ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX065546 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◣ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
BSDC1
ITGB3BP
EFCAB7
CCDC200
WDR74
YPEL3
CBX1
RABGAP1
ZFP30
DISP1
STC1
GBA
ZNF829
ZNF568
RABGAP1L
PDE11A
MAPRE2
DNAJC25-GNG10
DNAJC25
ZNF623
MTF2
SAMD4B
SF3A3
MTRNR2L8
DUSP6
RBBP5
YWHAQ
COMMD2
RNF187
COX16
UTP3
CLTB
NUF2
TMEM132A
ZNF292
ZSCAN22
TBC1D19
ATP5MC2
RPS7
TRMT5
SLC38A6
ZNF566
SOD2
WTAP
GTF2H4
TOMM20
TMEM41A
SSBP1
RWDD1
CCDC174
TSFM
ATP1A1
TARS2
HTR5A
RNF125
SELENOH
NEMF
MAN2A1
EPHA3
SLC24A1
RERE
CAT
TTI2
CEP85L
ZNF570
ZNF569
ZNF117
ATF7IP2
MED23
TRIP4
CWC25
PNMA2
SLC45A4
DMAP1
MRPL1
ZNF790
FBXW7
PEX3
ADAT2
NDUFB3
FAM126B
GLIPR1L2
GTF2H2C_2
GTF2H2C
MNAT1
TTLL1
TRIM41
BRAP
ACAD10
LRCOL1
NDUFS7
NR1H3
ACP2
CFAP298-TCP10L
CFAP298
ARHGAP39
MTR
PDCD6IP
SNRPE
FAM13A
CDC5L
PDE1A
MMACHC
CCDC130
MAIP1
JMJD1C
TDP2
ACOT13
RAB18
SMG7
RAB30
PAFAH2
ZNF226
BANP
TMEM242
TTC32
HDAC2
FGFBP3
TTC26
PPIH
RBBP9
SIKE1
PAXBP1
FRA10AC1
DNAJB12
PPRC1
APRT
SKP2
LMBRD2
MRPL48
NME1
TARS3
FAIM
ZMPSTE24
RAB5IF
PDGFD
THAP10
LRRC49
RUNDC3B
TMEM38A
SMIM7
METTL25
CCDC59
STAT3
KDM3A
MRPS18C
HELQ
EIF2D
NEU1
RTTN
SAR1B
CHCHD6
PNPO
LURAP1
REEP3
TACO1
HAX1
IARS1
SLC33A1
BMS1
CCDC107
TFPT
PRPF31
GABPB2
RCAN1
SLC35E3
ZNF391
PARP2
MRPS14
SMIM13
RANBP2
SLITRK5
ZNF540
ZNF571
MRPS23
ZNF350
HEXA
POLR3B
GALK2
COPS2
PARK7
TRMO
NUP155
ATP6V0E2
ZNF687
RPL27
POLDIP3
REXO4
TMEM43
CHCHD4
RBM45
RPS3A
STOML2
CALCRL
PUS10
PEX13
ZNF165
LRRC29
BAIAP2
GOSR1
RPA2
ZNF354A
SYT1
KANSL3
ZNF300
MYO1H
WDR11
CDK19
AMD1
METAP1D
DSTYK
NECAP2
PIH1D2
NKAPD1
RIF1
TTLL12
FAM199X
SLC3A2
SYNPO2
TMEM259
ZNF527
CCNL1
NRL
DCAF11
DCP1A
MOB4
NCOA7
ABHD10
ZBTB8OS
RBBP4
PKIB
SERINC1
AURKAIP1
TEFM
CUL5
SULT1C2
MTRNR2L2
NUP54
EPRS1
INTS2
RPS13
CLPTM1
SLC35B4
POLG
CDC73
TIGD1
EIF4E2
RPS29
CCNC
RPL5
ISY1-RAB43
ISY1
FAM174A
DCLRE1B
AP4B1
BORCS7
VPS45
PPIP5K2
GTPBP3
COX7A2
NUP107
ANO8
STX16
MRPL30
MITD1
SLC35A3
SNRPD1
PIGC
ECHDC1
LUC7L2
FMC1-LUC7L2
FMC1
ZNF791
ZNF490
PCDH15
MRPL40
HIRA
NOP16
HIGD2A
SLC25A16
KRR1
DYNLRB2
TOGARAM1
KLHL28
FDPS
MRS2
SLTM
LRP6
NBPF1
DCT
EFHD1
SF3B5
COPS4
MRPS33
N6AMT1
TAF12
TRIM46
KRTCAP2
RPL37
DRG2
RPS14
MIER1
DNAI4
EXO1
PPIG
GSTA4
NOL12
NOS3
STXBP3
POLR1F
ZNF793
STX18
EIF3F
CCDC97
ATG5
UBOX5
FASTKD5
OAZ3
LAMTOR5
OSGEP
APEX1
WDR36
METTL9
ZSCAN30
RPS12
ZNF383
ZNF56
P2RX6
LRRC59
CDKL2
CDK5RAP1
PRDM1
CSNK1E
TGFBR2
SLC30A5
FOXO3B
TSTD3
TBL1X
NMRAL1
HMOX2
ERMARD
HIGD2B
BBS4
SRP54
ACTRT2
ATF7IP
DCP1B
POLR3G
MBLAC2
CHEK1
SUPT3H
SNX14
ZNF561
ALG10
ALG14
UBR2
DAXX
GPN2
TPR
ODR4
ZSCAN31
ALDH9A1
MTMR9
CLN5
DPYSL3
CCDC120
CPPED1
GABPA
ATP5PF
DHX16
ZNF846
TRDMT1
DDX41
PPOX
HBS1L
NUP205
C3orf14
GRPEL2
BRF2
ATG4C
TMEM106B
CCDC124
SLC2A4
H2BU1
H2AW
INPP4B
TPK1
PHIP
SRP9
GPR137
FOXP1
DNAJC19
WBP11
C12orf60
C8orf37
ZNF335
RIMBP3C
RIMBP3B
MRPL24
CRNKL1
CFAP61
SLC17A5
CHD1
FAAH
SNIP1
DHTKD1
GTF2B
PLS1
RSL24D1
TRMT11
GOLPH3L
PNISR
ASCC1
ANAPC16
NMT2
SUPT7L
SLC4A1AP
PDE4DIP
ZSCAN25
TMEM101
GORASP2
INO80B
MTIF2
LOC102724265
SEC23B
HEATR1
DNAJC24
DCDC1
PES1
IRF9
TMBIM4
ANKRD36B
TAF13
DUSP12
CEP85
HMGB1
USPL1
TNPO3
EIF3D
BAG6
APOM
ABCB10
PLCH1
SLC25A21
RUFY4
VTA1
NMBR
ARL14EP
TMEM116
ERP29
COMMD6
UCHL3
INSYN2B
ZNF285
CALD1
ZNF408
ARHGAP1
IPO4
RAD54L2
WDR55
COG2
ABCA3
UBE3B
KCTD10
DEDD
MICU2
KLHL32
CYCS
JOSD1
ATG101
MFSD8
ABHD18
UBE2L3
HECTD1
ZNF501
VPS25
TXN2
RNF144B
CFAP20
MRPL45
OSGEPL1
ZCWPW2
AZI2
FBXO28
HIPK1
ZNF589
PARPBP
NUP37
IPO7
EXOSC10
TMEM222
OPA1
RNF6
FBXO22
SLC25A53
PSMD11
PACSIN2
MYO18A
CFAP410
PGM1
MED11
AQP4
IST1
PSMD6
GPAM
DDX46
NUDT15
CYB5R4
MRPL53
WDHD1
SOCS4
FBXL19
SMPDL3A
POLR2J3
BTD
SUGCT
MPLKIP
ACBD6
GTPBP10
UFL1
TM2D1
HACL1
MAST2
TNFRSF19
RIOK1
CAGE1
C15orf61
NLGN1
INO80C
DDX18
FAM228B
SF3B6
ALKBH3
MED18
RPS26
CSDE1
TAF3
DCAF8
ABCB8
MZT1
BORA
IRAK1BP1
ATL1
CORO2B
INTS5
CCNI
C2CD5
PPP1R11
SIRT4
ZDHHC6
VTI1A
RFXANK
BORCS8-MEF2B
BORCS8
RPTOR
VPS52
RPS18
ESCO1
HMGCR
GPR89B
LCA5
HMGCLL1
RAB37
ACOX3
TRMT44
TOR1AIP1
MRPS31
ALG10B
WARS2
ZNF518A
EIF2S1
ATP6V1D
TMEM59
TCEANC2
VPS26C
BOD1L1
CREBL2
NDUFA12
GPATCH3
LRRC10B
PLD4
SULF1
SNX17
EIF2B4
PAAF1
COA4
ZNF582
WDR62
THAP8
ZNF2
RIMBP3
SNAP47
JMJD4
FAM234A
CIZ1
AASDH
THG1L
MTRES1
PDSS2
COL4A6
COL4A5
IPP
DRG1
PABPN1
ZNF3
SAYSD1
MMUT
CENPQ
C11orf65
PPP1R9A
SPATA7
C6orf118
ZNF345
GFM2
TMBIM6
TMA16
HMGN4
BCKDHB
H4C14
KBTBD3
AASDHPPT
PEAK1
HMG20A
ASCC3
GPATCH4
SULT1C4
DPY19L4
MRPL21
IGHMBP2
SMU1
R3HCC1
RALBP1
ZNF529
ZKSCAN2
ZNF461
SPAG9
ARHGAP19
TYW3
CRYZ
NUDT5
CDC123
ZKSCAN8
PCDH9
SUMF1
DYNC2LI1
CBWD5
CBWD3
LTA4H
PPIL3
NIF3L1
IPO13
ZNF331
ZNF839
CCNT1
FDXACB1
C11orf1
TMEM33
TRUB2
COQ4
VPS13B
CYB561A3
TMEM138
FITM2
C15orf40
FBXL17
ST6GALNAC2
GOT2
NEK2
PPWD1
CENPK
EIF2S3
CNIH3
FAM133B
EIF3E
AARS2
FANCI
PCNA
CCR7
RBM34
IFTAP
BBS5
TIPARP
MRPL3
PIKFYVE
DNAJC16
MDM4
MRPS16
MSL2
NOLC1
FBXO38
ZNF33B
DPH6
BTF3L4
TXNDC12
LMO7
PUM1
H4C8
PPP4R3B
ETFDH
C4orf46
COX18
MRPL54
APBA3
FKBP7
THRAP3
C2orf42
EDEM3
GAR1
TSG101
NDUFS3
KBTBD4
NDUFC2-KCTD14
NDUFC2
PSMA1
SNX5
MGME1
GCLM
UFC1
CUL2
VPS33A
RNF207
RCAN2
MDP1
GNE
IMPACT
CTH
MAP2K7
GFER
DUS3L
CNOT2
PPM1J
SHC3
ZBTB45
SMG5
DHRS13
TMEM69
SRSF7
LOC100421372
HSPA14
CDNF
NDUFB2
RNF182
MRPL42
NAT10
TTC37
ARSK
ROBO3
DUS2
DDX28
SYMPK
DNAI3
ZNF362
HSPE1-MOB4
HSPE1
HSPD1
DPP9
PSMD3
OGT
TRIM59
CMSS1
ATP5MF-PTCD1
ATP5MF
FAM71E1
EMC10
NSUN4
CNTRL
HLCS
KIF15
KIAA1143
BCL2L13
C5
ZNF23
RCCD1
ZNF184
LYRM2
PLAC8
HNRNPR
TXLNG
TFIP11
DCUN1D5
PHTF1
C18orf21
GCFC2
CCDC77
C1orf53
METTL1
EEF1AKMT3
CATSPERE
ARHGEF4
KDM1A
SLC39A6
ELP2
UQCC1
RBM7
C11orf71
WDR61
ZNF772
COX14
TERF2IP
KARS1
EXO5
LTN1
PPA2
SRSF11
LRRC40
SMAP2
NUP133
SETDB1
APC
AKR1B1
ZBTB8B
COPS7B
PTPN4
DYNC1I2
SRRM1
DIS3
KPNA6
PLPBP
GLIS2
POLR1B
PANK1
SORBS2
RHOBTB1
MTERF4
TTC4
FNTB
TTC14
CZIB
CMC1
H4C15
TTC23L
VWDE
STEAP1
PYCR2
GARS1
TIGD6
HMGXB3
ANKRD13C
CDK7
NELFA
PGD
DNAH7
TNFRSF10D
ACY1
YTHDC2
SCNM1
LYSMD1
PRPF18
AP3B1
LRIG2
RPL24
ABCF2-H2BE1
ABCF2
NDFIP2
POT1
PLCXD2
ZNF432
GTF2H2
SDCCAG8
CEP170
TRMT61B
SEC31A
AAAS
SPATA5
NUDT6
KIFC1
THAP9
DNAJC21
ZFP14
EIF4G2
RLF
GRAMD1C
RBBP6
FANCD2
DDX21
NUP35
TPRA1
HSCB
CHEK2
ANO5
CALR3
C19orf44
SH3BP2
PHKG2
DGKB
NMNAT1
LZIC
DNAJC11
MEX3C
GDAP1
AGBL3
TIAL1
MFSD4B
RAB3GAP2
MSANTD3
NDUFAF6
ATP10D
CEP350
ABCD2
IL1RAP
CRTAP
IFNAR1
RPLP2
METTL16
TSGA10
N4BP2L2
FAF1
TMCO1
PSMC4
NEK7
PIGO
MRPL27
EME1
C6orf226
GTF3C6
NFU1
ZNF471
BCAR3
TATDN3
NSL1
MRPL19
RSAD1
ZNF302
CLCN3
LSM6
FASTKD1
DSCC1
OTUD4
ILF2
SACM1L
STAT6
CFAP69
USP4
ECI1
SPEF2
TOMM40
GCA
ACAT1
TXLNA
SDHAF1
SMG8
ZNHIT6
GEMIN5
DYRK4
NGDN
RPS6
ATL3
SNRNP70
KLHL2
CLGN
TMEM19
ST8SIA1
PAFAH1B2
CCDC146
SPC24
GJB7
INTS12
GSTCD
SREK1IP1
CWC27
WDPCP
MDH1
IPPK
ARIH1
AARSD1
BCAS2
SLC25A19
DNAJC9
MRPS30
COQ10A
ACP6
CLVS2
MAGOH
C10orf88
NDUFA4
MGST3
UTP25
EEF1AKNMT
MICAL3
TOE1
MUTYH
MAGOHB
PROS1
ETNK1
RAMAC
C2orf73
RPL21
ZSWIM2
PPP6R1
CENPN
ZNF260
COASY
ASB6
RRP9
PARP3
EIF3M
ATP5F1B
PMVK
ZNF497