ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: DRX402531 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◣ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
PRIM2
ZNF562
PPIG
CEP85
BSDC1
ARHGAP39
YTHDC2
POLE4
RABGAP1
LUC7L2
FMC1-LUC7L2
FMC1
NOS3
YPEL3
ZNF623
CCDC200
PRAME
JMJD1C
REEP3
CCDC130
FAAH
KIAA1549
TOP3B
CBX1
STX16
SSBP1
CEP72
ACTL8
DMAP1
TRMT2A
RANBP1
SKP2
LMBRD2
CYP17A1
RIPK1
BAAT
ACOX3
TRMT44
MRPL40
HIRA
AURKAIP1
TM9SF4
MAPK1
MTRNR2L2
FEM1C
YWHAQ
TMEM70
N4BP2L2
SLC4A1
ATP1A1
TMCC3
ACYP2
RPS14
PRELID3B
TMEM191C
LOC102724265
STAU1
ELOVL2
CD47
SNIP1
RBBP5
TIPARP
NECAP2
KCNH2
ZNF426
AUNIP
SPPL3
BRWD1
MTRNR2L8
GP1BB
YPEL1
WDR74
GBA
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SMU1
ZNF76
CRKL
ATF7IP2
CHCHD2
ZNF561
NUF2
TTLL12
PSMB2
HTR5A
BTD
TTC32
FABP6
P2RX6
TMEM242
EIF2D
ARHGAP19
CLK4
CEP164
MARCHF2
CCDC88A
IGSF3
DCAF10
WARS2
MTRNR2L9
UBE2L3
PAFAH2
SAMD4B
TMEM41A
FRG1
VTA1
NMBR
KLHL20
FZD1
ATP23
MED23
ZBTB6
LZTR1
RNF187
PPIL2
FAM207A
WDR43
RCOR3
ZMPSTE24
FAM83A
TOR1A
ZSCAN31
ZCCHC4
PDE11A
SUB1
ANKRD54
GFI1B
TSC1
GTF2H2
PPIP5K2
ZSCAN25
DSTYK
BLM
SMARCD2
CENPV
FAM234A
NDUFA6
MTIF2
WDR36
PFKFB3
COQ2
SAR1A
MAN2A1
BHLHE40
PEX3
ADAT2
KMT2A
NPAS4
FAM133B
RMND1
ARMT1
VANGL1
ZFP30
NSFL1C
BICD2
TPM1
MPHOSPH6
CMIP
RTL10
GNB1L
DNAJB12
CDK5RAP1
TRAM2
GK5
MRPL44
FAM25E
TRUB2
COQ4
TMC6
HDAC11
SNX16
RPL37
MEMO1
INAFM2
ALDH3B1
NDUFS7
ARHGEF1
NME1
PSMF1
DDHD1
EIF4A2
NUP214
ST6GAL1
CFAP69
MST1
HOXC5
PAXBP1
ADRM1
AGK
ZNF408
ARHGAP1
PHAX
KLHL22
CSTF2T
SF3A3
DRAP1
C11orf68
ZNF554
ZNF12
SRP9
UGCG
TMEM222
SLC16A5
MICAL3
SLC44A1
KANSL3
RPS7
YDJC
NUTF2
CENPT
ZBTB40
ACP5
TDP2
ACOT13
SYPL1
C22orf39
PHIP
MTLN
RAB37
CCDC150
PKMYT1
TMEM65
SPHK2
RPL18
GNL3L
POLR2J3
PRPF3
ARID2
ZNF391
SLTM
SLC9A1
ASNS
HDAC1
ZC3HC1
RAB11FIP1
CHD1L
PRKAB2
RBL1
AARS2
GTF2H2C_2
GTF2H2C
B4GALT7
MGST3
SNAP29
PI4KA
RBSN
ADNP
CYP4V2
NXPH3
RBBP9
ZNF789
FAM227B
DTWD1
INTS5
CCNG2
RPS29
PSMG2
CEP76
LSG1
ZNF280D
FAM13A
CCAR2
CFLAR
EIF3F
KMT2D
CCDC69
DNAJB2
MKRN3
TFPT
PRPF31
RBM28
REV1
DGCR6L
PRCD
SNAP47
JMJD4
BTNL10
SCAND1
TPR
ODR4
TMEM101
PPP2R5B
MTF2
TRRAP
NOTCH2
DNAJC25-GNG10
DNAJC25
GTF2H4
SGK1
MRPL1
DDX18
MOB3A
IZUMO4
PPP6R1
SDHAF3
GPR3
TSACC
CCT3
USP30
SNRNP48
FUT1
ITGB3BP
EFCAB7
COX7A2
DQX1
FAM86B1
FOXD2
COX16
SLC29A2
RPS13
ZNF436
SOD1
CNGB1
KIF21A
C3orf86
PHF21A
ASF1A
TADA1
NUDT7
POLR3E
STMP1
ZNF117
METTL25
CCDC59
ZER1
PPP1CC
CPPED1
NDFIP1
ATXN7L2
RBIS
FAM3C
NACC1
LARS2
DCP1A
FKBP5
PPP5D1
CALM3
HLCS
PRELID2
SLC24A1
DRG2
SLC25A51
TMEM43
CHCHD4
CBR1
SYT7
TMEM191B
CD33
EXOC2
STX18
CCDC97
RPL26L1
ZNF341
TLR5
HIBADH
GTF3C3
FAM160B1
RCCD1
TTC4
GDAP1
KMT2C
DHDH
TTC26
SEC13
SOD2
WTAP
BRPF1
AP5B1
PTK6
WDR77
ATP5PB
DHX8
PKNOX1
SELENOH
RPS15
EPRS1
ING2
NMNAT1
LZIC
WDR70
METAP1
RAB23
LRP6
ZNF44
EPS15
SRCAP
LOC730183
TLE2
JAGN1
UBE3B
KCTD10
TENT2
TOR1AIP1
FAM98B
DNAJC11
AGGF1
LPIN2
INO80C
GTF3C5
TRIM58
TOMM5
HPCA
CEP120
ARRB2
SPOCD1
ATR
NDUFS3
KBTBD4
SRRM3
MAD1L1
UFD1
CDC45
UTP3
FOXJ3
PRRC1
RANBP9
TRIM52
RPSA
ADPRHL1
MRPL48
SH2B1
ZNF609
HLA-E
ZNF114
LEO1
OTUD7A
TARS2
ZSCAN30
MAGOH
CDKN2AIPNL
NUBP2
WDR11
KDM1A
DCLRE1B
AP4B1
ZNF3
S100A4
R3HCC1
MRPS15
MKRN2
CEP41
SLC25A16
CD55
DPY19L4
SLC39A3
NELFB
MRPL42
IST1
NOXA1
EFTUD2
CCDC103
DHX33
DCTN6
PHF19
REXO4
TATDN3
NSL1
PIGW
MYO19
ALDH9A1
ZNF808
SACM1L
CYREN
RBM48
PEX1
NDUFV2
BMS1
AGO1
CCNI
ATP5MC2
GFM2
COG2
KRAS
REX1BD
CLTCL1
CCRL2
SNRPE
TNPO3
RIMBP3C
RIMBP3B
KCTD9
CDCA2
MFAP3
FAM114A2
POLR2J
GTPBP3
ANO8
MTMR9
TJP3
SSBP2
ZDHHC18
ATP13A1
GALNT11
C18orf21
MTOR
WDR47
AP1G1
IMPA2
BRK1
CYB5R1
FRA10AC1
ADPRS
CYB561D1
TNFAIP8
VPS37D
PHKA2
EIF4H
ARL4D
HMGB1
USPL1
PRPF18
METTL9
HNRNPD
FKBP8
IMPACT
ANKMY2
TRIP4
GSTA4
EIF2B3
SNX19
HES3
MAN2C1
KCTD5
FUT3
EEF2K
TKT
PROCA1
NBN
SLC39A13
EEA1
FUT10
AQR
PTCD1
CPSF4
THAP7
FAM86B2
RPS26
SFSWAP
LEMD2
KATNBL1
KEL
COMMD2
COPS4
BRIX1
SAYSD1
CENPS-CORT
CENPS
ARHGEF12
SMG5
RBM45
ANKRD40
GLRX
METTL8
DCAF17
TMEM170A
ATXN7L1
GAREM1
ATAD2
EIF1B
KLHDC10
ACTR3
AGA
PTPRA
UBE2D2
TTC21A
GORASP1
SUGCT
MPLKIP
PRKCE
TCERG1
PWP2
LOC102724159
ZNF318
ZNF22
PPP6C
RETSAT
ELMOD3
PKD2L2
C1orf53
ASB6
FAM20B
KDM3B
CREM
ARL8B
CLPTM1
LSM8
BCAP29
PXYLP1
ZSCAN22
DHTKD1
ZC3H6
PRDX1
VARS1
TIPRL
FZD9
XCR1
HSPE1-MOB4
HSPE1
HSPD1
MRPL3
ZSCAN12
RPL22
MRPL58
CAMLG
BARHL1
IQSEC3
SMIM12
EIF3G
CEBPB
GDF15
INTS12
GSTCD
POLG
INKA2
DDX20
CCDC174
PPIH
SIRT6
ANKRD24
RFXANK
BORCS8-MEF2B
BORCS8
ELP1
ABITRAM
LAS1L
ZSCAN26
UQCRQ
GDF9
RIMBP3
NADK
PGBD5
CTNNB1
GSPT1
USP3
AP3B1
EEF1AKNMT
OGDH
RAD21
AQP8
MRPS14
MRPS33
PCBP2
INTS4
CS
NCOA2
NCBP3
GORASP2
RESF1
TTC21B
IMMP2L
SMPD1
RCC1L
VIRMA
PRKAG2
C21orf58
DGKZ
ARPC2
SSNA1
ANAPC2
TNIP1
FOXO6
ATP5MC3
RIF1
TBPL1
MDC1
SRI
SPRYD7
TFAP4
CLIC4
RPS20
SMIM13
BANP
CLUL1
PTPRCAP
YARS1
S100PBP
TFAM
GGACT
SMPD2
PPIL6
TPK1
PSRC1
MTBP
MRPL13
GEMIN5
NUDCD3
INTS10
CCDC71L
HEBP2
MAP3K4
KDM3A
TMEM68
TGS1
PGBD2
NBEAL2
SYP
AP3B2
SASS6
SNAPC5
PDE4C
H2BU1
H2AW
COX8A
P2RX4
ZDHHC24
ACTN3
BNIP1
ZNF770
HARS2
HARS1
ACVR1
GPR155
GDPGP1
CIB1
PRRG2
NOSIP
SPNS1
DNAJC14
DESI2
POT1
PRR5
SNRPB
RNF125
DPH7
PDAP1
BUD31
YME1L1
MASTL
GTF2IRD2
PMVK
TCAF1
FAM160B2
REPIN1
C19orf48
EFCAB2
CENPF
CCNF
JRK
CBLL1
RUFY2
PRRC2A
PSMD5
GCK
SLC19A1
CAT
FBXO22
TRAM1
RAP2C
CIZ1
MARCHF7
RAB12
USP35
KCTD21
ZBTB17
PPT1
IPO9
PRXL2C
IBA57
TSFM
MRPL19
SLC39A6
ELP2
KIF22
C1orf74
KIFC1
TFB2M
CNST
SLC29A3
E2F6
DHRS9
SCMH1
GAL3ST4
UCHL5
RO60
CT45A10
OXSR1
MED15
FAM78B
WWOX
GNB2
XKR7
SCAF8
SLC45A4
PPM1F
SPPL2A
ARHGAP28
RAB3IL1
POLR3B
MRPL16
CRBN
METAP1D
ABCB10
TMEM216
LMNB2
AKIRIN1
TATDN1
NDUFB9
PCTP
RSF1
AAMDC
NEK2
MED18
TMEM168
FNTA
RFX2
SLC43A2
MRPS31
GFM1
TRNAU1AP
OTUD7B
GINS3
ELP3
ZNF74
ZNF106
IMPA1
PPFIA4
ARRDC2
ZBTB26
CAV1
TACO1
DDX46
RINT1
SURF6
ZNF268
CUEDC2
SMAD5
ZC3H14
PAIP1
RPP21
SCNM1
LYSMD1
SMG7
TUFM
METTL3
SEC61A2
SNX30
DGCR8
CHRM4
H4C11
ETV3
PON2
TMBIM1
CALM2
TMEM59
TCEANC2
DTWD2
AJUBA
KMT5B
TOMM6
HNRNPF
SPACA9
AK8
ZNF517
PTPN18
WDR31
FAM8A1
SLC35E2A
NCOA1
BCORL1
SCG3
ACSL6
TMPPE
GLB1
CCSER2
KCNK5
C7orf25
DNLZ
NGLY1
PEX7
OXSM
MDN1
CUX1
NR6A1
SLC25A1
TEFM
ARMH3
NEK4
MTRES1
CDKL3
UBE2Z
UBE2B
CSRNP2
EPB41L5
SLC35B2
KCTD20
KATNA1
PUS7
PXT1
TARDBP
PLD4
MRPL28
SLC12A5
DHX37
GALK2
RUVBL1
COPS2
LTN1
EEFSEC
GOSR2
CYP51A1
TTC37
ARSK
RHOG
ITM2C
FAR1
CCDC50
CTNNA1
UTS2B
NUP93
DHX16
KANSL1
METTL18
C1orf112
ZNF460
BROX
AIDA
NDUFB2
MRTO4
LPGAT1
POGLUT3
EMC1
RAD54L2
PLEKHM3
CPLX2
HEATR1
CELF1
AIFM1
PLK1
CHEK1
ZNF668
SUPT3H
ZNF646
FBXO30
PTPMT1
COMT
RAB30
ALKBH3
STXBP3
ZKSCAN2
AHCYL1
ZNF579
SDAD1
DDX5
CEP95
ATL3
PLAGL1
ZMYM4
FAM167B
CFAP298-TCP10L
CFAP298
LRRC37A3
ZNF398
ERMARD
DEDD
DIDO1
GID8
FER
H4C3
RAC1
SPRED2
TUBA1C
RPS19
SLC35B1
NDUFA4
KIAA1191
HIBCH
ZFP62
MYO9B
HAUS8
GATB
CLTC
CDIPT
SECISBP2L
VPS29
RAD9B
COMMD4
VPS4A
DDX50
MFN1
SOS1
SRBD1
INO80B
NDUFC2-KCTD14
NDUFC2
NFE2L2
TAMM41
NAPA
FGFRL1
NR2C2AP
DMTN
MED13L
CHFR
PLOD1
DAB1
FIS1
GCLM
NVL
OMA1