ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX190305 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◣ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

WDR74
MOB1B
BSDC1
NFE2
MTRNR2L2
MARCHF2
GYPB
IL1R1
BNIP3L
GYPE
MAN2A2
MTRNR2L8
C21orf58
GYPA
CASS4
POLDIP3
SIRT4
C3orf86
RABGAP1
S100Z
ST6GAL1
MTRNR2L9
PPOX
VILL
HDAC6
SLFN14
KIAA1586
RGPD1
RGPD2
ZSCAN31
C12orf57
TCP11L2
KCNJ15
GP1BB
FKBP8
SAMD4A
GDE1
ZNF451
ARHGAP39
HEMGN
DNAJB2
PRAME
CHCHD2
ERMAP
TOP3B
SDE2
TBL1X
TMBIM1
DNAJB4
TTI2
CMIP
CA1
FAM83A
RBBP5
LYL1
MST1
DSTYK
CHPT1
WRN
NPAS4
TAL1
SSBP1
YPEL3
GBA
AQP8
CD59
ASIC4
HMBS
RPS7
DMAP1
PITHD1
KEL
ARCN1
TFR2
CPQ
RUNX1T1
AP1M1
MRPL40
HIRA
EPRS1
KMT5A
ABCB6
CBX1
TMEM242
TMEM191C
NUF2
OR52A1
SELENOH
TRIP4
PPIG
TMEM9
UTP25
RIPOR3
PLSCR2
TMCC2
TTC39A
BLM
MED23
CIAO3
PEX3
ADAT2
MED18
SLC38A8
MTF2
SMG8
NUP214
H4C4
POU2F3
PCIF1
NOS3
ABCF3
HTR5A
TMEM248
RFX1
NME1
PI16
TIMM10
DDIT4
MTRNR2L10
INO80C
HK1
RBM28
CNKSR3
C22orf24
GUSB
TEPP
TMPPE
GLB1
KLHL20
LUC7L2
FMC1-LUC7L2
FMC1
AURKAIP1
GUK1
SAMD4B
XKR7
FOXO3
FAM234A
TBX19
HERC1
CRYAB
FEM1C
SLC14A1
CAB39
G6PC3
RAB3IL1
TATDN3
NSL1
SPINK4
ZNF510
SAR1B
PSMB6
TRUB2
COQ4
VWA7
SKP2
LMBRD2
POLR3B
PPP6R1
HEPH
SF3A3
INTS12
GSTCD
MAPRE2
WASHC2C
BLVRB
FRG1
SACM1L
PAFAH2
UTP3
INTS5
COX16
ZMPSTE24
OPA1
H2AZ2
SMARCD2
ADPRS
NDUFA4
PRXL2B
TTC26
PRR5
ZNF562
NDUFS7
H4C11
COX7A2L
TSFM
RHOT1
H4C3
TARS2
KDM1A
SEC13
ABCC5
PRIM2
FAM228B
SF3B6
ZC3HC1
RHBDD1
KRTCAP3
EIF2D
DRAP1
C11orf68
TRMT2A
RANBP1
POLE4
ZBTB40
KNL1
NFXL1
USP6NL
TMEM259
CCRL2
ZNF391
MRPL30
MITD1
CCDC174
BMS1
C8orf37
SNX17
EIF2B4
VIRMA
TMEM43
CHCHD4
SPI1
TLE2
MRPS15
ZSCAN25
CENPF
DNAJB12
P2RX6
H4C8
MTRNR2L1
SLC24A1
VTA1
NMBR
ZC3H10
EEF2K
ATP5MC2
MTIF2
GORASP2
NECAP2
F11R
SLC25A37
DPP9
ADSS2
RABEP2
EHBP1L1
RPL27
POLR2J3
ELP3
NDUFS3
KBTBD4
SPRED2
SCNM1
LYSMD1
SMG5
UBASH3A
POLG
ZBTB45
HMGN4
ABHD16A
AIG1
ZSCAN12
KLHL12
ALDH1A2
TBC1D19
KMT2D
SPN
LSG1
RFX7
MRPS18C
HELQ
H4C12
TOR1AIP1
ILF2
GTF2B
WDR70
ATP2C1
GPR89A
BAAT
SPECC1
TACO1
CCAR2
ZNF408
ARHGAP1
PIAS3
TMEM87B
HLTF
PTMS
CRKL
DHX16
NPAT
ATM
ST7
WDR36
RRP15
DQX1
MAPK1
SECISBP2L
TRIM6-TRIM34
TRIM6
STX18
TMTC3
CEP290
SARS1
RPL37
SLC33A1
CDK5RAP1
IBA57
HINT3
ANPEP
PSMD9
HPD
RHAG
SCAND1
DHTKD1
CWF19L2
EZR
STK40
BROX
AIDA
METTL25
CCDC59
ZNF3
ZNHIT6
SLC18B1
INO80B
ADAR
DCT
ANKMY2
PRMT5
CRB1
SUV39H1
RMND1
ARMT1
FASTKD1
YDJC
PCGF5
METAP1
TAMM41
ISG20
DUXB
MRPL21
IGHMBP2
KANSL3
GALK2
COPS2
ACTL8
ATG4C
OBSL1
INHA
CTNNB1
MTR
HEATR1
ANK1
ABCA3
AQP10
KLHL22
NCOA4
WNK4
ATF7IP2
FAM227B
DTWD1
GTF2H4
MRPL24
RHCE
SCRIB
PDE11A
MTOR
FGFRL1
EIF3F
NCOA7
FAM13A
NUDT9
SLC35B1
INTS7
DTL
TUT1
RPS3A
C11orf49
OGT
POLR2J
CCDC90B
LOC102724265
CALCRL
RAB30
CYB5R4
TTC33
JMJD1C
DNAJC25-GNG10
DNAJC25
SLC44A1
CAT
REEP3
DBF4B
NNMT
STX16
COMMD2
POLR3E
MRPL16
NSUN4
ARRB2
MBNL1
RFT1
GCK
PAXBP1
SMG7
CCNC
ZMAT2
ZNF785
SPTA1
SMARCC2
SRSF7
THRAP3
DHX9
ATP5MC3
CS
BHLHE40
TRMT1
ABCB8
MAP1LC3B2
GRPEL2
METTL2B
EIF2B3
WDR24
EMC4
TMEM64
DDX1
LBR
MAN2A1
KCTD5
SNAP47
JMJD4
AQR
TAS1R1
NOL9
ATF6
TOR1A
NOC4L
DDX51
RPS14
LAS1L
NOL7
KATNA1
KCNH2
NUP54
CCNT1
R3HCC1
RPL5
STAT3
VPS29
RAD9B
NOP16
HIGD2A
IFTAP
ARMC1
GP6
BCAR3
ATR
RPS19
RBSN
SRFBP1
NEK2
ADARB1
ATP5MF-PTCD1
ATP5MF
HTRA2
MRPL44
PRPSAP1
TFPT
PRPF31
COPS4
SH2B1
MIA3
METTL6
EAF1
MRPS31
CCNL1
CSTF1
AURKA
STAU1
PUS10
PEX13
DDX27
ELP1
ABITRAM
ANAPC5
GPR89B
YTHDC2
FAM133B
COX7A2
C18orf21
ITM2A
PKM
MYNN
HMX3
TMEM41A
SDHAF3
SOD2
NUP107
WTAP
TMA16
OR2AT4
EIF1AD
BANF1
MRPL1
SRP9
CEP164
MAST4
RBBP9
IPO4
RSU1
CEP85
IPO13
S100A4
FAF1
LEMD2
POLB
SNRPE
CLTC
YJU2
ATL3
TMCC1
DDX18
KRR1
DNLZ
SSNA1
ANAPC2
DFFA
FZD1
LATS1
ICAM2
RAB37
TPR
ODR4
NGLY1
OXSM
BLOC1S1
CDK12
ZNF212
UFSP2
TFEB
NUDT13
EIF4EBP1
GTF3C3
BNIP1
TMEM101
CLUAP1
MRPS14
HEXIM1
CDIPT
SYF2
SLC39A3
ZNF791
ZNF490
MKRN3
STON2
SH2B3
CPXM1
MAN2C1
RAB11A
SEC22B
TMCO1
H4C14
H4C15
AMPD3
ATP6V0E1
CD68
MTRNR2L6
SLC25A51
CCDC107
PCNX3
MAP3K11
RINT1
SLC35E2A
FAM200A
GABPA
ATP5PF
BLOC1S5
COMMD9
SAMSN1
DLK2
GTPBP10
FBXO4
GTF2H2C_2
GTF2H2C
ATXN7L2
TMEM128
CSRNP2
TTC32
ATP1A1
ZRANB2
NDUFB7
SPTB
RHD
ZNF579
FAM162B
EPB42
MRPS23
HAX1
PHF21A
GFM2
PRDX1
H3C2
BRF2
SMIM12
CFAP69
RBM48
PEX1
LOC112694756
TMC6
YWHAQ
PPP4R3B
NUP205
THADA
GRAP2
LEO1
SNRPB
RAD52
RPL22
BAG6
APOM
DYNC1I2
EED
DOK3
TEFM
HBP1
DNAJC19
PKHD1L1
ZNF165
DHX8
MRPL45
BCORL1
DHRS9
DCAF10
NCAM2
ALKBH2
TMCO6
PURG
AARS2
WDR31
DHPS
NUP153
RCCD1
DNAJC11
PSMB7
ERCC5
SAR1A
SNIP1
TRAM2
TNFAIP8L1
OSGEPL1
THUMPD3
PRELID3B
DNAJC24
DCDC1
BAIAP2
NIP7
COG8
HSP90AB1
IFT46
STXBP6
ARL8B
TTC21B
SLC45A4
MMUT
CENPQ
ZKSCAN8
PURB
DAAM1
OR51T1
TMEM222
TMEM170A
UBFD1
EARS2
ITPR1
JUN
SUPT7L
SLC4A1AP
NR1H2
VPS33A
POGLUT3
KPNA6
BTG2
INTS4
TMEM167B
ATF3
FAM207A
HNRNPA1L2
ANKRD17
COQ3
IFI16
CCDC88A
PGBD2
ZSCAN9
CCDC12
SRRM3
CHMP7
SLC30A6
FUT3
AGK
RPS13
DHX40
CDKL3
AMBRA1
B4GAT1
DNAJC2
CLCN3
RABGAP1L
MRPL3
ZNF670
CYB561A3
TMEM138
LAMTOR5
PGBD4
EMC7
EIF2B5
ZDHHC24
ACTN3
CILP
ENKUR
H2BC17
H2AC17
OR4K17
ZCCHC4
BANP
TNPO3
EDC4
TRNAU1AP
CENPS-CORT
CENPS
BAZ2A
H2BC8
H2AC8
GSTA4
STXBP3
KAT7
YME1L1
MASTL
OGFOD2
MMACHC
SRP19
MRPL53
TRIB1
GCSAML
ZNF280A
DCLRE1B
AP4B1
NMNAT1
LZIC
LARS2
UFD1
CDC45
RBM25
TRMT11
ALDH3B1
STAU2
ALKBH7
RPS20
STOML2
ZNF846
MBTPS2
JRK
COMMD4
EXOSC6
SYCP2L
ALKBH3
TRMT5
SLC38A6
SEM1
BRAF
FOXJ3
KDM3B
HARS2
HARS1
YARS1
S100PBP
PDSS2
PPEF1
COX7C
RETSAT
ELMOD3
SHF
ALS2
CDK11B
CDK11A
HSPA6
LINGO1
KYAT1
ATG4D
FRA10AC1
TTC4
SNX12
YIPF2
TIMM29
MYO18A
SUN1
H2BC4
H2AC6
RBM45
TMBIM6
RANBP2
TAF11
ANKS1A
NDUFC2-KCTD14
NDUFC2
TIMM50
CACYBP
OR2L13
DDX41
PTPRCAP
PARK7
MRPL58
TMEM18
GPN2
PAK1IP1
C6orf52
PSMB4
SLC8A2
CFAP298-TCP10L
CFAP298
LTA4H
RPL38
NVL
CWC25
TMCC3
TUFM
FANCD2
MED15
FNBP1
ACP5
MS4A6A
GTF2H2
NR1H3
ACP2
PCBP2
RHOT2
MVB12A
CSTF2
FAM168A
PNISR
POM121
SUMF1
DMBX1
MRPL42
MDC1
TSSC4
AIFM1
LONP2
ABCC11
VPS25
ZNF460
PIK3R3
TPRG1L
N4BP2L2
MLEC
CEP120
ZNF770
TRIM41
TRMO
RNF145
DOCK8
PPP6R3
ABT1
PNPT1
LGALS8
NSUN5
TIGAR
RPS27
EPS15
GPN3
FAM216A
CD2BP2
AHCYL2
DHRS12
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
HUS1
U2SURP
PRRG2
NOSIP
PPP6C
TTC14
INO80D
ARHGEF1
TIGD6
HMGXB3
LIN54
ZNF74
ITGB3BP
EFCAB7
RILP
WDR11
GNB2
CRADD
HSD17B11
FAM72A
PPCDC
FAM178B
TM9SF4
USP15
PPIL2
CREBL2
NUDCD1
TOMM6
AP2S1
ADPRHL1
DNA2
ACOX3
TRMT44
MAGOH
ACBD6
PLS1
FBXO28
PACC1
LRRC63
NUDT3
FDXR
ALG10B
UCHL5
RO60
SLC25A16
DIDO1
SDAD1
BARHL1
GID8
RHOG
CHEK1
ING4
PPP2R2A
GLRA1
ILF3
PCCB
WDR43
PPP1R11
NFE2L2
ZNF554
MRPS16
EEF1A1
DPH5
GAB3
HMGB1
USPL1
FAM98B
ANKRD40
C10orf88
METTL8
DCAF17
PDE4C
ACVR1
SLC7A11
MBTPS1
MCCC2
TPK1
MRPL39
MED4
SLC9A1
ATAD2
TSPAN10
NPLOC4
SCP2
SLC27A4
WASHC2A
SETDB1
DEF6
TMEM209
DRG2
TMEM68
TGS1
USP9X
CLDN12
ALG10
PPIH
ERMARD
SNAP29
PI4KA
LARP4
CENPW
BRK1
ZKSCAN4
SCAF11
DMTN
MRFAP1
TSSK6
NDUFA13
H4C9
SGIP1
SNRPD1
CSDE1
NUTF2
CENPT
MKNK1
POLR1H
ZNF268
EXOG
ZNF862
PTPA
CRAT
DLAT
IGF1
MYO18B