ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1945294 | hESC WIBR3
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◣ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

RAB37
HLA-DPA1
YPEL3
BAGE5
BAGE4
BAGE3
BAGE
TRPM3
BEST2
BAAT
PCGF3
PIK3R1
KSR2
KCNJ15
FAAH
HTR2C
ZNF611
GFI1B
RTN1
MAP4K5
BTD
ITGB3BP
EFCAB7
CCDC126
SLC25A38
PHOSPHO1
ZNF605
PROS1
MCC
IQSEC3
KCNJ2
GPR39
EDEM2
FAM104B
AKAP10
ZNF562
PRKG1
ZCCHC8
UBXN2A
C2
TKTL1
TEX28
ACTL10
SLC30A8
SNX16
FUT3
S100A4
ACYP2
TBC1D8
TBC1D30
FRMD4A
FEM1C
DEFB124
UBE2O
AANAT
DPY19L2
NPFFR2
LAMP3
ME1
PACS1
ZNF114
KLF17
ST8SIA6
PGBD1
LOC728392
HRH3
PDE8A
ABCG1
NECTIN3
PSMB2
NFRKB
VLDLR
LRCH1
SLCO1B3
TRAK1
ZNF117
THSD7A
GOLGA6L2
SWI5
GOLGA2
RAB30
SEPTIN11
DLK2
YWHAQ
ANTKMT
ZNF804A
ZNF280D
TSKU
HCN1
PRKAA2
C5orf24
NOD1
ZNF44
CNKSR2
DUSP6
SAMD5
IKZF3
KCNK3
LYPD1
SULF2
CEP72
MERTK
CDC42BPA
ARHGAP44
EYA1
TMEM52
H2BS1
ZNF426
HDAC2
EBF1
ARHGAP22
NIPAL1
CNGA1
CMTM3
EIF4E
VSTM5
TMEM131
TSPAN14
PANX1
APLN
CNTNAP3
GTF3C5
DGKK
PTPDC1
CNTNAP3B
PAM
PIP4P2
EPHA5
LY6L
KCND3
SAV1
SLITRK4
TACC1
NUDT4
NUDT4B
PLOD2
NR2F1
ZNF160
MEST
NOVA1
SLC8A3
CCND1
NOS3
UBLCP1
KCNE1
NTM
MAP4K3
TGFB1I1
PRELP
CEP85
PCGF6
FZD3
RBMS3
RNF144A
TADA1
SEMA3D
FABP6
ZNF211
ZNF860
OSBPL10
ADAMTS15
ZNF561
SLTM
PDE6B
FSTL4
RIOX1
DCTD
CCDC74A
ZNF695
MAGEF1
C1QL1
SPIN2B
SOWAHB
NCK1
MYRIP
ESPN
FZD1
ATP12A
NEUROD4
CLUL1
PLD5
KLHL40
PDE2A
CAMSAP2
RFWD3
ZNF676
FGF18
LRRC45
CENPX
SLFN11
ACTR1A
SUFU
RRBP1
SST
TMEM40
SERPINF2
SIK1B
SIK1
EPS8L1
KCNIP2
LXN
SH3KBP1
UFSP2
SUZ12
CRCT1
PRRT2
ORC4
MBD5
NEGR1
LYPLA1
ST6GALNAC4
MRGPRX3
FAM25E
OPHN1
SPOPL
DHRS4L1
NAA20
PRUNE2
YAP1
RBPJ
DNAJC13
THAP4
ZNF324B
GALNT13
BTK
ADAMTS3
CD80
SLC17A7
FAM50B
ACBD5
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ZNF496
CCDC177
POLE4
SIGLEC11
KLF3
RNF220
PDE4A
METTL21A
PKMYT1
TMCO6
SCN4B
ANO6
STRBP
RAB6D
LONRF2
SMCO4
RYBP
GDNF
EEF1AKNMT
B3GNT2
SNCB
EIF4E1B
TEAD4
ANHX
EML2
ZNF563
ARF6
CT45A10
SATB1
PURA
PYCARD
KDM4E
PKD2
SCUBE1
VGLL3
FILIP1
TENM4
OLFM3
NRSN2
MAIP1
NFE2
MAST2
ATP2C1
CDA
FAM102B
GNG2
AGGF1
WDFY2
ZNF780B
NOS1
IL1R1
SLC35A3
CAB39L
SETDB2-PHF11
SETDB2
SSX2IP
DMRTA1
HIVEP1
SLC6A1
RFPL3
PDE11A
GUCY1A1
NCOA7
UBQLN2
DPP6
SEMA6D
FGD3
CLSTN2
NPHS2
PDE1B
VBP1
POTEF
FERMT2
ADAMTS5
TP53BP2
PXDN
FUT8
SCCPDH
CRH
SIX3
TMEM237
TRIM56
FAM240C
FABP7
PIK3CA
PTPRN2
TARS3
HINT1
KCNE1B
RAB23
ZNF521
SCHIP1
DHRS2
AMACR
CMPK2
PYM1
LRRC2
GABRA2
TDRD3
RBMS1
TAS2R4
GSTA4
GSTK1
SNURF
SNRPN
MAEA
ZNF888
ELMO1
LRP8
POTEE
DLG3
PLXNA4
STX2
OTUD7A
F8A3
F8A2
F8A1
ALAS1
KCNS1
RORA
PTH1R
ACSL1
NLK
GPR50
CYREN
GNL3L
OSBPL1A
GPC5
MXD4
CDH10
PABPC3
NRG1
RNF128
PAPSS2
CROCC
ZC3H14
GJC3
SORCS2
VRK2
CBLL1
MTFR1
ARID4A
UACA
BEND7
ART1
PCDHAC2
PARM1
MYOD1
GMFB
TMEM164
CT45A7
CT45A6
CT45A3
HP1BP3
CCL3
SLC27A2
BCL6B
ROCK1
CCDC74B
SETD7
NEXMIF
NR2F2
NUPR2
ABI2
PCDHAC1
ZFYVE21
XRCC3
IQGAP2
LCORL
RIPOR2
PIAS3
HERC6
GRAMD1C
SMIM14
TMEM60
PHTF2
ATP23
IKZF1
ADCY5
C3orf80
PAH
ASCL1
PPP1R2B
VN1R2
THEG
ATXN7L1
SPAG5
PCDHGB1
ST8SIA2
ADAMTS2
PLAAT2
MAOA
SP6
CMYA5
GDA
MAGEB16
FAM98A
EGLN1
ITGA7
TLK1
H3Y2
RABGAP1L
CAMK1D
DCLRE1B
AP4B1
CNOT6
STARD3NL
CEBPD
PAXBP1
OTUD6A
RPS6KA2
NFATC2
ZNF623
C9orf85
ABHD17B
SLC27A3
SNRNP25
POLR3K
TSNARE1
MEIS1
RGS7BP
JMJD1C
REEP3
ZNF778
GLI2
SNX33
NPNT
PCDH19
MTIF2
STIM2
PPIC
QSOX2
RNF130
RBX1
TEX13C
SHB
RAB6C
PRDM1
SDC2
PCDHGB6
NKX6-3
ADAM22
AHCYL2
FANCF
ERAS
CTSB
NDRG4
DYNC2I1
PIK3C2B
NDST3
CCL28
PHKA1
PPP1R1A
TUBE1
FAM229B
LPL
DMRTB1
SCMH1
TRPM4
LOXHD1
MSL1
IGFBP3
QSOX1
PROSER1
NHLRC3
CDH2
TIAL1
BECN2
CHST4
EPHX1
TMPPE
GLB1
APBB2
NCAM2
GOLGA8A
RALYL
ZDHHC22
PTPN5
ZC4H2
ZNF468
FAM171B
PLXND1
GALR1
CAMK2N1
CRLF3
BRD2
CAMK2D
CDYL
VANGL1
XKR4
NSMCE4A
RIPK2
TMEM182
ENTPD1
PIP5K1B
EGFLAM
LMX1A
KIF21B
KBTBD3
AASDHPPT
ZNF233
SPIN4
PLAAT5
PDE4DIP
KCNAB2
TMEM14A
RIMS1
DPH3P1
PAPSS1
MARCHF11
SGCG
ADPRHL1
SMAD3
TARM1
CPXM2
PCSK9
SOX11
CCDC200
WDR74
BSDC1
MTRNR2L2
MTRNR2L8
GBA
RABGAP1
CBX1
NUF2
RBBP5
RPS7
MTF2
SSBP1
STX16
DMAP1
NOTCH2NLC
AURKAIP1
NOTCH2NLB
NOTCH2NLA
LUC7L2
FMC1-LUC7L2
SAMD4B
SF3A3
PUM1
ARHGAP39
MED23
NDUFS7
NME1
COX16
TTLL12
CCDC130
PEX3
ADAT2
RPS29
TMEM41A
EIF2D
INTS12
GSTCD
TMEM242
DCP1A
RPL27
KMT2A
ZMPSTE24
FRA10AC1
PPIG
FMC1
DCAF10
MRPL44
MAPRE2
GDPGP1
CIB1
HMGB1
NDUFB3
FAM126B
DSTYK
NPAS4
USPL1
SKP2
LMBRD2
FAM227B
DTWD1
ACOX3
TBC1D19
TRIP4
ZFP30
GTF2H2
STX18
SELENOH
TMEM70
TOP3B
SLC24A1
TRMT44
POLR2J3
TTC32
DPY19L4
PRELID3B
RPL37
DRG2
ATP1A1
TOR1AIP1
SLC33A1
COMMD2
PAFAH2
DNAJC25-GNG10
DNAJC25
TARS2
MRPS31
POLR3B
PPIP5K2
SMARCD2
CLK4
METTL25
CCDC59
ZNF408
ARHGAP1
ALG10B
TFPT
PRPF31
YTHDC2
RERE
UTP3
NSFL1C
SLC25A51
SLC44A1
RBBP9
DNAJB12
CAT
GTF3C3
FRG1
IPO4
RPS14
SFT2D3
ANKRD54
RAD54L2
EIF3F
GTF2H4
INTS5
VTA1
NMBR
EPS8
ATF7IP2
BCAR3
SMG8
LSG1
GTF2H2C_2
GTF2H2C
SUPT7L
SLC4A1AP
MRPL40
HIRA
GOLM2
HTR5A
STAT3
ITGA4
REXO4
RTTN
SNIP1
INO80C
TEFM
EIF1AD
BANF1
BMS1
C3orf14
PPP6R1
CDK5RAP1
TACO1
RNF187
ZNF829
ZNF568
DRAP1
C11orf68
TDP2
ACOT13
RILP
SNAP47
NEMF
SCAND1
PSMF1
ATR
USP30
KDM3A
COPS7B
NBN
FAM207A
TMEM43
CHCHD4
SNX17
EIF2B4
MTERF4
MRPL21
IGHMBP2
JMJD4
TRUB2
COQ4
ZNF391
WDR11
TATDN3
NSL1
TMEM222
ILF2
MTRNR2L9
FGFBP3
ATP5MC2
KANSL3
SLC29A2
WDR36
ZNF540
DUS1L
TTC26
SAR1B
MOB4
MRPS18C
HELQ
FAM133B
MRPL1
ZNF571
ZBTB45
CCDC97
HSPE1-MOB4
HSPE1
HSPD1
WDR43
DPP9
KLHL20
GALK2
ZNF226
C17orf75
IST1
ZBTB40
SCNM1
LYSMD1
POLR3E
GTPBP3
CD47
TMEM68
TGS1
MMP7
KIAA1549
GFM2
CPPED1
TUT1
GABPB2
WDR55
COPS4
DDX18
CTNNB1
MRPS23
KDM1A
SMG5
BNIP1
CHD1L
SEC13
ZCCHC4
SNRPB
MRPL48
RUVBL1
GRPEL2
NDUFS3
KBTBD4
NR1H3
ACP2
ATF7IP
TTI2
RPS20
NUP54
CBWD5
TPR
ODR4
ZSCAN25
STAU1
ZNF609
MAN2C1
POLG
CFAP298-TCP10L
CFAP298
TPM1
C8orf37
CCNC
CBWD3
TMEM101
TTC4
MNAT1
PRPF18
FAM228B
B4GALT7
NOTCH2
ADRM1
KLHDC9
MRPL30
MITD1
RMND1
ARMT1
TSGA10
NOP16
HIGD2A
ADPRS
METTL9
SLC39A13
HNRNPD
EPRS1
EIF3E
TPK1
SF3B6
COX7A2
GMPS
PSRC1
THAP11
PSMD6
CCAR2
MTBP
MRPL13
CCNI
SUGCT
MPLKIP
SDHAF3
BRF2
TSFM
PSMD3
HUS1
LOC102724265
CASC3
ALKBH3
ING2
COPS2
MED18
PHIP
TIPARP
PIGW
MYO19
PARP2
OPA1
CENPV
BRWD1
SMU1
NCBP3
SNRPD1
AGK
CDC73
TGFBR2
ZSCAN31
MRPL3
BCL9
CYP17A1
SNRPB2
MTR
PLEKHM3
SRRM3
EXO5
TRMT2A
RANBP1
CLTB
GORASP2
NECAP2
N4BP2L2
TTLL1
VIRMA
MLEC
CRKL
SACM1L
FAM98B
CLUAP1
C18orf21
TRMT5
SLC38A6
AARS2
CBWD6
RBM45
RAB18
SESN1
RPL26L1
TTC13
PRKAB2
ARV1
CDK19
HAX1
ZNF292
SMG7
ZSCAN30
SNRPE
TIGD1
EIF4E2
ZNF76
MAGOH
CLTC
R3HCC1
LRP6
COA6
RPS15
C2orf15
RBM28
PIH1D2
NKAPD1
STOML2
WWOX
MRPS14
U2SURP
VPS13B
ALG10
INO80B
ANKRD40
ANXA2
C10orf88
CALCRL
CEP120
PDCD6IP
RPL5
STX6
SEC23B
CEP57L1
MRPL16
SMIM13
NFAT5
SUGT1
GSPT1
KMT2D
CEP85L
CCDC88A
DDX1
NOXA1
MRPL39
GABPA
ATP5PF
HLA-E
BANP
ZSCAN22
DGKZ
CASS4
ACTL8
NMNAT1
LZIC
RNF6
PPP2R5B
NDFIP1
FAM234A
PRIM2
MAPK1IP1L
KRR1
DHX16
ZZZ3
MEMO1
NBPF1
CCDC150
ITGAL
ATG101
PUS10
PEX13
ZNF165
SNRPD3
GUCD1
MRPS33
RNF125
YTHDF2
AAR2
PTPN4
PRMT5
FBXO22
WDFY1
TRAM1
TMEM65
GNB2
CDIPT
LRRC37A3
HNRNPA1L2
RPS19
GLIPR1L2