ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX671999 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◣ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

ARHGAP39
ZNF718
ZNF595
PDE4DIP
NBPF1
GAGE2A
GAGE12I
GAGE12E
GAGE12D
GAGE12C
GAGE12G
GAGE12F
GAGE6
GAGE12B
GAGE12H
FANK1
SHTN1
SCARB1
NOTCH2NLC
NOTCH2
ASMTL
CBX1
GAGE2E
GAGE2D
GAGE2C
FAM86B2
NOTCH2NLB
NOTCH2NLA
NEFH
SIMC1
ZBTB11
DTX2
MORF4L1
ARHGEF35
DUX4
SDHAF2
CPSF7
HADH
GAGE7
GAGE5
GAGE4
GAGE2B
CEP350
GAGE8
CD47
DHRS4L2
ZNF84
RAB3IP
TIMM23B
PARG
C2orf69
PPP2CA
CENPVL3
SLC25A13
RANBP17
LIMD1
PGLS
YY1
POTEB3
POTEB
PPM1D
HERC2
HK1
THOC3
PPRC1
SUGP1
MAU2
CCZ1
CS
CHRFAM7A
RIMBP3C
RIMBP3B
FAM156A
FAM156B
CBWD5
CBWD3
CBWD6
LONP1
CATSPERD
NOMO1
DGKE
STX17
C17orf67
TCEA2
TIMM23
PSAT1
RAB35
CLINT1
ANKDD1B
MKRN2
CZIB
SLC25A32
DCAF13
TIGD6
HMGXB3
CCZ1B
CLTA
ZNF717
FIGLA
ZFP91
NBPF15
LPXN
BRMS1L
ZNF843
ABHD2
ZNF396
HBEGF
MTMR6
ASNS
CCNL1
GRPEL1
LOC100289561
DNAJC3
CENPVL2
CENPVL1
PCSK6
RABEP1
BOLA2
SLX1B
SLX1A
BOLA2B
THAP10
LRRC49
PAK2
GALNT10
REXO2
GRK7
TICRR
TENT5B
MSX2
PIWIL1
SERP1
EIF2A
ARHGEF5
GAGE13
MYO5A
FNBP4
RPS5
LYST
ANKFY1
LMNA
TADA1
FBXL5
SLC35G1
GSPT2
ENO1
CMTM3
LZTS3
BTRC
PPP2R5C
RPL35
ARPC5L
ZNF706
IFI27L1
DDX24
CCN3
SUSD5
TMEM30A
PIK3IP1
C9orf40
AP3B2
LAPTM4B
DHX15
TEC
CR2
ATP8A2
OR10AC1
RAB7A
FIGNL1
CERS5
WDR45
H1-8
WASHC2C
TAF4B
CASC3
MTR
PAAF1
COA4
ARHGAP26
ECE1
TMEM115
LYN
UVRAG
DR1
PDXDC1
UBE2Q1
THOC2
RAD51D
HERC3
PYURF
PIGY
GPR89B
TMEM41B
CRH
FAM86B1
TTBK2
CTSL
MAPKAPK3
ZNF443
MXD1
ZNF346
ZFP2
SLC35G5
NOTO
LOXL2
HMGB1
USPL1
BOLA2-SMG1P6
CHGB
PTPA
CRAT
SEC61B
CRELD1
ROPN1
GTPBP4
HIC2
M1AP
PLPP5
ILRUN
CALCOCO2
ZNF823
IP6K1
MAGEA8
RUVBL1
EEFSEC
ZNF451
YAE1
NDEL1
MACIR
TESK2
TIMP4
XAGE1B
XAGE1A
JMJD1C
YWHAG
SRGAP1
HNRNPM
MCM6
MATN2
VASH2
EMP2
SLC25A28
NAP1L3
FAM133A
CEP135
TMEM60
PHTF2
ZNF384
TRIM37
ADCK1
MON1A
UBR7
GON7
POM121C
MCTP2
PRKAR2A
HACD3
GPC3
LMTK3
TMEM163
GAGE12J
SERBP1
ZNF416
PDK2
RNF149
POTEH
MEGF9
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
RAB5B
MIS18A
FH
ROPN1B
SOCS3
TPT1
COPZ2
FAM111B
DEFB124
SNRPD3
GUCD1
PDGFD
PACC1
ZNF354B
KBTBD8
IL17RA
RNF7
IPO7
DLEC1
LRRC8C
RPN2
CFAP206
MROH8
CAD
UBE2L6
TMEM63B
MRPL14
NHLRC1
ZBTB8B
SHISAL2B
CEP112
FAM234B
CASR
FBXO39
ERN2
CEP126
POLD3
SCOC
SRSF2
MFSD11
NF2
CYTH2
PLAG1
CHCHD7
FAR2
RAB31
RPL22
ANKRD36C
ZFYVE27
ZBTB39
NEDD4
INO80
C8orf76
SNX27
IFNGR1
ZXDC
TTC12
FLNB
IRF8
FFAR4
KRTAP2-1
CDCP1
MOB4
SEMA4B
CRTAP
SLC7A6
POMK
JAK2
DEPTOR
ZNF778
HIF1A
EIF3F
RABGEF1
SRSF9
DYNLL1
ALS2
MICOS10-NBL1
MICOS10
ADO
ZNF672
GMEB2
SYT15
LOC102724488
SPINT1
INSL6
CT47A9
CT47A8
CT47A6
CT47A5
CT47A4
CT47A3
CT47A2
CT47A12
CT47A11
CT47A10
CT47A1
TBPL1
TRPC4AP
RHOG
CSRNP1
RPS4X
RPS27L
CAPN7
FAM76A
MPDU1
LOC100996842
NT5C3A
FUCA1
USP33
PSAP
CHRM3
TOR3A
IVD
STAG3
GPC2
XBP1
CTNNAL1
TTC9
PJA1
RIPK4
TMEM222
METTL8
DCAF17
DMTF1
TNIP1
GTF2A2
ALDH3A2
SLC22A5
LUC7L
BICD1
SLC30A10
KRI1
B3GALNT1
ERICH2
ZNF514
CDH22
ANKRD36
SMG1
DPY19L4
HDAC1
UBXN4
SAXO1
RRAGA
GNE
HACE1
RIPK2
GNPNAT1
THAP5
DNAJB9
UBA2
DUSP22
ACO1
PTBP3
FIP1L1
EID1
ZBTB43
SCYL2
DEPDC4
BVES
NPTN
RAB24
PRELID1
MTMR3
IGSF8
C6orf62
SLC13A3
TMEM47
ATCAY
ANGEL1
RTN4
STK40
CAAP1
PJA2
GMFB
DLC1
TBC1D5
DIXDC1
DNAJC13
NOMO3
SLF2
COPS3
PRRG4
CLDN1
OPTN
CCDC3
STMN1
MAL2
SLC7A2
HAAO
NODAL
PSMD8
RASL11A
EFR3A
PREB
UHMK1
GALNT3
FBN1
MIER1
USP3
NFYC
FGD4
FEM1A
MND1
TSKU
PPM1A
LSM6
FARP2
DNAAF2
NEMP2
P3H2
CSNK1D
TMEM263
UCK1
DUSP3
ZNF287
C1orf216
C8orf34
CORIN
ABCC6
MGLL
NGRN
ARL17B
ARL17A
KIAA0319
ZNF134
SAFB2
SAFB
RAB4B
C14orf28
MAPKAP1
UQCRFS1
ICA1
NEK5
RAB22A
SEC16A
SYT13
SPDYE14
SPDYE10P
CASTOR2
ZNF75A
TIGD7
RTL10
GNB1L
PPP4C
TMOD3
KIAA2026
KCTD8
MAN1A1
BMPR1A
PHC3
FAM189B
SH3D21
CST3
CCDC136
SCAND1
TAF5
KIF2A
ARL2BP
ACAT1
LRRC58
SLC36A1
SCAF11
DDT
KTI12
UNKL
BTF3
SLC30A9
CFDP1
RLN2
SLC7A1
NF1
NPAP1
CLK4
SLC25A51
IPO4
IREB2
RAB1A
SYAP1
GHITM
CORO2A
L3HYPDH
JKAMP
SMARCE1
EFR3B
SIRT2
NFKBIB
PPP1CB
FOXRED2
SEC11C
VANGL2
POLI
KCTD13
SLC4A8
DDX17
FAM193B
RPRM
POLR3H
TRERF1
RIC1
TTC28
KCNMB4
USP44
GAS2L3
GALNT6
BICC1
NPY
WTIP
ANGPTL4
PDLIM3
SNX18
ZNF786
BRSK2
CT45A10
PSMG2
CEP76
RIMBP3
PODXL
AACS
ACTR3B
ACVR1B
TAMALIN
DYNC1H1
ZNF782
MID1
SEC14L2
HBZ
GTF2H2
SNX17
EIF2B4
ARL8B
PKN2
FBXO11
SEC61A2
COX5A
ERMP1
RBCK1
OSBPL1A
HPCAL1
MXI1
DTNBP1
GAB2
CBR3
MOSPD1
MERTK
MIEF1
RCL1
C10orf53
CDS1
SLC5A3
MRPS6
TTC8
SNX33
EDNRA
GPR26
CTAG1B
CTAG1A
C7orf26
ZCWPW2
AZI2
SPECC1
MTIF3
GATM
KIF2C
HOMER1
DYM
BBS2
NECTIN3
ADAT1
DAAM1
CDCA7
PAXIP1
PHETA1
TMEFF1
GJC1
MAD1L1
TACC1
ORMDL3
NUTM2E
AMMECR1L
TCP1
MRPL18
MTRR
FASTKD3
CGB8
RPS20
PSMD6
SMU1
STXBP3
DUSP12
SMG6
RNASEH2C
SULT1B1
SRR
MTCH2
ASH1L
RNF135
ZNF607
ZDHHC13
PRKD3
USP20
C9orf78
CHST14
FAM219B
SH3BGRL3
ACOT6
AGFG2
PLLP
SNX6
HPDL
MOXD1
CDK18
SLC5A8
SLC15A1
KCNE4
TMED2
PDE12
PCYT1A
PPIL2
EEF2K
RMND5B
PURB
REV3L
SLAIN2
CASP7
TSTD2
NCBP1
CDC14A
FZD4
ITPR2
SLC7A5
RNF32
NRXN2
DYNLT1
ST3GAL6
IL17RD
RCN1
ALOX5
HMCN2
GLP1R
PIP4P2
LRP6
VWA8
DDX5
CEP95
HM13
HECTD3
KBTBD7
RXYLT1
SEC62
HP1BP3
OSBPL3
PCCB
MAP11
SPA17
SIAE
DENND2B
THUMPD2
JTB
GCDH
AKIP1
PCMTD1
LHFPL6
BDNF
MMP28
ZNF418
ACOX3
ATF7IP
VRK2
SPG11
EFCAB14
SPRYD7
MAP7
DCTD
PLAGL1
GMCL1
IQSEC1
LGALS8
MATR3
UBE2D1
WIF1
HDHD2
TPST1
DHRS4L1
SPTBN1
ACTL6A
IFT22
SRPK2
GLRX5
SENP7
RNASEH2B
EFCAB6
WDR59
ARGLU1
STK33
NPY4R
TVP23C
CMBL
CYP11A1
H3Y2
GAS7
FAM110B
RFTN1
RHBDL3
SART1
GTSE1
PPM1L
CLDN23
DYDC2
DYDC1
SLC22A17
TPI1
MGAT3
NSFL1C
AKIRIN2
GDI2
IL12A
PCMTD2
UGP2
POMT1
GNG4
ELOVL7
PLPP3
H2AX
HSD11B2
NRROS
JAM2
SSTR2
CHD1L
PIGW
MYO19
UBE2L3
KANSL1
RANGAP1
RPL10A
TCHP
SMAP1
UBIAD1
SELENOK
MRM3
GLOD4
RCHY1
UBR4
ZNF700
PPP2R1A
SEPTIN9
C2orf73
DPEP2
CSNK2A1
DCTN1
DPYSL3
FBXW9
ZNF200
CAMSAP2
IGSF11
GLCCI1
GRK3
SYBU
SPATS2
PSD3
KPNA2
PRDX6
YRDC
C1orf122
RLN1
GPD2
MARVELD1
RALGAPA2
ABHD6
SMC1B
RIBC2
ARHGEF28
ESYT3
SYN3
BEST1
FBXO25
ANTXR1
DCLK2
KCNH5
WASF3
KCNE3
TNFRSF8
PLEKHM1
MFSD8
ABHD18
SCP2
USP15
QSOX1
ANKRD36B
RNF19A
TDG
EEF1A1
ATXN1L
MRTFA
LSM5
AVL9
DCUN1D5
MYL12A
DNAH14
BAZ2B
CFAP92
VAC14
SPAG1
HYAL1
TOM1L2
DRC3
PGAP4
UGDH
DDX3X
LRRC32
C3orf62
IGFBP6
EFCC1
TRAPPC8
DSE
DUS2
DDX28
SLC39A9
ERH
AGBL2
POR
NUP153
TRRAP
PHF3
TBCA
RUBCN
XPOT
WDR12
CARF
TASOR
MRM1
NCK1
TMEM192
STK38L
DUSP23
DDTL
MCM3
RGS10
SQLE
GCH1
TMA7
CCDC51
PELP1
CYP46A1
KRTCAP3
ATG16L2
IL15RA
HDGFL3
SURF2
SURF1
PHYH
C5AR2
TMEM215
FBLIM1
HUS1
ZMYM5
PHB2
EIF1B
STAT1
KCNH1
YARS2
CYB561A3
TMEM138
XPC
LSM3
NUP133
ZNF326
CAPRIN1
WASHC2A
SRPRB
CLCC1
TMX3
CCDC102B
PAPSS1
PHF14
INPP5A
MRPS30
CUTC
COX15
SYNRG
NOMO2
C9orf85
ABHD17B
GALC
ZNF324B
UHRF1BP1L
FAM151B
OSER1
CHUK
YY1AP1
DAP3
C17orf64
PIM1
SPOCK3
SOX2
DEPDC7
AQP11
MST1R
PRXL2A
ZDHHC1
FAM107A
DSTYK
EDC4
POLR3G
MBLAC2
ADPGK
ARHGAP22
RAB6A
PFDN4
NR2C1
TNPO1
MTHFD2
CSRNP2
XPA
TRIM52
EIF3C
ABHD12
EIF3CL
NLRX1
AHCY
SEC24A
PTPN23
LRRFIP2
MANBA
PGM2
CYSTM1
C1orf109
MTDH
PAICS