ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10976388 | 293
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◣ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

WDR74
BSDC1
MAPRE2
MTRNR2L2
MTRNR2L8
KCNJ15
ITGB3BP
EFCAB7
SF3A3
MMACHC
NME1
COX16
MTF2
RPS7
TARS2
RCAN1
CLPTM1
TBL1X
MED18
DHX16
INO80B
ALG14
DNAJC16
COX7A2
STAT3
INTS5
SMG8
MRPL30
MITD1
RPL27
ATF7IP
PPP6R1
COPS4
KDM1A
SLC9A1
KDM3A
TUT1
PAXBP1
ZNF226
AIFM1
ZNF408
ARHGAP1
NDUFB3
FAM126B
SMG5
SELENOH
DNAJC25-GNG10
DNAJC25
MRPS23
SLFN12
RABGAP1
SUPT7L
SLC4A1AP
PPIP5K2
AHCYL1
DPP9
RPL38
UTP3
LY6K
ANKRD13C
VTA1
NMBR
DUSP6
STC1
RGPD1
RGPD2
RBBP5
GABPB2
CDIPT
MTBP
MRPL13
PIKFYVE
STK40
EIF2S1
ATP6V1D
SLC33A1
PSMD3
NOL12
KDM5C
RFFL
TCTEX1D4
BTBD19
AURKAIP1
C1orf174
SSBP1
FAM124B
TMEM101
PIH1D2
NKAPD1
CCDC174
ALG10B
EIF3F
KRR1
BANP
CALCRL
ILF2
DDX41
HDAC8
ZNF585A
ARHGAP39
SPHK2
RPL18
CDK12
IFTAP
RCAN2
DMAP1
EFHD1
GPC6
ZRANB2
TFB1M
CSNK1E
WDR83OS
WDR83
PCBP2
ZNF806
BNIP1
ARMC1
ADRA1A
MICALL1
C8orf37
GTPBP3
RNF125
PRPSAP1
VPS52
RPS18
PSMB7
PSMD9
HPD
RPL37A
C4orf51
ATP5MC2
MED23
RMND1
ARMT1
LRIG2
GBA
NPAS4
CCNT1
ZMPSTE24
RAB30
TMEM30A
PSMB6
COMMD2
RAD51AP1
C12orf4
PAFAH2
CCDC107
FAF1
DDX18
GOSR1
SNX17
EIF2B4
OBSL1
INHA
RPTOR
GTF2B
REXO4
HAX1
RPS26
WDPCP
MDH1
GTF2H4
COASY
DNAJB12
SNRPB
TM2D1
PIGL
ISY1-RAB43
ISY1
POLR1H
INTS4
POLDIP3
TIMM22
PACSIN2
MOB4
DHX8
CALCB
NUF2
ZBTB45
INO80C
DCT
PHB2
UFC1
CRADD
SEC16B
ZNF286A
MRPL45
LURAP1
NEMF
TRUB2
COQ4
WDR36
TOMM40
NEURL4
TTC5
MRPL11
IGFL4
PDE4DIP
ZNF165
ZNF331
MVB12A
SNIP1
MRPL1
YJU2
TBC1D9
TBC1D19
CCNI
HEATR1
PPIH
FBXW7
ZDHHC6
VTI1A
EIF3D
CORO2A
ABRACL
LSG1
MRPS15
FDXACB1
C11orf1
ELAC2
SCNM1
LYSMD1
NOL11
CYB5R4
EFR3B
ZBTB40
GFM2
NUP54
C11orf49
CMSS1
SYAP1
EIF5A
TACO1
PPRC1
TIMM10
DBF4B
SIAH1
ZNF510
ZNF56
ARMCX5-GPRASP2
ARMCX5
ATG4C
EIF2B3
PDSS2
CASP10
SH2B1
SIRT4
ZNF585B
ZNF540
ZNF571
TTI2
MAGOH
SLC35B1
OAZ3
CDC5L
DNM2
NR1H2
MDM4
MAN1C1
GSTA4
NR1H3
ACP2
POLG
NCOA7
RPL22
RPL11
SRRM1
UQCRC2
PEX3
ADAT2
TMEM242
GTF3C3
GALK2
COPS2
LRRC29
RPA2
UBE2Q1
MTRNR2L9
ZNF570
ZNF569
GPR137
ACTR6
PBLD
HNRNPH3
ZNF484
TTC26
RPL26
ZNF221
UQCRH
LRRC41
IPO4
GOSR2
RBM8A
MED16
TTC32
BRF2
LTA4H
RPL29
PHF12
RUVBL1
TSFM
TAS1R1
NOL9
UBQLN4
LAMTOR2
DNAJC11
STAT6
ARL14EP
UTP25
LYPLA2
PRKCI
PLEKHG1
IFI6
IL17F
AP1G1
CSDE1
TRIM5
ZNF790
TRAPPC3
USF1
RAMAC
KANSL3
CDK19
AMD1
KXD1
FOXO3B
DHRS13
ZNF461
ETFBKMT
GPATCH3
SLC30A5
FRRS1
DSTYK
MRPS18C
HELQ
NUP107
FNTB
COL4A6
COL4A5
TRIM2
HIF1AN
MRPL48
EIF3E
PRMT5
IPO13
SLC30A6
SMIM12
MZT1
BORA
PIP4P1
RBM45
U2SURP
CUL2
MED11
POGLUT3
RPL18A
SEPHS2
YWHAQ
TFPT
PRPF31
TMED1
METTL18
C1orf112
SLC39A9
ERH
KAT7
HECTD3
RABGAP1L
PPIL3
NIF3L1
RWDD1
AASDH
MTR
PRRG2
NOSIP
RANBP2
ZNF48
ZNF184
TMX1
SULT1C2
LUC7L2
FMC1-LUC7L2
FMC1
ZNF350
TSSC4
NKAP
RUFY3
RACGAP1
NECAP2
THG1L
CLASP2
MSL2
SRSF1
MAP3K7
TIPRL
KIF2C
GALM
RPS12
CCDC77
GPN3
FAM216A
GABARAPL1
TEFM
CELF1
ATP6V0D1
B4GALT3
SIN3B
CCNC
NOP16
HIGD2A
RAB5IF
SDHAF3
INKA2
DDX20
EFCAB14
ATP5MF-PTCD1
ATP5MF
CCR7
CAND1
SUPV3L1
SYCP2L
ELOC
RITA1
DDX54
DCP1A
CEP120
AJUBA
SF3B5
ACVR1
SEMA3D
INPP5B
CDK5RAP1
MTIF2
PARP2
PUS10
PEX13
UFD1
CDC45
ACBD5
TTC39A
RTTN
GORASP2
DNAJC24
DCDC1
COIL
EMSY
ILF3
KAZN
OS9
SMU1
TMEM259
ZNF383
RNF207
STRIP1
ADIPOR1
PKDCC
TNRC6B
TRMO
TMEM128
DEDD
BMF
POC5
NOB1
NDUFS7
EIF5B
KDM8
TXNDC9
SLITRK5
RC3H2
TGDS
KIAA0319
FIG4
AK9
MDH1B
FASTKD2
DDX46
CREM
PES1
UBR2
BAG6
APOM
THRAP3
UTP11
PCNP
TUFT1
ARNT
MBNL1
GTSE1
DRG2
TATDN3
NSL1
COA6
RPS3A
QRICH1
SCP2
RNF216
PRCC
TBC1D23
NSUN3
DHFR2
TRIP4
NEK4
HEMK1
OSGEPL1
TRIM46
KRTCAP2
EFTUD2
CCDC103
HIRIP3
OXA1L
CHST4
TRMT5
SLC38A6
ZNF180
EEF2K
RLF
NUP35
MGRN1
C1orf109
TIMM44
SH2D5
TRNAU1AP
CENPF
TIMM50
SLC2A11
MBNL2
LOC644090
RPL37
MNAT1
MRPL3
SESN1
CEP57L1
MRPL19
ATP5MPL
SREK1IP1
CWC27
PPP1R8
IRF9
MRPL24
RCC1
HEXA
TRMT112
PRDX5
DYNLRB1
MEGF8
INTS9
HMBOX1
NOLC1
ZFC3H1
THAP2
ACTR1A
ORAI3
SUFU
TBX18
METTL25
CCDC59
MRPS33
RIF1
SLC25A32
DCAF13
OSBPL8
NEU1
PSME3
SIRT2
NFKBIB
RPS27
COPE
DDX49
ARL14EPL
HMGB1
USPL1
N4BP2L2
UIMC1
SMARCD1
STARD10
NFX1
TAF13
ADGRF2
ADPRS
LRP6
ATP2C1
HSPA9
RIOK2
PHF5A
ACO2
DIPK1A
CALHM5
JMJD1C
SNRPD1
ZW10
TRAPPC8
CWC25
MAD2L1BP
HAUS4
ZNF260
RNF43
FBXO38
ARL17B
ARL17A
GTPBP2
FUCA1
SGTA
COPS7B
MAN2C1
ZSCAN30
ALG10
GNAL
YARS2
RBM25
BPNT1
MUC1
HPS5
GTF2H1
ZNF547
TRAPPC2B
TEDC1
GABARAP
PDE6D
ABCB6
COPS3
SUGCT
MPLKIP
C18orf21
RAB18
RBL1
METAP1D
BTRC
DNAJB4
C3AR1
CEP350
FAAP20
C9orf72
FUBP1
EIF2AK3
SEMA5B
PPIG
CCDC97
MLEC
AARS2
BAIAP2
PLK3
SLC25A53
SRSF11
LRRC40
USP4
NOL8
CENPP
PDE12
YIPF2
TIMM29
C19orf53
ZNF793
CTU1
ADGRL2
NUDT15
TTC14
ZNF345
PAMR1
ZNF829
ZNF568
RPL5
NSUN4
TMBIM1
COPS7A
CREBL2
CLASP1
FGD4
MAPKAPK5
DDX42
CCDC47
RCHY1
PYROXD2
TSR1
SGSM2
CSNK2A1
TRIM38
RERE
SNRPB2
NRL
DCAF11
S100A13
CDK7
HERC5
NDUFA9
AKAP3
TSSK6
NDUFA13
SNRPG
S100A1
TIMM9
KIAA0586
PSMB3
ATAD5
ING4
TNFRSF19
NUP205
OGA
SUGP1
MAU2
FBXL19
RBM15
C11orf65
ARRDC2
BOLA1
HTR3A
SMG7
USO1
RPLP0
SRSF4
CD2BP2
NFYC
CASP8
DCTPP1
AMPD3
ZNHIT3
NUDT13
ZNF230
GCNT2
ZSCAN4
RSPH4A
CFAP298-TCP10L
CFAP298
HMGN4
UBOX5
FASTKD5
UBB
HBS1L
PREPL
CAMKMT
SF3A1
CCDC157
NUP42
CLNS1A
PSMB5
FAM228B
SF3B6
STOML2
TMEM167B
SRFBP1
TOMM20
CABIN1
ZBTB8OS
RBBP4
CDK4
PDCD6
DUSP12
RPS6KB2
OSCAR
NDUFA3
ZNF175
CLN3
IFI16
CES3
NHS
ZFAND2B
PYDC5
MRPS14
AAR2
HEXIM1
MTOR
ACBD4
TAF5
RANGAP1
TAF12
PUM3
EMC4
MICOS13
HSD11B1L
AKR1A1
ZNF565
ZNF146
CEP162
MPDU1
LOC100996842
INSYN2B
SLC1A3
ZMAT2
SPRY1
STX16
POLR2J3
EPRS1
ZNHIT6
UFSP2
TAF10
SNX3
TAF15
SCN11A
WDR48
NXT2
INTS8
RPH3AL
ZNF875
SRPX2
VIRMA
GFM1
SCYL3
CZIB
NDUFB7
TNFAIP1
IFT20
DYNC1I2
ANKRD17
SLC7A11
CACYBP
TMEM41B
MYO9B
HAUS8
DDX21
ZMYM6
SLC35E4
SULT2A1
FBXW10
CLUAP1
CFAP20
TNPO3
THOC5
DSE
RSL24D1
POC1B-GALNT4
POC1B
ZNF668
ZNF646
ISG20
ENDOV
COA3
CNTD1
TSPYL4
DYNC2LI1
ZNRD2
CDRT1
SLC7A8
CCDC130
MRPL44
ZNF302
CALM2
DYNLRB2
TOMM22
PRKAG2
CCDC90B
NUCKS1
PEAK1
HMG20A
ERLIN1
SLC25A45
NUFIP2
ARHGAP24
MSANTD3
ACP3
GAP43
CBWD5
CBWD3
PHIP
CBWD6
ZNF529
ZNF268
MAST2
ZNF2
SLC35F2
PLPP5
ZNF223
UCHL1
TTLL12
GOLM2
NBPF1
SNRPD3
GUCD1
FAM13A
RAD52
ABCA3
LMAN2
ZNF791
ZNF490
ZNF254
MRPS10
RHNO1
FOXM1
TMEM102
ZCCHC4
C2CD5
RPS13
SLC27A4
GSN
RSPH3
CTH
KHDC4
HDAC5
DIMT1
ZNF624
ZNF225
PTCHD4
FRA10AC1
CCAR2
PARK7
MCOLN1
CSTF1
AURKA
TAF7
PSD
ALKBH2
LINGO1
SULT1C4
RAB6D
F2RL2
CYP4X1
ATP5MC3
RRP15
UBE3B
KCTD10
TMEM39A
TTC21B
TXLNB
SLC25A16
RPL10A
UBL7
SPAG9
TYW3
CRYZ
ENDOG
SRP54
RAB3GAP2
MCAT
RNASEH1
PSMA6
PLEKHA7
CEP85L
TMBIM6
MDC1
BCL2L13
LIN54
PCM1
ZNF497
IMP4
CCDC115
PPP2R5C
HP1BP3
MTREX
DHX29
ANKRD13A
ZFYVE26
NFE2L1
GLIPR1L2
TM9SF4
ERI1
ABCB8
SLC18B1
PIH1D1
SLC16A13
TOR1AIP1
CHMP7
VPS26C
PA2G4
MZT2A
PWP2
LOC102724159
PCNX3
DYNC2H1
LRRC46
GPN2
EYA3
SDHC
MAP3K11
RPP30
ANKRD54
SCAND1
ZNF391
NDUFC2-KCTD14
NDUFC2
TRIM41
CGGBP1
C3orf38
RPL22L1
RNF220
PROS1
TAF11
FBXO46
TXN2
TXNDC17
KIAA0753
CDCA3
MSH2
ANKS1A
LMNTD1
RPS14
DCLRE1B
AP4B1
ATG101
LTN1
PSMA1
MTHFD2L
BOLA2
SLX1B
SLX1A
BOLA2B
VPS25
BOLA2-SMG1P6
FKBP8
KBTBD3
AASDHPPT
CCDC43
NAV2