9
MRPL42
TRAPPC8
RBM7
C11orf71
EIF4G2
CITED2
SNX14
TMEM30B
GATAD2B
PCDHGB5
GHSR
MRPL16
YPEL1
SEC22B
PARP6
LEMD2
PRRC2A
WDR76
PAPSS1
PIM3
INPP5F
MYL12A
SLC25A15
ZNF251
CFAP298-TCP10L
CFAP298
ARL8B
PET117
KAT14
TMEM30A
SNX12
PTCD1
CPSF4
RTN4
SMPD2
PPIL6
CISD3
NEPRO
RNF135
TNFSF14
BRWD1
GARS1
ATAD2
ERLIN2
TM2D3
TRRAP
CSNK2A2
TM7SF3
CHMP6
KDELR1
PPP6R1
NDUFS3
KBTBD4
SLC35A3
TRMT2A
RANBP1
CAAP1
NPL
NCAM2
MIS18A
RASA2
VPS37A
CNOT7
HECTD2
INO80
NAB1
ZNF606
LIMD1
FOLR3
PARP2
FBXW7
BRIX1
RSF1
AAMDC
FOXN3
ZBTB4
POLR2A
DRAM1
TWF1
HIPK3
MAP1LC3B
TSFM
ZNF527
CCZ1B
ATPAF1
EI24
DMTF1
ZNF765-ZNF761
ZNF765
PJA2
C2orf42
SLC25A35
MICU1
CACUL1
GSDMD
ZNF391
WDR31
ZNF518A
PRCC
DNAJC14
PRIMPOL
CASP3
CAPRIN2
OXCT1