ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1799531 | CD4+ T cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◣ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

TMEM70
CAMK1D
SLC29A2
TMSB4Y
ITGA4
DUSP6
GDPGP1
CIB1
EPS8
GBA
RUNX2
EXO5
SAMD4B
TTLL12
RAB5C
ITGAL
THNSL2
KIAA1549
ZNF540
ZNF571
TSGA10
C2orf15
YPEL3
SLC38A2
CENPV
SKP2
LMBRD2
DMAP1
PSTPIP1
PAXBP1
PUM1
GOLM2
THAP11
MRPL44
NSFL1C
ORC4
MBD5
GMPS
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NUF2
ING2
RAP2C
CCNF
SFT2D3
EIF2D
MTF2
DGKZ
TENT4B
INTS12
GSTCD
PEX3
ADAT2
NDUFS7
RPS7
MED23
FAM207A
FAM227B
DTWD1
RAB37
NAP1L3
FAM133A
DUS1L
HTT
RAD54L2
PIGW
MYO19
TTC32
KLHDC9
DCAF10
MRPS31
TFPT
PRPF31
B4GALT7
MLEC
TMEM41A
NDST2
ADORA2A
KCNJ15
NCBP3
BCL9
PSRC1
NFYB
SLC44A1
STX16
VWA8
TDP2
ACOT13
SSBP1
C17orf75
AURKAIP1
KANSL1
STX18
ANKRD54
POLR3B
TPM1
DPY19L4
ALG10B
ZNF341
CTC1
DRAP1
C11orf68
RPLP0
SETD1A
KMT2A
RBBP5
P3H4
FKBP10
CTNNB1
CLUAP1
SLC25A51
PACS2
BRF1
NME1
ZNF226
ZCCHC4
UBE2G1
TMEM68
TGS1
STX6
SNX16
TRIP4
NLRP1
PIK3R4
RPL26L1
TMED2
SPEN
RESF1
C7orf26
TBL1XR1
WDR74
ZZZ3
LSG1
DCP1A
SPATA13
WDR55
STRADA
SF3A3
RPL37
ZMYND11
ATP1B3
NBN
RPS29
ZNF829
ZNF568
MRPL21
IGHMBP2
POLR2J3
TNRC6B
WDFY1
FRG1
FGFBP3
ATR
HMGB1
USPL1
FRA10AC1
TOR1AIP1
SCAND1
IRF2BPL
ZBTB20
CBR4
COX16
ZMPSTE24
TBC1D19
FLI1
BRWD3
PREP
TMEM43
CHCHD4
ANXA2
TTLL1
FKBP5
NRG2
INO80D
SRRM3
GTF3C3
C18orf25
ZBTB2
ITM2C
KDM4B
PRIMPOL
CASP3
USP45
ANKRD40
GTF2H2
OSBPL11
NPAS4
IL2RB
ANKH
NMRAL1
HMOX2
ZNF765-ZNF761
ZNF765
HSPE1-MOB4
HSPE1
HSPD1
NFAT5
CPLX2
GAA
TMEM242
SEC13
LRRC37A3
C3AR1
PHIP
KPNA4
SUGT1
PPIP5K2
NDUFB3
FAM126B
RPS20
DPYD
QSOX1
GRPEL2
CDK5RAP1
MRPL19
ZBTB39
RPL27
SNAP47
JMJD4
PPP2R5B
FAM118A
FAIM
ZNF28
U2SURP
TMEM116
ERP29
PIM3
HNRNPA1L2
ARHGEF6
PARP14
PRPF18
SNX19
ZNF562
CYP4V2
ISM1
ZNF555
NARS1
GFM2
EEA1
KDM3B
EP400
SIGIRR
TMEM65
PNKP
ERCC6L2
PSMF1
VPS13D
SLC33A1
CCDC114
GTPBP3
GNB2
ANO8
MTERF4
SLC39A13
EIF3F
GTF2H2C_2
GTF2H2C
LPCAT4
ZNF398
BACH2
ARAP1
RFX7
RPSAP58
ZBTB40
TGFBR2
UBE2O
AANAT
TMEM177
PRRC2B
GABPA
ATP5PF
ZNF510
IPO4
KAT6A
HENMT1
SELENOT
TNFAIP8L1
LIPA
NOXA1
RTTN
ZNF827
CALM1
USP30
CCDC200
MRPL3
MND1
SESN1
CEP57L1
KIAA1191
CPPED1
TLR6
RALBP1
MAPK1IP1L
NOTCH2
ANKRD36
KMT2D
ASF1A
PSMG3
RFK
POLE4
PTPN4
RWDD3
ARL8B
RBMXL1
KYAT3
SMIM8
SAR1B
AAR2
TXLNB
TBRG4
PXK
ACBD6
CAPRIN1
ACAP3
PUSL1
FAM133B
COA6
ADPRS
ITPRIP
DNAJC25-GNG10
DNAJC25
USP3
DRG2
SLTM
HNRNPD
DDHD2
TBC1D13
CENPS-CORT
CENPS
NEMF
IMPA2
RASGRP3
YTHDF2
SNX17
EIF2B4
PHF21A
RUFY2
HES3
PDS5A
TOP3B
KRTAP16-1
RHOT2
COPS7B
INTS4
BNIP1
CYRIB
DDX18
RNF6
IARS1
TACC1
FAM102B
SET
YPEL1
PRKCE
METTL9
RILP
VPS28
R3HCC1
R3HCC1L
ZFAT
NDFIP1
APEH
DSE
TSPYL1
MYO1G
POLR3E
NSUN4
RPL29
YAP1
HMG20B
METTL25
CCDC59
RAB12
RPS14
ATF7IP2
AGK
STOML2
EIF1AD
BANF1
TBC1D10C
NAA80
HYAL3
NINJ2
ACSF3
ALG10
C10orf88
NOTCH1
PAFAH2
BMS1
ATF1
DSTYK
TPK1
TUBGCP3
SLC24A1
TCAF2
SLC35B2
PUS10
PEX13
FAM160B1
ABLIM1
SLC43A2
ZC3HC1
MRPS14
GEMIN7
FOXJ3
CYP20A1
DUSP7
SMG8
ZC3H6
PCYOX1
ATP5MC2
ARMH3
LTBP2
SRI
MAP3K5
NRF1
RSAD1
ARID1A
UBE2F
ZER1
TTI2
ANKRD36C
TMEM183A
FEM1C
SYPL1
TINF2
KCMF1
PPP3R1
SDHAF3
TSFM
ACTR6
GGNBP2
CNTROB
CSNK2A2
USP1
LANCL2
EIF3E
PCBP2
EIF5A2
RB1CC1
TAS1R1
NOL9
ZNF391
CDKN2AIPNL
SMARCC2
DCLRE1B
AP4B1
RHOT1
C8orf33
NELFB
TOB2
ANXA2R
RSF1
VPS4A
AAMDC
NDUFS3
KBTBD4
SNRPB
ING3
ATXN7L1
KDM1A
B3GLCT
CLUL1
GOT2
TCTN3
TRAF6
RAG1
GLS
ALDH9A1
MYO1D
ITGB3BP
EFCAB7
SNX5
MGME1
ROBO3
NUP54
ADRM1
RGPD5
RGPD6
RGPD8
WDR43
PCID2
CUL4A
NBEAL2
EIF4A2
CEP135
LUC7L2
FMC1-LUC7L2
FMC1
LIG4
ABHD13
ZNF773
EVL
ZNF148
HEXIM1
KAT6B
CFAP298-TCP10L
CFAP298
MFAP3L
SLAMF8
ATXN2L
GGACT
FAM228B
SF3B6
METAP1
NDUFAB1
GSPT1
HIBADH
INO80C
MRPS23
WIZ
TMF1
GSTA4
OCIAD2
HUS1
FAM98B
RCOR3
DOCK8
ATP5MPL
EIF1B
ZNF74
POFUT1
PLAGL2
RMND1
ARMT1
LNPEP
HMCES
WWOX
MTERF1
REEP5
ZSCAN25
KBTBD8
ZFP36L1
SNX18
CD5
TES
TECPR1
ZNF846
UBIAD1
KRAS
LCP1
GARS1
ZNF561
TRMT61B
UCHL5
RO60
GNG2
CIPC
TEFM
SNRPD1
PRELID3B
VTA1
NMBR
SH2B1
BRPF1
TAB1
JRK
SMARCD2
USP4
TMEM222
MRPL1
PRICKLE4
FRS3
ZSCAN12
ARHGAP30
DNAJC11
CDK12
BRIX1
SMPD2
PPIL6
RNF125
MRPL38
WDR47
BRD7
PXYLP1
KLHL24
RABGGTA
PSMB7
LAMP1
ALG5
TRIM25
ARID1B
TRPC4AP
WDR70
RABEP1
EDC4
ERLIN2
ZNF350
KLHL20
HTR5A
MRPS2
C9orf116
SEC31A
SIRT6
ANKRD24
SLC48A1
CMPK1
CPSF1
ALDH16A1
AOAH
CCNC
SNRPB2
CREBZF
HS1BP3
USP12
TMIGD2
MAN2C1
TMEM101
XKR7
BUD13
SPIDR
THUMPD1
PPP1R11
RHOH
ANKRD46
ARL6IP5
ATL2
FAM53B
ATG101
RERE
WDR36
RUVBL1
FIS1
SERBP1
SNX12
SELENOH
NME6
GALK2
COPS2
GORASP2
CNOT6L
GALE
KLHDC2
PIP4P2
ADPGK
MOB4
WASL
LRRC75A
CCDC42
TADA1
CD83
PHB2
ATF7IP
RBM45
BRDT
EGR2
CEP85L
DDX1
MRPS15
ENDOD1
RABGAP1L
VRK2
MAF1
PUM3
FBXO4
SLC27A4
PDHX
APIP
TRAM1
PPP4R3B
MED4
TSPAN10
NPLOC4
TLN1
CREB3
OAS2
SLC35A3
C18orf21
TRMT2A
RANBP1
ZNF770
XPO1
SNX1
PPIB
ZFYVE9
ARFGEF1
SDK1
CBWD5
CBWD3
USP15
LLGL1
IST1
NCAM2
SCRIB
RPS19
TMBIM1
CDC42SE2
ACOX3
TRMT44
TIGD1
EIF4E2
CRBN
MRPS35
PSMD3
TUT7
SCAF8
TOX4
RAB2B
RASSF5
VSIR
TBPL1
CDK1
CLN5
NECTIN1
GPAM
WDR31
FBXW5
C8G
CARM1
ABCD2
TATDN3
NSL1
ZC3H4
PLEKHG4
LACTB
MTMR6
SECISBP2L
COX19
CEP120
SLC39A3
CRLF3
CSRP1
STARD10
HINT2
EIF3G
KANSL3
ADAR
IL7R
KLLN
CAPRIN2
OTUD7A
COIL
TMEM167B
HECTD1
CASC3
TRDMT1
GET4
VAMP4
CDKN2AIP
STAT1
TOE1
MUTYH
GLTPD2
AFAP1
LOC389199
POLR1F
POLR3G
MBLAC2
RABEPK
PDS5B
OPA1
PABPC4
ERBIN
RGL4
INSIG1
FBXO22
ZMYM5
HEBP2
ZC3H7A
SLC9A1
PPP6C
EEFSEC
ZNF710
LATS1
MAP2K5
ANKRD44
MRPL39
HIF1AN
TPGS1
PARP1
USP42
QDPR
NOP16
HIGD2A
ZNF605
ZNF254
SULT1B1
SMIM13
TEX261
ZNF786
RP9
CBX1
PDE8A
FAM217B
PPP1R3D
BIN2
ZFP64
ADH5
MRPS34
EME2
TTC4
SUGCT
MPLKIP
KCTD5
KMT5B
CLTC
MRPL17
LPIN2
RBM28
CNPPD1
RETREG2
IRF2
SBK1
AMN1
S100Z
SKIL
MRPS18C
HELQ
NUP107
MAGOH
ZNF3
TSEN54
CASKIN2
ANKLE2
HLA-E
DHRS13
CHIC2
MKRN2
SETDB1
RFX3
CAT
NDUFC2-KCTD14
NDUFC2
TMEM170A
EEF1AKMT2
GCFC2
PSMG1
FBXW4
PTEN
STAU1
SENP1
PFKM
TIMM9
KIAA0586
POLR2C
TDRD7
LAS1L
MAPKBP1
C2CD5
ZNF518A
PNPO
ATPAF1
INAFM2
STAT3
ZBTB45
PDCD5
PYCR3
BRF2
ZNF44
MARK2
NOP58
COMMD2
RASGRP1
KLF3
PTPRCAP
ANGEL1
FBXO32
VPS37D
PLEKHA2
NBEA
STAM2
MAB21L1
LRCH1
RCC2
INTS5
NCOA3
PSMD6
ZNF14
ZNF384
TBC1D9B
VHL
ZMYND19
LARS2
CCNL1
PROSER1
NHLRC3
NECAP2
PDXDC1
ZNF638
MRPL30
MITD1
RNF13
PPIL3
NIF3L1
ZNF501
TRIP11
KCTD6
CEBPG
BARHL1
CLBA1
HDAC1
NOC3L
RAF1
SAMSN1
MIF4GD
CCAR2
OGFOD3
HEXD
DCTN6
DOT1L
CAB39
CHD1L
PRKAB2
ZNF613
GNE
CXCR5
INTS10
CLK3
RAB18
ATG5
ZNF236
NIPSNAP2
PLEKHM1
CFAP69
NVL
PPM1M
STMP1
MRPL53
INPP5E
MRPL16
YBEY
MCM3AP
VPS36
CCDC6
PRKAA1
TACO1
LONP2
ABCC11
OXCT1
NMNAT1
LZIC
UFL1
TTLL4
CRACR2A
ZDHHC15
CCDC88A
IREB2
FLYWCH2
RAPGEF1
BCKDHB
SH3GL1
NIPA2
SPECC1L
CITED2
ZNF641
SPOP
TRUB2
COQ4
SEC23B
TRIB2
ANKAR
PAK2
INPP4B
TRRAP
RIC8A
BET1L
ZFP30
FNTA
STOML1
SENP6
ZNF517
HINT3
RNF145
ZNF549
CHST2
NFE2L2
MYO15B
MBTPS2
SNU13
KLF5
MRFAP1L1
BIN1
FBXW7
TMEM168
DET1
COX18
KRR1
RBIS
RRP8
ILK
HERC1
METAP2
INTS1
MTUS1
RPL6
PTPN11
ATMIN
MCU
N4BP1
UBQLN1
TESK1
PRF1
CDC73
CCDC150
ARL14EP
NEGR1
KIF21A
LPGAT1
CTCF