ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9823127 | GM12878
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◣ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

RANGAP1
PHF13
STARD10
TIMM22
ZNF286A
IFRD2
IPO13
TNFAIP1
IFT20
PSMC4
MICOS13
HSD11B1L
TBC1D23
AP2S1
MRPL24
GSPT1
ZNF331
ERCC4
SF3B2
SEC11C
ACIN1
C14orf119
RPS27A
CLHC1
RTEL1
PAFAH2
CXXC1
ZNF414
TMEM245
NOLC1
MMACHC
SERTAD3
STIL
ANO10
PSMD2
ZNF256
CLPB
PHF12
GTF2H4
EIF1B
TERF2
ZNF565
ZNF146
FAM193A
MEA1
DUS3L
SYMPK
FOXA3
MPI
OSCAR
NDUFA3
CARM1
ZNF268
ZSWIM9
LIG1
FBXO48
APLF
APEH
SLC4A2
CDK5
REXO1
ZSCAN22
ZNF56
ST3GAL2
PRCC
ATP6V1F
LRRC29
CEP128
GORASP2
NT5C3A
PIK3R2
FZR1
DAXX
CNPY2
SRRM2
SAMHD1
NEURL4
CRTC2
CFAP20
ZCCHC8
CHMP5
BAG1
TMEM143
SYNGR4
N4BP2L2
ZW10
ZNF180
PA2G4
KPTN
ZNF133
BTRC
TBC1D31
ABLIM2
TSPAN17
DNAJB12
EPRS1
SERF2
GATB
PEMT
FTSJ1
RETSAT
ELMOD3
STXBP3
ACP6
GSK3A
SPNS1
EIF1AD
BANF1
MPHOSPH10
MCEE
RPGRIP1L
FTO
C12orf43
NSFL1C
PGM2L1
PI4KB
POLR2E
ZNF408
ARHGAP1
FOXP4
PKD1
SCNM1
LYSMD1
ETFDH
C4orf46
PANK3
CASP2
ZNF227
PRRG2
NOSIP
DNAJC16
CNIH1
HEXIM2
CNIH4
PFKFB4
UBR2
AHCY
ZNF557
INO80B
SDCCAG8
CEP170
RBBP5
CDC6
MFN2
C1orf74
ZNF7
SMPD3
BARD1
ABCF3
E2F4
TMEM201
SPHK2
RPL18
HAUS6
FAM72C
DCTN1
FAM72D
ZNF547
TRAPPC2B
ADCK1
DNAJC28
SMIM12
THOC3
TBL3
STK25
ZFP90
C1orf159
NOP16
HIGD2A
ATL3
USP35
KCTD21
CACTIN
RNASEH1
TXLNG
DOP1B
PLTP
MAP2K7
LINS1
ASB7
ZNF546
PELI1
ESCO2
RPL13A
RBIS
SNAPC3
TMEM199
POLDIP2
FAM98A
ZMAT5
UQCR10
WDPCP
MDH1
ENDOG
UTP6
ZDHHC16
EXOSC1
SNAPIN
THOC6
HCFC1R1
PRKCSH
CCDC151
TMEM59
TCEANC2
DGAT1
RIC8A
BET1L
PNKD
AAMP
RPL37
U2SURP
DMAC2
EIF4B
MZF1
FBXO9
SSBP1
BNIP1
TSSC4
CNOT1
SYNCRIP
METTL25
CCDC59
TPR
ODR4
CCAR2
CCDC150
GAPVD1
FAM220A
SEC14L1
TMED4
DNAJA3
RPP40
ITGB3BP
EFCAB7
PARP2
BANP
FNTB
FAM168A
TMEM115
ATR
PPP4R3B
ICE1
BUB1B
ZNF446
INVS
ERP44
TOP1
RPL26
ZNF25
RAB5A
EFHB
KIFAP3
LYSMD3
TOR1AIP1
TFB2M
CNST
YTHDF1
ZNF444
LARS1
ZNF134
KANK2
SETMAR
RPL27
CYB561D1
HIF1AN
MRPL11
RAB1B
SLC35B1
CYP20A1
INTS9
HMBOX1
ZNF14
POLR3F
DZANK1
NACA
KBTBD6
MBD1
AFG3L2
AURKAIP1
RMND1
ARMT1
SDE2
MRPL15
CC2D1B
TRIP4
SLC24A1
SNX17
EIF2B4
MAPK1
TSNAX
RPP14
HTD2
TMEM18
SNRNP70
SKP2
LMBRD2
SLC33A1
COG2
ZNF383
ATP6V0D1
ZNF576
IRGQ
CTU1
NAA35
RTTN
MEMO1
CEP350
CTDP1
DIXDC1
C8orf76
CLPX
ZMPSTE24
TSGA10
RAB18
C2orf15
DHX8
UBFD1
PAK2
EARS2
SIVA1
CEP162
RNGTT
IQCB1
EAF2
FDXR
POLR3H
EIF2D
LRRC37A3
FEM1B
VKORC1
SEC61A2
CLPP
ACTR1A
SPG21
CCL5
TMEM68
TGS1
RAB5C
COPS7A
RPL18A
PHB
MCCC2
LONP1
CATSPERD
PLD3
C19orf47
ZNF497
TIMM17A
KMT5A
GTF2B
TPGS1
MZT1
BORA
WWOX
ARHGAP9
MARS1
ZNF416
ZNF764
LIMK2
WDR54
C2orf81
ZNF816-ZNF321P
ZNF816
PLK3
AMBRA1
SPAG4
RIC8B
STK11IP
RCE1
EIF1
SARS2
MRPS12
SAC3D1
SCAND1
TRUB2
COQ4
FAM228B
SF3B6
NMNAT1
LZIC
NOL11
MTRES1
AKR1A1
NDUFV1
EYA3
DHX9
TIGD2
PARD6B
CNOT4
STRN
SOCS5
COX14
PRPSAP1
ATP5MPL
KLHDC10
FEM1A
ZNF773
SLC25A11
RNF167
RPS3A
PPRC1
DCAKD
PIGO
TESK1
NMT1
CRELD2
ALG12
DCP1A
DRG2
KIFC1
OSGEP
APEX1
BMS1
PTPN4
SERBP1
PGRMC2
GET4
TSNAXIP1
RANBP10
MIGA2
SAYSD1
DTWD2
LOC100289561
NUDCD1
ASNSD1
ASDURF
SH2D3A
TVP23B
MRPL42
DET1
MRPL34
SLC25A23
HMGB1
USPL1
ZNF585A
AGA
FBXL19
SLC10A7
TARBP2
SLC5A6
ATRAID
AP2M1
KRBA1
PUM1
CBWD5
CBWD3
CBWD6
IBA57
BORCS5
MYBL1
NHEJ1
SUCO
ZNF586
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MFSD8
ABHD18
PABPC1
PSMC5
FTSJ3
DHX35
POLD1
LHPP
NME1
ELAC2
EXD1
CHP1
EIF3C
EIF3CL
RABL2A
ZNF189
MRPL50
RPL23A
RAB8A
ATP8B3
RALGAPA2
CPPED1
RPL22
MARK2
ASB6
CRK
TMEM52
NOC2L
DCLRE1B
AP4B1
C1QTNF6
CALR3
C19orf44
TMEM141
TBC1D13
PSMD11
VPS26C
WDFY2
HBS1L
FARP2
PAIP2
AP1M1
FAM185A
PHF23
TMEM205
CCDC159
SMIM13
RPA2
RANBP3
ZNF324B
BTD
HACL1
SLC7A6OS
PRMT7
PCM1
TXNL4B
DHX38
ADCK5
EEF1G
TMED10
TMEM242
ZNF260
MYBBP1A
CSNK1A1
STAG3
GPC2
GBA
ZNF527
DFFB
CEP104
RAD50
ABI1
FBXL12
TMED1
XAB2
CDKL3
SLC35B4
CDK5RAP3
ASCC2
UBE2B
TSACC
CCT3
UQCC2
RPS11
FBXO46
ELMOD2
ZNF573
NPAS1
SENP2
ZFP1
CARNMT1
PDHX
APIP
PLEKHM3
ZNF461
RPTOR
SUGP1
MAU2
ZSCAN32
ZNF174
TTC9C
HNRNPUL2
CIAO2A
ACAA1
MAMSTR
MRPS31
SMG5
SART1
PEX16
MRPL38
DIMT1
GPANK1
CSNK2B
NIFK
LUC7L2
FMC1-LUC7L2
FMC1
PDCD2
DNM1L
RDH11
MIB1
MIA3
CBR4
RRP9
PARP3
TIGD4
ARFIP1
PFDN4
SMPD1
SLC39A13
PSMD3
DYNC1LI1
ZNF350
CDK11B
CDK11A
SKIV2L
NELFE
SLC16A13
FAM177A1
TELO2
CEP131
CCNI
CCT2
TBC1D30
GNS
SF3B5
LMBRD1
CIPC
TRAPPC3
RPS7
GTF2H5
RNF149
FAM71E1
EMC10
CCNB1
KDM8
RWDD1
SHISA5
VHL
LMF1
ELP3
YIF1B
ZNFX1
MARCHF8
KCNJ15
CCDC200
WDR74
YPEL3
BSDC1
SNX16
MTRNR2L2
MTRNR2L8
DUSP6
ZNF562
PDE11A
RABGAP1
CBX1
FEM1C
NUF2
PAXBP1
MTF2
STX16
DMAP1
SAMD4B
SF3A3
ARHGAP39
MED23
FAAH
NDUFS7
BAAT
COX16
TTLL12
CCDC130
CEP85
PEX3
ADAT2
RPS29
TMEM41A
RAB37
ZNF117
CEP72
YWHAQ
ACYP2
ZNF623
INTS12
GSTCD
KMT2A
FRA10AC1
PPIG
DCAF10
JMJD1C
MRPL44
MAPRE2
GDPGP1
CIB1
POLE4
NDUFB3
FAM126B
DSTYK
NPAS4
RABGAP1L
NOS3
FAM227B
DTWD1
ACOX3
TBC1D19
ZNF426
ZFP30
GTF2H2
STX18
SELENOH
TMEM70
TOP3B
TRMT44
POLR2J3
TTC32
DPY19L4
PRELID3B
ATP1A1
COMMD2
DNAJC25-GNG10
DNAJC25
TARS2
ZNF561
POLR3B
PPIP5K2
SMARCD2
CLK4
GSTA4
ALG10B
TFPT
PRPF31
YTHDC2
RERE
UTP3
SLC25A51
SLC44A1
RBBP9
CAT
GTF3C3
FRG1
IPO4
RPS14
SFT2D3
REEP3
ANKRD54
RAD54L2
EIF3F
INTS5
VTA1
NMBR
EPS8
ATF7IP2
BCAR3
SMG8
LSG1
GTF2H2C_2
GTF2H2C
SUPT7L
SLC4A1AP
MRPL40
HIRA
GOLM2
HTR5A
STAT3
ITGA4
CAMK1D
REXO4
SNIP1
INO80C
TEFM
C3orf14
PPP6R1
CDK5RAP1
TACO1
RNF187
ZNF829
ZNF568
DRAP1
C11orf68
TDP2
ACOT13
RILP
SNAP47
NEMF
PSMF1
USP30
KDM3A
COPS7B
ORC4
MBD5
NBN
FAM207A
TMEM43
CHCHD4
MTERF4
MRPL21
IGHMBP2
JMJD4
ZNF391
WDR11
TATDN3
NSL1
TMEM222
ILF2
MTRNR2L9
FGFBP3
ATP5MC2
KANSL3
SLC29A2
WDR36
ZNF540
DUS1L
TTC26
SAR1B
MOB4
MRPS18C
HELQ
FAM133B
MRPL1
ZNF571
ZBTB45
CCDC97
HSPE1-MOB4
HSPE1
HSPD1
WDR43
AKAP10
DPP9
KLHL20
GALK2
ZNF226
C17orf75
IST1
MTIF2
ZBTB40
POLR3E
PDE4DIP
GTPBP3
CD47
MMP7
KIAA1549
GFM2
TUT1
GABPB2
WDR55
COPS4
DDX18
CTNNB1
MRPS23
KDM1A
CHD1L
SEC13
ZCCHC4
SNRPB
MRPL48
MAIP1
RUVBL1
GRPEL2
NDUFS3
KBTBD4
NR1H3
ACP2
OTUD7A
ATF7IP
TTI2
RPS20
NUP54
RAB30
ZSCAN25
STAU1
ZNF609
MAN2C1
POLG
CFAP298-TCP10L
CFAP298
TPM1
C8orf37
CCNC
NCOA7
TMEM101
TTC4
GTF3C5
MNAT1
PRPF18
B4GALT7
NOTCH2
ADRM1
SLTM
KLHDC9
MRPL30
MITD1
ADPRS
METTL9
HNRNPD
EIF3E
TPK1
COX7A2
GMPS
PSRC1
THAP11
PSMD6
MTBP
MRPL13
SUGCT
MPLKIP
SDHAF3
BRF2
TSFM
SLC35A3
HUS1
LOC102724265
CASC3
ALKBH3
ING2
COPS2
MED18
PHIP
TIPARP
DEFB124
PIGW
MYO19
NAA20
OPA1
CENPV
BRWD1
SMU1
NCBP3
SNRPD1
AGK
CDC73
TGFBR2
ZSCAN31
MRPL3
BCL9
CYP17A1
SNRPB2
MTR
SRRM3
EXO5
TRMT2A
RANBP1
CLTB
NECAP2
TTLL1
VIRMA
MLEC
CRKL
SACM1L
FAM98B
CLUAP1
C18orf21
TRMT5
SLC38A6
AARS2
ZNF280D
RBM45
SESN1
RPL26L1
TTC13
PRKAB2
ARV1
CDK19
HAX1
GFI1B
ZNF292
SMG7
ZSCAN30
SNRPE
TIGD1
EIF4E2
ZNF76
PIP4P2
MAGOH
CLTC
R3HCC1
LRP6
COA6
RPS15
RBM28
PIH1D2
NKAPD1
STOML2
MRPS14
VPS13B
ALG10
ANKRD40
ANXA2
C10orf88
CALCRL
CEP120
PDCD6IP
RPL5
STX6
SEC23B
CEP57L1
MRPL16
NFAT5
SUGT1
KMT2D
CEP85L
CCDC88A
DDX1
NOXA1
MRPL39
GABPA
ATP5PF
HLA-E
DGKZ
CASS4
ACTL8
RNF6
PPP2R5B
NDFIP1
FAM234A
PRIM2
MAPK1IP1L
IQSEC3
KRR1
DHX16
ZZZ3
NBPF1
ITGAL
ATG101