ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1177903 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◣ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FANK1
KLHDC4
CCDC200
TTLL12
POTEH
PMAIP1
CBX1
ZNF264
CANT1
EEF1A1
PDXDC1
MRPS7
GGA3
NDFIP1
H3-3B
FAM117A
ATAD2
FH
CACUL1
MPZL1
PHC2
ZSCAN25
SHOC2
BBIP1
TMEM71
PHF20L1
CYC1
BAG3
MTRNR2L8
AHI1
UBALD2
OXLD1
CCDC137
NBPF1
STX12
RPL38
ZFP91
USP10
NOTCH2NLC
FRG1
NOTCH2
LEMD3
GRB2
TRAP1
WASHC5
NSMCE2
ABRAXAS2
DDX17
SLF2
TCF7L2
ACSL3
CTAGE8
CTAGE4
KIAA1549
PDCD6
SMC3
REPS1
ZNF12
CCDC30
NACC1
ZMYND12
PPCS
THOC3
SMNDC1
UROS
BCCIP
DNAJB12
DHX35
FBRS
PAXBP1
TNFAIP8
ATG16L1
LOC100289561
PDE4DIP
SMAP2
ABCD3
NME2
CHORDC1
EIF3F
WDR43
CSNK2A2
ZNF717
SURF4
VKORC1L1
ZKSCAN1
ICE1
PCOTH
MIPEP
UBR5
MTRNR2L2
TACO1
DPP9
ZNF652
C8orf76
EXOC6
ATL2
IMMP2L
SPAG9
FBXO11
PLEKHA1
SEC61G
C10orf88
MCMBP
MTMR4
NDUFAF6
CCDC186
SPATS2L
PIGF
CRIPT
MTX2
BICD2
TEX10
PPA1
ZNF718
ZNF595
C7orf25
C15orf40
PKD1
PRKACB
LRRC47
ABCA5
SERF1B
SERF1A
CHKB
POMZP3
ABL1
KLF5
USP7
EFR3A
MSANTD4
TSPAN10
NPLOC4
MTHFD2L
RMDN1
TEPSIN
NDUFAF8
NOTCH2NLB
NOTCH2NLA
RPS15A
CLK1
GLI4
SAMHD1
PANK2
KRTAP4-8
KRTAP4-11
TADA1
ZNF326
SMAD5
SEPTIN9
DECR1
ARHGAP11A-SCG5
ARHGAP11A
BSPRY
ARHGAP39
HIPK1
CEBPG
EIF2AK3
IKZF5
ACADSB
WASHC1
ARHGAP29
IREB2
PREP
ASPH
EIF3A
E2F3
ZMYM3
ZDHHC6
VTI1A
TAF10
ALAS1
MSRB2
PKD2
ST14
WNT16
LATS1
DSCC1
RDH14
MTDH
RBM42
POM121C
MPP7
C8orf33
ECE1
PLEKHA3
GAN
CACTIN
ETNK1
PIK3CA
DYRK3
VOPP1
MYO5C
GPI
JMJD1C
COPG2
ADAR
NCBP2AS2
NCBP2
LSM6
REXO2
C16orf87
RPL13
PDCD4
RWDD2B
KRCC1
WAPL
SUMO2
FNBP1
RNASEH2C
SEC62
BFSP1
PDP1
FAM13B
PDXK
TM2D2
ADAM9
DSTN
COL4A4
COL4A3
SCYL3
PIGC
OAT
CLTCL1
SMARCE1
TMX4
CCZ1
SIN3B
PIP4P1
GSTO1
FAM234B
FBXO31
POMP
SLC45A4
CCDC138
ARF6
RBM22
SEC11C
SAFB
SAFB2
MRPL20
CBX2
VAMP3
FAM169A
RECK
MEIS3
SENP1
PFKM
SLC38A2
MRTFA
USP36
CASP2
PARP8
ETS2
SBF1
ACOX3
TRMT44
SMARCD2
NDUFAB1
ZCCHC8
YTHDF1
RALGAPB
TPT1
EHD4
DYNLL2
MICU3
RBPMS
MYBL1
GSK3A
CCDC25
ELOB
ACAA1
PLA2R1
DGKZ
PREPL
CAMKMT
LEMD2
PHAX
CRLS1
TESK1
WAC
ZNF706
NPC1
FERMT1
GPS2
PAWR
DUSP5
PLEKHF2
FAM124A
ZNF623
TSC1
SEC22C
SS18L2
MKRN1
IGSF3
TIGD2
PRDM4
WRNIP1
TMEM131L
RAB4A
TMEM245
PIAS4
USP33
LRCH3
DNMBP
RFT1
METTL23
JMJD6
CALCOCO2
RGS22
KDM1A
FAM83D
OXR1
CLTA
FLYWCH1
ARL8A
DENND10
ATP8B1
GJB2
RAB5A
EFHB
ADIPOR1
ARL16
HPS6
TMOD3
HGS
INTS8
TBC1D31
SLC25A37
ELOVL7
TBL2
RAB11B
DCUN1D2
SDR42E1
OSBPL5
YPEL2
RUVBL1
RAB18
EEFSEC
HERC3
UHRF2
MEST
WWP1
SOCS5
UTP18
MBTD1
UBE3A
ATP2A2
MCL1
EXT1
ACVR1B
RPL7A
MED22
ANAPC7
RAPGEF5
ZNF775
FEM1C
PRELID3B
ABI1
RCN2
PAG1
PRDM2
ZBTB10
PCNX2
ARSB
SCN8A
P4HB
DOCK5
MCAT
AKIRIN1
OCIAD2
FBXO33
C11orf97
PM20D2
FANCA
TSPAN3
NF1
UBE2G2
TMEM160
C2CD2L
EGFR
COBL
KRT19
ANGEL1
TAF5
ANTXR2
ANKRD18B
PEX7
RP9
RB1
RNF169
MFSD12
DOCK1
CTNNAL1
ACTL8
TBPL1
SLC25A28
KIAA1586
SPG11
PARP6
HMGCR
TERF2
RC3H2
RAB5B
VIPAS39
AHSA1
PELI1
RC3H1
NSF
ANAPC11
ALYREF
TMEM175
GAK
HSP90AA1
SLC38A10
CTAGE6
EPS8
CYREN
TIMM23
COX18
TRAPPC3
RPS27A
CLHC1
GMCL1
UBN2
MARCHF6
SUFU
TBC1D30
ELOVL5
GNS
MAP7D1
PDPK1
PSME1
LSM11
ZFYVE27
LPGAT1
FARP2
FADD
APPBP2
HNRNPM
DYRK1A
CDC25A
USP43
PALM2AKAP2
RPS20
PRPSAP1
BMT2
MRPL38
ANKRD46
VPS13C
NUDT4
NUDT4B
FDX1
NAMPT
RRAS2
URB1
NFATC2IP
HNRNPAB
ALDH4A1
FRMD5
UBN1
GLYR1
MAPK9
CDR2L
CRKL
RAB6A
UBE2Z
URGCP
HEBP2
XPA
BZW1
E2F6
MAP3K3
PGAM5
NEDD1
LRPPRC
DENND1A
TOB1
YWHAH
SMARCB1
ILKAP
URGCP-MRPS24
PDIA5
ITPRIP
GPN2
ARFGEF1
SART1
CPT2
GOLGA7
ARL5A
P2RX4
PPP1CB
SSRP1
TMEM131
NT5C3A
OST4
ZNF607
UBE2S
DENND2B
CNKSR3
NHLRC2
DCLRE1A
SIRT7
PARK7
APEH
VPS26C
ABHD10
GATM
SPATA5L1
MIS18A
MAP1LC3B
XPNPEP1
GPRIN1
PLCG2
GPC1
CD81
ATP1A1
STAT3
AGK
CLTC
PNPO
RNF145
FAM86B1
LRRC58
GPX1
TM9SF3
YWHAZ
ITM2B
PLPP6
SPATA6L
EPB41
SMAD1
MATN2
TYRO3
KRTAP4-12
LRRC37A3
EEF1AKMT2
ACSF3
NUDCD1
MAPKAPK5
SYT1
HSPH1
MGRN1
CENPC
DNPH1
ANK2
HEXB
SMAD3
CRELD1
STIP1
STK3
CYTH1
CXCL1
DOCK9
SINHCAF
FZD6
AGTPBP1
MKI67
RALYL
MORC4
POLE4
CTNNB1
LRRC59
DYNLRB2
RTN4
OSBPL8
EFCAB14
HASPIN
DNAJC1
DCAF12
MICOS10-NBL1
MICOS10
FCHO2
USP6NL
RNF168
SYBU
NT5C2
CLYBL
NSD2
CLSTN1
SEMA4D
TMCO4
KLHL20
SOD2
WTAP
PHB2
SCARB1
MARK2
CISD3
GTSE1
PSTPIP2
MTMR12
ANKRD28
C10orf95
ZCCHC14
RPL7
RDH10
VRK1
NOP9
DHRS1
COPRS
KIRREL1
STX1A
TGFBR2
STAMBPL1
SRPRB
HNRNPU
FAM53B
FBXL13
ARMC10
FUCA2
ZC3H4
MIF
PGM2
PDCD5
CXCL2
EIF3B
EXT2
OTUB1
MTAP
ERO1A
CCNJ
SDHA
CCDC127
ZNF577
SNX16
MTR
TRAM1
UBQLN1
RNASEH1
STPG1
NIPAL3
SRSF2
MFSD11
C9orf85
ABHD17B
PTBP3
HIPK3
TSPAN14
RRS1
ARPC1A
GALNT12
STX17
DGKH
NELFCD
MIEF1
RHOC
FAHD2A
AP3D1
PTPRF
HMGB1
NFAT5
PTPN4
DOCK7
PLEKHG1
COX6C
C22orf39
SLC26A6
COP1
TPMT
KDM1B
NDUFV3
PPP6R2
PINK1
KLHL5
CCDC88A
RPL22
ADPGK
UNKL
CNN3
SOCS3
HSPA4
CTPS1
DBNDD1
PTP4A2
DNAJB14
CNNM2
MSH6
TPD52
SLK
TICRR
GAS8
ERRFI1
FAM110C
FOXJ3
KDM3B
HDAC1
CDK11B
CDK11A
MRPL36
DEF8
MARCHF8
PROSER1
NHLRC3
HACD2
PISD
TBC1D5
TTBK2
EYA1
C2orf69
ZC3H7A
SBK1
ARHGEF35
RPL14
PANK1
FAM91A1
DUT
ENTPD7
MTFMT
SCD5
DUSP6
SCAND1
NLE1
B9D1
FBXW8
NT5DC1
C1QBP
EMC8
COX4I1
OTULIN
EIF4H
CSNK2A1
EXOSC10
MRPL52
PSMG4
SCRN3
CIR1
FAM104A
C17orf80
RBM12
CPNE1
B4GALT4
CDCA7
ODF2
MLYCD
UVRAG
COA8
BAG5
CCDC178
STMND1
POPDC3
DSTYK
ABLIM1
PRRC2B
PDCD2
YES1
EIF2S2
NUS1
UBFD1
EARS2
C6orf226
RAD23B
OSBP
FBXO42
PRPF19
MAGEF1
POLR2D
PI4K2B
BPHL
RAB2A
TSNAXIP1
RANBP10
PIGN
TANC2
H2AX
TEAD1
SLCO4A1
FEZ2
SPG7
CAPN2
TADA2B
CCDC96
STX3
DPYS
ELK3
SH3GL2
LGALS3
CD9
WASHC2C
DTD2
IWS1
PSMD1
SPOPL
MPP5
TOMM34
POMT2
GSTZ1
PPP1R9B
NCOA2
UAP1
GATAD1
ROCK2
RHNO1
FOXM1
RCL1
SLC12A5
PDZD8
MEF2D
PLBD2
DHRS11
SERINC2
SLC25A31
HSPE1-MOB4
HSPE1
HSPD1
PLEKHM1
RANGAP1
USP1
RNF139
AEBP2
SCN11A
PKIG
WDR48
CPOX
TBXAS1
HIPK2
DLG4
TRIB1
GFPT1
STIMATE-MUSTN1
STIMATE
RAI1
UBAC1
ACADVL
ERI3
ARHGAP17
SRP72
UBALD1
ARNTL2
SLC25A25
NAIF1
IFT43
SOHLH2
CHD5
CELF1
TMEM183A
TMEM106B
DERA
STRN
FAM122A
GPT2
ATG2B
NAF1
WIPI2
GSKIP
NANP
DLG1
DCTN1
KLHL9
CUX1
BIN3
RBM26
ARHGEF3
COG6
SMC4
FAAP100
JPT1
RHPN1
DAP
KDF1
SMIM43
KCTD9
CDCA2
NBEA
CHIC2
NEK7
RBM17
STRIP1
HECTD3
RTRAF
MBNL1
MIF4GD
DDT
IDE
UBE2D1
PEX2
TAF9
RAD17
AK6
PLEKHO2
CCNY
MNT
EIF5
ARF1
IGF2R
CERS6
FKBP4
FAM204A
LDLRAP1
PATJ
CYRIB
RNF19A
DFFB
CEP104
THAP12
GVQW3
SLC35F2
TBC1D14
CCT2
PPM1D
PPP4C
FAM135A
ITGA3
SDCBP
SYNJ1
GKAP1
EZR
FAM177A1
MXD1
STX7
SRPK1
ACTR5
ZNF704
PTS
PEA15
SETD7
SH3D21
SH3PXD2B
TOMM22
RNF220
DDHD2
TNPO1
ZBTB4
PPP2CA
TKFC
DDB1
ATRN
NOCT
MRPL12
TBCCD1
SREBF1
GXYLT1
YTHDF3
EHBP1
HMGN2
MAP4K3
HLF
SEPTIN11
CSTB
TJP2
TNFSF9
DBNL
RPL8
IRAK2
FAM207A
PPRC1
PPA2
EIF5B
SCAF8
GHITM
VCPIP1
C8orf44-SGK3
KCTD6
CCDC126
LINS1
ASB7
WDR4
DDX21
MSANTD3
KIAA1958
C9orf147
NCOA1
MYL5
ATP5ME
KLC2
SNRNP48
ZBTB38
CHAMP1
TMEM251
MOAP1
AFAP1
ZNF134
LOC389199
SLC49A4
ZNF800
TMEM231
BLOC1S2
RNMT
FAM210A
PDIA6
EEPD1
LAMTOR1
POLR1D
LNX2
PRDX6
CDC42EP4
NAPB
SLX4
CDKN1B
OSMR
KRTAP2-3
TRUB2
COQ4
FAIM
KLHL22
RPL10A
KIAA1841
ICE2
GALNT10
SPATA7
UBLCP1