ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457587 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◣ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

BSDC1
PPIG
CCDC200
RABGAP1
PRAME
LUC7L2
FMC1-LUC7L2
FMC1
SAMD4B
ATP1A1
YTHDC2
ATF7IP2
TMEM41A
KCNJ15
YPEL3
CCDC130
PPIL2
CBX1
ZNF562
TMEM43
CHCHD4
RBBP5
ST6GAL1
PRELID3B
SNIP1
LZTR1
ZFP30
AURKAIP1
ZNF623
NUP214
ITGB3BP
EFCAB7
TRUB2
COQ4
TOP3B
GFI1B
TSC1
FAAH
GTF2H4
DQX1
MRPL40
HIRA
NDUFS7
FAM234A
TRMT2A
RANBP1
CRKL
RBL1
JMJD1C
REEP3
MAPK1
CLK4
CEP85
POLR2J3
SLC35E2A
MARCHF2
TTC32
CDK19
AMD1
STAU1
RCCD1
ANKRD54
PCBP2
ARHGAP39
FEM1C
MED23
GP1BB
UBE2L3
ZNF408
ARHGAP1
PIH1D2
NKAPD1
RPL26L1
TNPO3
LOC102724265
SMIM13
UFD1
CDC45
COPS4
WASHC2C
CCDC116
SSBP1
TMEM259
ZSCAN25
SFSWAP
KAT5
SF3A3
ADAR
STX16
C9orf16
NME1
RNF187
MAN2C1
EIF1AD
BANF1
FZD1
PAFAH2
DNAJB12
RPS29
MAPRE2
GNB2
THAP7
PPM1F
SUPT7L
SLC4A1AP
TTI2
GCFC2
MRPL36
SNRPE
MRPL42
ZMPSTE24
ALDH3B1
NOS3
GRPEL2
ASCC2
EIF2D
SUPV3L1
TFPT
PRPF31
BAG6
APOM
PTPA
CRAT
SLC24A1
GABPB2
WDR47
TMEM242
POLE4
SELENOH
CCNI
CENPN
PGBD2
TRMT11
PRPF3
AHCYL2
SLC7A6
PLD3
C19orf47
CHAF1A
ZW10
RGL2
ZC3HC1
KCTD9
CDCA2
ST3GAL4
YWHAQ
DSTYK
PKMYT1
HLA-E
YPEL1
TPR
ODR4
POLG
RERE
ZNF165
CRBN
GPR3
MED15
PRIM2
ZCCHC7
SLC27A4
RPS7
ACYP2
MRPL11
HSPBP1
ANKRD36C
CMIP
UTP3
AARS2
RPS15
SMU1
CDIPT
ZNF74
SEC24C
ZNF529
ZNF554
C7orf25
TSNAX
TMEM191B
NUF2
REXO4
PLK3
DNAJC14
NFYC
VTA1
NMBR
PPP6R1
HUS1
EIF1B
APRT
KLHL22
FGFRL1
MMGT1
WDR43
CEP164
PAXBP1
RPS26
NUP205
OGDH
SDF2L1
GSTA4
FRG1
TMEM216
TOR1A
ABCB8
LMNB2
TUBAL3
GOSR2
ZNF436
ZNF280A
MAGOH
ZNF808
PARK7
P2RX6
FAM220A
GK5
LMAN2
FAM25E
FAM160B2
N4BP2L2
PDCD6IP
CCDC88A
QRICH1
NDUFA6
TMEM128
CNTRL
IREB2
C5
SPRING1
RNFT2
WDR74
FAM207A
BAIAP2
KCNH1
ZSCAN21
ATAD2
LTN1
RABIF
RNF216
SAYSD1
SYS1
ZNF282
TMEM219
METTL25
CCDC59
RBBP9
KDM3A
RBM28
CYB561D1
RIF1
PRKCSH
CCDC151
CCDC12
TMEM222
SUGCT
MPLKIP
HNRNPH1
SNAP29
PI4KA
MST1
PPP6R3
CWC22
DHX8
NDUFA11
VMAC
SMARCD2
INO80C
INO80B
ZNF3
GDPD5
ZBTB6
VAC14
GAGE2A
GBA
DCAF10
KLHL20
DHX40
SLC44A1
NECAP2
BANP
ZNF585A
DISP3
ACOX3
TRMT44
BMS1
MTR
THOC3
DPH7
SRP19
MAP2K1
NR2C2AP
IPO4
WWOX
PFDN5
TCAIM
HIC2
SMG8
DCLRE1B
AP4B1
MRPS15
MARCHF7
YDJC
VPS52
RPS18
TCTEX1D4
BTBD19
CNPY3
RPL37
TMEM101
DHX16
IBA57
PRKCI
NEU1
DGCR8
PSMC3
MRPS18C
HELQ
TPM1
ZSCAN22
UFSP2
ZNF268
TMCC3
GUSB
CHMP4B
AASDH
ZNF212
BRPF1
RNF146
DBF4B
CAMK2G
PKD1
VARS1
DTX4
VPS13B
TRIM5
KIF15
KIAA1143
POC1B-GALNT4
POC1B
KLHL18
KIF9
PHF12
AGBL3
DYNC2I2
CCNL2
KRTCAP3
DMAP1
RBIS
PPP1R8
LEMD2
EEF2K
SPATC1L
FAM20B
PLEKHG2
H6PD
FNDC3A
EIF3F
GTF2H5
NSUN4
IPO13
TMBIM1
PPOX
SEC61A2
RAB3GAP2
SPACA9
AK8
TSC2
NTHL1
AXDND1
ZNF714
CRTC1
CASS4
DDX27
ZNF398
YJU2
RBM48
PEX1
N6AMT1
ZNF425
RRP9
PARP3
CACTIN
TP53I3
ZNF649
CDK5RAP1
ZNF391
NDUFS3
KBTBD4
PRPSAP1
C12orf73
SEC22B
VWA7
AK2
TFEB
ZDHHC12
TANGO2
ZNF561
SACM1L
TSSC4
DTWD2
COMMD4
TBCB
POLR2I
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MRPS33
C19orf48
NOL8
CENPP
DLD
RBM45
WDR70
PRMT3
CCDC124
TIMM50
PDE4A
RPL7L1
WDR4
STX4
CHMP4C
MRPL30
MITD1
ADPRS
HMGN4
NBEAL2
PDCL3
CBWD5
CBWD3
CBWD6
SH2B1
VPS33A
RTL10
GNB1L
LEO1
ZNF558
POLR3B
TARBP2
PMS2
AIMP2
TRIP4
DPY19L4
SNAP47
JMJD4
SMG5
INTS4
MEGF8
HDAC1
ARNT
CGB2
RPL27
MRPL44
MMACHC
FUT10
PMF1-BGLAP
PMF1
TNXB
ZBTB40
TIPARP
KRR1
PSMB7
TAS1R1
NOL9
ZRANB2
BLOC1S5
TAF1C
MEF2A
SNX15
RNPS1
SKP2
LMBRD2
RRP15
MCOLN1
SLC25A16
TENT2
BBS1
DGAT1
ZNF426
PPIH
RBSN
TTC21B
C1orf74
SPIDR
DDX50
B3GALNT2
ERMAP
SEC11A
CCDC83
WNT11
NBN
MED18
SMG7
PPP5D1
CALM3
DIDO1
GID8
MTLN
C19orf53
NRBF2
BUB1B
NBPF10
FAM13A
STAM2
ZNF684
HK1
SPPL3
ASB6
CCS
CCDC87
RNF121
LOC100133315
CSTF2T
ZNF180
RPAP1
TTC39A
CCAR2
R3HCC1
TMED1
STAT6
RPA2
ZNF566
ZNF221
MAP2K7
RFX1
RPS10-NUDT3
RPS10
MTF2
ZNF846
UBQLN4
LAMTOR2
ZNF805
GNL3L
RHEB
SCAP
OR8G2P
C2CD5
TRIM41
TM2D1
NUP133
EFTUD2
CCDC103
PDAP1
BUD31
METTL6
EAF1
TTC31
CCDC142
E2F6
MRNIP
WDR13
CASC3
PCTP
RIPK1
MADCAM1
ADRM1
TIGD1
EIF4E2
LTA4H
TM9SF4
METTL26
RPF1
CSRNP2
CFAP36
UQCRQ
GDF9
AKR1A1
OSBPL7
TMCC2
ZNF487
SPOCD1
SLC25A1
SCAND1
ATP5MC2
SEC13
AGK
ZNF510
RSPH3
DAXX
HNRNPF
CDK7
ZNF565
DDX39B
ZNF146
ZBTB45
DPP9
CCNC
INKA2
DDX20
PLEKHM1
SRFBP1
FAM168A
MICOS13
HSD11B1L
BCAS2
CHFR
CPPED1
NBPF1
DHTKD1
SLC35B1
PTCD1
CPSF4
SEM1
SIRT5
PEX3
ADAT2
DCP1A
RPS14
WDR55
SLC39A13
COG2
MTOR
SMIM12
ERMARD
SSNA1
ANAPC2
PNO1
ZNF442
SEPTIN5
GTF2H2
TOR1AIP1
ATR
ILF2
BTD
CDK12
ANKRD36
GFM1
WDR62
THAP8
THUMPD3
CPT2
MED16
PXMP4
TIMM13
THEM6
TBC1D19
SLC29A2
BRF2
CCDC174
SREK1IP1
CWC27
ZNF383
KXD1
PPIP5K2
PSMA1
MRPL38
ZZEF1
CYB5D2
SIKE1
MVB12A
STRIP1
ZNF576
IRGQ
IFI6
RABGEF1
ADO
GORAB
RAB8A
FAM228B
SF3B6
SIRT4
NIP7
COG8
RRP1B
HSF2BP
NAPA
ATP5MF-PTCD1
ATP5MF
ABCF3
HACE1
ZNF546
SGO1
GRIPAP1
TENT5B
NR1H3
ACP2
SLC35A3
PLEKHM3
CYREN
DHDDS
ACVR1
ABCC10
MMUT
CENPQ
ITSN1
CRYZL1
IL18R1
POM121
BLOC1S1
LMBR1
GEMIN6
MRPL16
ATG4C
TMEM167B
POLR3A
DR1
DFFB
CEP104
SMARCAD1
EXO1
TIMELESS
TEX15
ATG101
CHCHD2
NUDT5
CDC123
UNKL
ALKBH7
INTS12
GSTCD
CFAP298-TCP10L
CFAP298
TTC4
TNFAIP8L1
CAMLG
RPL10A
ELAPOR2
CYB5B
TRMT10A
MTTP
HAUS5
SMIM30
ABCA3
CLPB
EEF1AKNMT
KPNB1
GPATCH3
EXOSC9
ZNF300
NUFIP2
PNPLA8
SPATA24
WFDC3
DNTTIP1
CIZ1
UBE2Q1
RIMBP3C
RIMBP3B
POLR1H
PDSS2
MRPL27
EME1
USP47
GDPD1
ZNF197
TLE2
RPL36
BCL2L1
DNM1
DNAJC28
YBEY
MCM3AP
DNAJC16
CCDC90B
CBLL1
CD2BP2
USE1
NDUFB2
SH3BGRL2
TATDN2
LCMT2
ADAL
FAM200A
SLC25A51
C8orf37
HAX1
PUS10
PEX13
PPP1R11
ZNF354A
STK40
DYNC1I2
BRAP
ACAD10
SKIV2L
NELFE
ABCF2-H2BE1
ABCF2
SCN9A
XKR9
LACTB2
DAB2
CDON
ZNF200
MUL1
RAB11B
RSAD1
FAM3C
SNX3
MAN2A2
EPRS1
GORASP2
METAP1D
SNX19
CDK11B
CDK11A
CENPF
HLCS
SLC35B4
PSMC4
METTL2B
EGLN2
USP36
TEFM
SCNM1
LYSMD1
GTPBP3
RALBP1
LRRC29
RETSAT
ELMOD3
SASS6
DHPS
TMEM39B
FASTKD1
SIRT2
NFKBIB
SMIM14
PEF1
ZNF628
GPR35
POLR3E
NMNAT1
LZIC
EIF3G
MRPL54
APBA3
NUTM1
NOP10
IMMP2L
IFRD1
TYK2
FUS
SYVN1
ECH1
TEAD1
NPFFR2
U2SURP
NR1H2
ATP5MC3
CHMP7
MRPL24
SUPT3H
DHX33
SMIM20
ADPRHL1
HOMER1
RPL23
HSPH1
HAGH
FAHD1
FAM149B1
ECD
STK19
DXO
ACTR3C
SCRN3
CIR1
GP6
OR4F21
MRPL1
ARL8B
DNAJB4
FANCD2
POT1
TIGD4
ARFIP1
AP5Z1
VIRMA
GSPT1
RCAN1
CCZ1B
PMVK
SLC25A19
NUDT13
FYCO1
DHX37
CDC73
MRPS14
ZSCAN12
MRPL45
RFXANK
BORCS8-MEF2B
BORCS8
MFAP3
FAM114A2
DUS3L
RIOK2
TMEM144
PRR5
PRRC2C
MGA
RNF113A
NDUFA1
PPP6C
UBE3B
KCTD10
TINF2
RTEL1
PCYT1A
TAF11
COG7
DARS2
CENPL
IDH3B
CUL7
ZNF263
SRD5A3
UBP1
BLCAP
RABEP2
RUVBL1
ZSCAN30
SERBP1
ARL14EP
LRIG2
GPR137
SDAD1
KLHL12
ZNF497
MUC1
SCN11A
CXorf58
WDR48
TOR1B
PAF1
MED29
GCK
PDE11A
RPL5
PPIL1
TCAF2
H4C3
C21orf58
OR2L13
FBXO8
CEP44
PRR19
PAFAH1B3
KTI12
SYF2
VPS37B
KLHDC10
OAZ3
SNRPC
EXOG
SLC9A8
CHD1L
PRKAB2
NUP107
ERCC6L2
SPHK2
RPL18
CDC25C
FAM53C
CTU1
LSM2
PTK2B
TRIM35
UQCC2
RPP38
SND1
LSM10
MRPS25
SLC66A1
AKR7A2
KMO
EIF2B3
RAB5C
TADA1
HDAC2
CCNT1
BCKDHB
GFER
KYAT1
GRWD1
ABHD16A
RBM34
THADA
ZNF655
SPAG5
FAM227B
DTWD1
ATF7IP
RAB30
ATP6V0D1
DNLZ
THYN1
ACAD8
NCBP2AS2
NCBP2
NEK2
PAK1IP1
C6orf52
DHX30
RMND1
ARMT1
RHOT1
ZBTB17
RFX2
DDX21