ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX065554 | U2OS
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◣ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MAPRE2
ITGB3BP
EFCAB7
CCDC200
MTRNR2L8
BSDC1
COL4A6
COL4A5
SUPT7L
SLC4A1AP
KCNJ15
ZNF408
ARHGAP1
WDR74
GABPB2
KDM3A
ATF7IP
PAXBP1
YPEL3
RPS26
SMG5
TARS2
CDIPT
UBB
RGPD1
RGPD2
MTRNR2L2
THG1L
ZNF540
ZNF571
PRPSAP1
RPH3AL
HDAC8
PIH1D2
NKAPD1
CCNI
NDUFB3
FAM126B
CALCRL
CELF1
AHCYL1
RPL27
LRIG2
TCTEX1D4
BTBD19
KAZN
PPP6R1
PDE4DIP
CLPTM1
AURKAIP1
PPIL3
NIF3L1
GTPBP3
TFPT
PRPF31
ZNF806
POLR3A
ZDHHC6
VTI1A
RBBP5
RCAN1
NOL12
SSBP1
INTS5
SLC9A1
SLC39A6
ELP2
KDM5C
MAST2
RABGAP1
UBE3B
KCTD10
ABRACL
EIF2S1
ATP6V1D
IFTAP
PDE12
IL17F
NEK2
CDK12
ISY1-RAB43
ISY1
MRPS33
GTF2H4
ZNF302
DUSP6
HAX1
LY6K
RAD51AP1
C12orf4
CREM
ZNF383
DNAJC16
WDR83OS
WDR83
GBA
ARHGAP39
TBL1X
SLFN12
SF3A3
MTF2
COX7A2
AAAS
NBPF1
B4GALT3
SIRT3
PSMD13
MMACHC
ZNF585B
CD2BP2
FAAP20
YWHAQ
AP1G1
IGFL4
SLC33A1
GPC6
LACTBL1
ZMPSTE24
EIF3F
TTC26
LRP6
COIL
PPRC1
TRIM5
EPRS1
DMAC2
BAIAP2
ZW10
SNIP1
SELENOH
STC1
C3AR1
DYNLRB2
ILF2
HEMK1
RFFL
PLEKHG1
TMEM242
COX16
CASP10
RMND1
ARMT1
SNRPD1
IFI6
TNPO3
DDX42
CCDC47
NEMF
GLIPR1L2
CHMP7
RABGAP1L
ZNF226
TPK1
CYB561D1
COPS4
MRPL54
APBA3
PACSIN2
ARMCX5-GPRASP2
ARMCX5
NME1
RPA2
AKR1A1
RERE
STAT3
RNF125
CEP120
STK40
ZNF790
MRPL1
AIFM1
MICALL1
LSG1
INKA2
DDX20
DNAJB12
WDR55
USO1
ZNF793
C1orf174
FBXW10
PHF5A
ACO2
HEATR1
INTS2
ZNF335
REXO4
DYNC2I2
UQCRC2
YTHDF2
TIMM10
JMJD1C
CEP162
MTR
CGGBP1
FNTB
C3orf38
EIF1AD
BANF1
MTBP
MRPL13
SLC25A53
TUFT1
PEAK1
HMG20A
SH2D5
TUT1
ZNF56
SLC35A4
APBB3
RBM25
UFC1
MED11
GAPDH
CCDC130
TRUB2
COQ4
PLK3
CCNC
CLASP2
TBC1D19
ZBTB40
TRMO
CALCB
RNF207
EIF5A
PSMB7
ZNF829
ZNF568
NOL8
CENPP
RPL11
RSPH3
FRRS1
NDUFS7
RBMS2
GPX1
CPN2
GPX8
SMG8
CCDC97
ZKSCAN2
SCYL3
ZNF331
ZNF461
RFXANK
BORCS8-MEF2B
BORCS8
PRKCSH
CCDC151
ANKRD1
GTF3C5
TIMM9
KIAA0586
PCNP
SUGP1
MAU2
ZNF221
SIN3B
MNAT1
CSTF2T
BORCS7
TRMT11
CLN3
SCARB1
RPL7L1
ZNF623
TRMT1
RCAN2
ZFP30
GORASP2
LURAP1
ZNHIT3
USP9X
NME7
BLZF1
MTRNR2L9
AASDH
PSMB5
TM2D1
ZNF566
XPNPEP3
ST13
SYAP1
FEM1C
ZSCAN22
RPS3A
ZNF300
WDR11
ZSCAN30
SIRT4
SLITRK5
SLC7A11
ZSCAN23
SULT1C2
BNIP1
PSMD3
FAM234A
STAT6
UBQLN1
TEFM
KDM1A
SLC39A9
ERH
NUDT5
CDC123
TFB1M
C6orf118
FRA10AC1
PPIP5K2
IRF9
C19orf25
CLCN3
ADRA1A
TCIM
MED18
RBL1
TBC1D22A
PLPP5
NAV2
UTP3
SESN1
CEP57L1
TTC31
CCDC142
ZRANB2
NIP7
COG8
ABCF2-H2BE1
ABCF2
TBC1D1
ELSPBP1
UIMC1
CCNG2
NRL
DCAF11
SPEF2
CD320
ZSCAN4
FCRLA
UFD1
CDC45
PES1
PLS1
GPATCH3
EXPH5
HOXB13
PRPF18
VPS13B
EFCAB14
RPS7
SOD2
WTAP
ARMC1
EIF2AK3
TTLL12
TTC32
CLASP1
RPS27A
CLHC1
CSNK1E
PIP5KL1
EIF3E
CLTC
PREPL
CAMKMT
SLC1A3
CELF3
KLK10
MRPS18C
HELQ
MRPS23
NCOA7
RGL2
DCTPP1
METTL25
CCDC59
LZTR1
TOMM40
GTF3C3
ZNF165
TRAPPC8
KIAA0319
GABPA
ATP5PF
C19orf48
EFHD1
SMIM12
KCTD9
CDCA2
CMSS1
PEF1
CBR1
OSBPL8
KAT7
ZNF2
CACTIN
IFT46
DLAT
RUFY4
SPR
CPPED1
TIGD1
EIF4E2
SNX3
ZNF14
ABCD2
NRDE2
SH3BP4
MAIP1
RIF1
ALG14
SFSWAP
CNPPD1
RETREG2
NECAP1
ALDOA
PLK2
NOP16
HIGD2A
ROCK1
HSCB
CHEK2
IPO4
CCDC107
ZNF24
TXN2
POLR2J3
RPS14
ZBTB8OS
RBBP4
TBCB
POLR2I
SF3A1
CCDC157
TPGS1
ADGRL1
NEURL4
METTL1
EEF1AKMT3
EHD2
CLCN4
PUS10
PEX13
TMEM259
SRSF1
PLEKHG2
UTP18
MBTD1
POLD4
INO80C
INO80B
CCDC174
KIF20A
BRD8
SUGCT
MPLKIP
TTC14
LYPLA2
TBC1D2
ZNF260
GTPBP2
PIK3CB
SULF1
MRPS14
IPO13
RHOT1
PEMT
VPS52
RPS18
MAN1C1
NKX3-2
CEP85L
ATG4C
HBS1L
ANKRD17
USP22
TXNDC17
KIAA0753
GALM
PEX3
ADAT2
TMEM222
MRPL48
DHX16
TMBIM1
SASS6
CZIB
PNISR
CORO2A
STX12
STX18
MDC1
TMEM128
GTF3C6
CDK5RAP2
ZNF708
DCLRE1C
LIMCH1
MOB4
POLG
THOC5
YJU2
SLC25A44
BANP
TM9SF4
DDX41
OSGEPL1
HAUS6
FDXACB1
C11orf1
ZFC3H1
THAP2
CTH
ADIPOR1
CES3
KMT5C
ARHGAP18
PRSS23
TMEM69
HACD2
MBNL2
GABARAPL1
WASF1
FUCA1
G2E3
CDC40
MEGF8
CALM2
COPS7A
MRPL11
TNFRSF19
UBXN7
FOXO3B
NSUN3
DHFR2
NAA38
CYB5D1
CENPA
LRP10
GHDC
IFI44L
RBM45
ZNF585A
DNAJB4
AARSD1
MED16
PTPA
CRAT
FURIN
RUVBL1
NDUFS3
KBTBD4
TMEM101
RPL26
TIMM50
S100A13
SH2D3C
DNAL1
HTR3A
S100A1
NHS
DNAJC25-GNG10
DNAJC25
PPOX
TAF12
RPF1
LIMA1
WASF2
BRCA1
DONSON
PMF1-BGLAP
PMF1
SNRPD3
GUCD1
PIKFYVE
ATP2C1
ACSL1
SMARCAD1
PPIG
HEXIM1
PRKAG2
TENT2
SLC35E2B
SBNO1
CSTF3
DMAP1
ZBTB45
SRSF4
COA3
CNTD1
GCNT2
APOBEC3G
BRD4
KANSL3
ZSCAN25
DDX46
UBL7
POLR3F
DZANK1
CENPW
SMAD3
SHB
GOSR1
ZBTB20
AP3B1
ACBD4
FOXP4
SUPT4H1
SIAH1
ZNF573
DDI2
CARS1
ZNF506
KLRC2
ACOX3
TRMT44
UBOX5
FASTKD5
SRCAP
LOC730183
DYNC1I2
ARHGAP19
MRPL27
EME1
SYNJ2BP-COX16
SYNJ2BP
ABI3BP
PAFAH2
MTIF2
RAB30
PDCD6IP
HIBCH
WDR5B
APOL2
TBC1D9
FAM71E1
EMC10
SNAP47
JMJD4
TTI2
DNAJC11
MRPS15
CYB561A3
TMEM138
KDM8
UBE2Z
FAM199X
LRIF1
LMNB2
LMNTD1
TRMT61B
NEK4
PIGL
CRNKL1
CFAP61
KIF2C
DNPEP
KIFBP
LMNB1
PDE4B
C2CD5
ANO8
FGD4
ATXN7L3B
TAOK2
FAM124B
CREB3L2
C18orf21
ATP5MC3
IREB2
SPAG9
KLHL18
KIF9
REPS1
MCCC1
FAM160A2
GBP2
CLUAP1
INTS4
GDAP1
BCL2L13
PPIL4
HIRIP3
AMPD3
ZNF576
IRGQ
TMCO6
SELENOP
MTOR
CD55
DNAJC6
PSMD8
NAPA
ZNF254
PMVK
CSRNP3
CHST4
VWA5A
IFIT3
FHL1
RTTN
PPIH
QRICH1
SMARCD1
ZNF416
ZNF48
INPP4B
CCS
CCDC87
TBC1D17
AKT1S1
DCAF10
PRRG2
NOSIP
SCP2
KIF15
KIAA1143
FKBP8
VPS45
ATAD3A
SLC25A21
MSANTD3
CACHD1
INSYN2B
SULT1C4
SEC16B
NECAP2
AARS2
RCC1
ZNF764
PSD
MRTO4
USF1
SLITRK1
EMC1
SLC30A10
FBXL15
NOS3
RPL29
WDPCP
MDH1
SPHK2
RPL18
SMAP2
SECISBP2
PDK2
MUC1
AMOTL1
CCDC74A
SULT2A1
FBXO16
MAT1A
RPS19
FBXW7
GNAL
CMPK1
TMEM41B
WDR89
SH3BGR
PHB
PLA2G4C
PKD1L2
SCGB1A1
EXO5
TRPC4AP
CCT8
POC1B-GALNT4
POC1B
PRKCI
GPN2
ZNF700
EGLN2
C11orf52
GFM2
SLC35B1
ZNF518A
ZNF791
ZNF490
SNU13
ZNF599
ARRB2
SLC35F2
WDR75
PRR3
PAM
GNL1
PTCD2
MRPS27
AIP
CCDC74B
NR1H3
ACP2
CFAP298-TCP10L
CFAP298
SENP1
PFKM
DHDDS
ARHGAP9
MARS1
ACP3
HSPE1-MOB4
HSPE1
HSPD1
FAM13A
WARS2
PRR14
GOLPH3L
ACBD5
IRAK1BP1
KIF27
ORAI3
RAI14
COMMD2
C8orf37
TMBIM4
PDE7B
ANK3
TNFAIP1
IFT20
ATAD5
ELOVL1
EXOC7
ZBED5
STING1
ERGIC2
RPL23A
MTFR2
CDRT1
RRAS
DNAJC12
DDX18
SPNS1
PTBP1
PNO1
ALDH3A2
ANK2
RPL32
NCLN
GLRX
TMX2
MED19
PUM1
RPS15
SREK1IP1
CWC27
PARK7
TRIM41
STAT1
ARL14EP
PRCC
BAZ2A
TAF13
CUEDC2
UTP11
COQ3
SF3B2
ERAL1
RPAIN
NUP88
AGPAT4
EXOSC5
BCKDHA
CERCAM
TBX18
RPS29
SMG7
PSMA1
ARL6IP5
YLPM1
ZNF687
IPP
PSMB6
IWS1
TRIM23
TRAPPC13
SHLD3
CUTA
CDCA3
IQGAP3
PIP5K1C
ALG10B
C17orf75
RESF1
RABGGTA
SLC30A6
ANKRD13C
NUCKS1
ACVR1
ANP32E
TIMM22
MYBBP1A
PPWD1
CENPK
DENND6A
RBM42
CLASRP
GRIPAP1
CCNB1IP1
KMT2A
HMGB1
USPL1
CHD1L
SNRPB
PRKAB2
GTF2B
MDM4
UBXN4
CASP8
NDUFA9
AKAP3
IQCG
RPL35A
RTCB
TMEM219
UQCR11
CABP1
SCAND1
SCNM1
LYSMD1
MEMO1
NAT10
ETFBKMT
THAP10
LRRC49
TCHP
PRKAB1
ATP6V0E2
ZKSCAN8
CHD9
NOCT
TNPO2
CENPH
PRMT1
MED28
DTX3
ZNF391
ADPRS
CDK19
TMEM167B
ZZEF1
CYB5D2
APRT
RTEL1
CENPF
FAM217B
MST1
PPP1R3D
OXSR1
MZT1
BORA
KXD1
BPNT1
FBXO8
CEP44
ELP5
CTDNEP1
SLC25A35
AKIRIN2
SUN1
CCDC171
RHOJ
KATNB1
GGTA1
MEOX1
TATDN3
NSL1
ZZZ3
SNX12
ZNF484
NFX1
ZNF613
PCNX3
SELENOF
HS2ST1
ZNF593
C1orf232
MYBPHL
MAP3K11
LHFPL1
DRG2
POLR3B
FAM228B
SF3B6
SH2B1
ZNF570
ZNF569
DEDD
GAPVD1
PPP3CB
EXD1
CHP1
WDR61
DHRS4
PIK3R2
TMED5
CCDC18
KIAA0408
FGFBP3
PPP1R11