ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9823128 | GM12878
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◣ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

STARD10
IPO13
CTU1
PHF13
C1orf159
TBC1D23
POLR2J3
RANGAP1
DESI2
RAB5C
AURKAIP1
GTF2H4
SDCCAG8
CEP170
TNFAIP1
IFT20
INTS9
HMBOX1
LOC100289561
MEA1
EIF1B
DHX34
RPGRIP1L
FTO
HEXIM2
TIMM22
METTL25
CCDC59
PSMC4
IFRD2
JOSD2
PACC1
TIMM13
NOLC1
TMEM245
RTTN
PES1
SCNM1
LYSMD1
CLIC4
NOL11
ENDOG
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TSSC4
RALBP1
MRPL24
ZNF565
ZNF146
PAFAH2
LRRC37A3
CFAP20
MMACHC
NUDCD1
CCDC174
TSN
PANK3
FEM1A
ZNF286A
CDCA3
STXBP3
TXLNG
PHB
EFCAB2
KPTN
L3MBTL1
ZNF56
RBAK-RBAKDN
RBAK
C19orf25
LRRC29
ZNF444
GNAI2
CARM1
ZNF189
MRPL50
SNX27
BTRC
DUS3L
CHMP4B
EEPD1
GORASP2
PSMD3
CIPC
KNTC1
CLPB
CHD8
CDK13
DHX16
RAD23B
FNTB
PNKD
AAMP
AHCTF1
CHFR
SNX3
TMEM115
ANO10
MRPS22
RMND1
ARMT1
CHMP5
BAG1
ZNF559-ZNF177
ZNF559
GOLGA5
SEC11C
RPL5
PRCC
ZNF585A
LANCL2
NAA80
HYAL3
MICOS13
HSD11B1L
TPR
ODR4
C11orf49
ACIN1
AP2S1
STK25
C14orf119
DNM1L
GSK3A
RAD52
PSMD8
SUGCT
MPLKIP
PSMD2
SH3GLB2
CXXC1
SERF2
ZNF235
SAC3D1
NPAS1
INO80B
WDR62
THAP8
RNGTT
BOLA1
CACTIN
TMEM59
TCEANC2
NDUFV1
EPRS1
ZW10
SMUG1
ZSCAN22
SLC4A2
SLC37A4
CDK5
CLP1
MRPL48
SPHK2
RPL18
ZNF268
RETSAT
ELMOD3
UBR2
QTRT2
CCDC191
BAX
BRMS1
FAM133B
ZNF527
COQ8A
ZFYVE1
TTC13
ARV1
THOC3
ZNF566
UBXN7
RPS27A
CLHC1
PRMT2
C16orf91
ZNF599
ATL3
ZFYVE19
DNAJC17
SOX6
C11orf58
AP2M1
SKP2
LMBRD2
TMEM127
CIAO1
MRPL17
CCT8
FAF2
C12orf43
COX16
GFI1B
TSC1
VPS26C
MAD2L1BP
GTPBP2
TAOK3
RAB18
FIS1
TSNAX
DCAKD
C5orf24
ORMDL3
MAP2K7
NMT1
NUF2
INKA2
DDX20
TAF5
SF3B5
MRPL11
PSD
USP32
ZNF420
IPO7
DIXDC1
ZNF473
VRK3
HEMK1
ZNF25
EEF1A1
ZC3H11A
POLK
CERT1
SF3B2
IFT88
EEF2KMT
CDK12
SLC35B4
FBXL19
NFXL1
OCEL1
SURF6
CBR4
ZFP14
RB1CC1
NUP205
PHF12
KMT5A
RILP
GSPT1
SERBP1
GDAP1
PPP1R12B
FBXO46
BANP
PRPSAP1
FBXO34
PCM1
TTC31
CCDC142
SERTAD3
ZNF586
SMIM13
RCOR3
ARRB2
SLC39A11
SYMPK
FOXA3
RELL1
SH2D3A
DYNC2I1
AHCY
SCAF1
WWOX
MRPL38
RPL26
UBQLN4
LAMTOR2
ZNF79
SDR39U1
FZR1
ZCCHC4
RIF1
TMEM18
SUCLG1
ABI1
ZNHIT2
SLC33A1
C10orf88
PEMT
ELMOD2
RPS6KB2
MTCH2
SEMA4F
INTS4
WDFY2
OGA
HNRNPA3
DDX11
ZC3H3
TIMM10
RTEL1
ZNF773
POLR2H
CCDC146
RPS12
PPP4R3B
ZCCHC8
R3HCC1L
KLHL12
ERCC4
CNPY2
SCAI
CHKB
PLD3
C19orf47
P4HA1
ALAD
B3GAT3
PPP1R12C
TRIM28
MRPS31
NOP14
GRK4
ZNF225
TSNAXIP1
RANBP10
INTS10
TMTC3
CEP290
CMTR1
INPP5A
COX14
HARBI1
ATG13
ECSIT
THYN1
ACAD8
SMPD3
NOL6
ENOX2
PHF23
ZNF461
GOSR2
ZNF891
ZNF10
NEURL4
DDX47
ZC3H4
ACP6
TCOF1
GBA
ATP5MPL
PLK3
SIRT4
EFTUD2
CCDC103
SERP1
EIF2A
RNF14
ZHX1-C8orf76
ZHX1
ZBTB37
SRRM2
TMUB2
CEP20
SLC25A20
COPS4
CBWD5
MARK2
TMED4
LARS1
MIGA2
SMU1
PCBP2
ZNF350
TRIM59
CDK5RAP3
ZNF416
DMAC2
MAK16
NACA
SAFB2
SAFB
CHAC2
PFKFB4
ZNF331
PA2G4
POLE3
C9orf43
PDCL3
YWHAG
CEP97
SLC25A11
RNF167
SH2D6
MTIF2
PPP6C
THRAP3
POLR2E
LYRM7
STYX
DOP1B
B9D1
MCCC1
THNSL1
MAPK7
ASNSD1
ASDURF
EEF1G
MEN1
RAB1B
ZNF408
ARHGAP1
EIF3F
TSGA10
C2orf15
CYP20A1
SRCAP
LOC730183
VPS50
HEPACAM2
STRIP1
FAM72C
FAM72D
ATP6V1F
SESN2
SMG1
NDUFS7
CBWD3
CBWD6
MRPS14
PRKCSH
CCDC151
DNAJC16
CEP164
SKIV2L
NELFE
MFN2
SF3B1
VDAC2
ALKBH5
CTNNBL1
SETMAR
UBTD1
MMS19
CAPN10
CEP128
TSEN34
MBOAT7
TMEM222
CCAR2
PARP2
ZNF585B
TIAL1
PSMD1
OSCAR
NDUFA3
TMEM143
SYNGR4
TMEM199
POLDIP2
ZNF576
IRGQ
RPL7
RDH10
NBEAL1
TARS2
DCLRE1B
AP4B1
BRF2
AAAS
ZNF451
RAB1A
KBTBD7
FAM126A
CDK8
SYCE3
CNIH1
RNF43
NHEJ1
RPL18A
ZNF284
ZMAT5
UQCR10
FYCO1
CCDC130
RAD51AP1
C12orf4
CDK11B
CDK11A
UBXN4
TAOK2
UTP6
UTP23
NME1
SH2B1
C7orf25
TUFM
SCAMP3
SLC25A19
MUC1
PSMD12
ZNF772
USP14
BLVRB
SPTBN4
C6orf136
CPPED1
MRPL45
BORCS7
MVB12A
TPRKB
CAAP1
HSPBP1
TIMM17A
MYORG
PPP2R5D
THOC6
HCFC1R1
DNAJB12
GLIPR1L2
TMED1
ZNF337
RRP9
PARP3
COX8A
TMED7-TICAM2
TMED7
SETD3
CCNK
METTL9
SESN1
CEP57L1
ARMH3
CCDC77
EIF3D
TFB2M
CNST
TERF2
BPNT1
STAT2
PIK3R2
DCAF1
ZNF7
WDTC1
RPS11
RPL27
CDC73
CUL2
PKN2
RAB5A
EFHB
ZNF589
FAM220A
UBFD1
EARS2
CLPX
POMT2
GSTZ1
WDR87
SIPA1L3
ESCO2
HSPA13
GPANK1
CSNK2B
NTAQ1
GMPPA
CD82
GSN
SNAPC3
MRPS35
TBCB
POLR2I
RAB14
SIVA1
RPL35
ARPC5L
ZNF787
HTRA2
ZNF419
GFM1
ERI1
UBE4A
CTDP1
DDX23
SDHB
SRPRA
ATG5
RPL29
THEM4
PARD6B
L3MBTL2
LUC7L2
FMC1-LUC7L2
TIPARP
WDPCP
MDH1
APEH
LRIG2
RSRC1
VCPIP1
C8orf44-SGK3
CBX8
ORC4
MBD5
HSPE1-MOB4
HSPE1
HSPD1
RBM28
RWDD1
YIPF2
TIMM29
TAF12
ICE1
ARNT
DIMT1
ABL1
UBE2J2
ECH1
MPI
IRF7
DRG2
ADSS2
TMEM41B
CDK5RAP2
BCAS2
DNAL1
CREB1
RPL23A
SKAP2
THTPA
RALGAPA2
PPRC1
PSMD11
CD55
GAPVD1
SRP54
ZNF573
GATB
ZNF417
NRTN
ZFAND2B
C12orf29
BARD1
HINFP
ZFPM1
HMGB1
USPL1
GTF2H2C_2
GTF2H2C
MAPKBP1
VKORC1
SLC35E2A
PPP4R3A
CC2D1B
ZDHHC12
NIPSNAP1
ZMPSTE24
BNIP1
CCDC150
PSMB7
STRADA
MKNK1
IBA57
MARCHF2
ZNF567
MYBBP1A
AOPEP
AFG3L2
MZF1
SAMD8
EIF3E
CMC1
APC
FAM160A2
MBD1
TTLL12
LSG1
ALG10
COMMD1
USP35
KCTD21
MORC3
HPCAL1
EP300
VTA1
NMBR
SNX17
EIF2B4
ADPRS
RRP15
LZTR1
MGST3
PGRMC2
PLEKHB1
CTSA
SNF8
ZNF468
NEURL2
ATP5PO
PARS2
PREB
ZNF212
ATP6V0D1
ATAD2B
ZNF180
CCDC6
EIF5A
NKIRAS1
RHBDD3
EWSR1
RPL15
TSACC
CCT3
UHRF2
REXO1
TSPAN17
LIN52
ALDH6A1
MIB1
NR1H2
PPOX
TOMM20
TIMM50
PKD1
SPAST
RTL10
GNB1L
YPEL5
TVP23B
PMM1
ZNF845
ZFC3H1
THAP2
MINDY2
ELOC
DCP1B
RABIF
DEDD
ACAP3
TRAPPC4
RPS25
PUSL1
USP19
MFSD8
ABHD18
CCNT1
XPC
LSM3
MTIF3
NOL7
CFAP410
TOGARAM1
KLHL28
TMEM14B
ZNF274
PITPNB
KMT5C
DECR2
POLD1
SPAG1
CCDC24
POLR2J
TOMM40
TRAPPC3
INVS
ERP44
ZNF133
LEPROT
LEPR
PPP1R35
DELE1
RIN1
SMG8
YTHDF2
CSTF2T
RBM25
KIAA0895
TESK1
MGRN1
SPRYD3
TCF19
CCHCR1
TMEM214
DNAJC25-GNG10
DNAJC25
NUDT5
CDC123
SLC17A5
PPA1
PABPC1
SGTA
GRSF1
BDH1
DYNLT1
TOR1AIP2
N4BP2L2
MRPL42
NUDT15
MEIG1
KIF2C
RAB10
MBTPS1
NRDC
GPER1
LRRC42
ST20-MTHFS
GALK2
SLC39A13
COPS2
PITRM1
MAN1B1
MVK
ZNF749
HSP90AA1
ZNF140
WDR20
PAXBP1
POLE4
KIFC1
RPS6
S100A13
PGM2L1
C2orf42
NAMPT
MATR3
COX5B
LCORL
CHTOP
CISD1
HOXC6
HOXC4
GOLGA3
ARL6IP1
ZSCAN32
ZNF174
FAM200B
TXNDC17
KIAA0753
ZNF134
FAM135A
GATAD2A
MESD
ASH2L
ABCA3
TASOR2
NIFK
ELOF1
DDX41
SIRT6
ANKRD24
ZCWPW2
AZI2
GINS3
KIF20A
BRD8
SMARCAL1
ZNFX1
TTC12
SHPK
CTNS
HNRNPD
PRRG2
NOSIP
ITSN1
CRYZL1
GMPS
EIF2S2
CMSS1
FBXL12
UNK
TOR1AIP1
GABPA
ATP5PF
MRPS15
PBLD
HNRNPH3
PTK6
SHBG
TEX22
FXR2
SRSF11
LRRC40
SETDB1
SMARCAD1
GFUS
ELP5
CTDNEP1
MCM3
SNAPIN
DNAJB1
DNAJC18
TECR
ZER1
SLC10A7
NDUFS3
KBTBD4
COG2
ANKRD39
RHEBL1
SACM1L
ERGIC3
N4BP2L1
KDM3A
MRPS23
SRRT
ERCC5
LPCAT3
FBXL18
MYPOP
MED23
ASNS
SMIM26
EBAG9
EIF3C
EIF3CL
CSNK1A1
CCS
CCDC87
DDOST
SENP2
LETM1
ELP6
SPATA24
C20orf96
ZNF846
IMPA2
CZIB
MICU2
DGAT1
MLF2
HDAC5
COX7A2L
ZNF574
FDXR
RAB8A
TCF25
TTLL4
MOB3A
IZUMO4
GOLGA7
NDUFA5
POU2F1
ANKRD54
NOP16
HIGD2A
DGUOK
TRMT1L
SWT1
COX7C
ZNF557
TNFAIP8L1
PCTP
CYRIB
STAM2
PTRHD1
CENPO
WDR59
TMEM141
CNOT4
ZNF606
NDUFA6
RAVER1
ZNF335
WDR75
POLR3B
SEC22C
NKTR
CCNL2
RTN3
ZNF776
METTL8
DCAF17
UFSP2
ZNF669
ABCC10
NOP56
TARS1
ASXL1
PRKAB1
C12orf73
ZNF436
TSEN2
KCNJ15
CCDC200
WDR74
YPEL3
BSDC1
SNX16
MTRNR2L2
MTRNR2L8
ITGB3BP
EFCAB7
DUSP6
ZNF562
PDE11A
RABGAP1
CBX1
FEM1C
RBBP5
RPS7
MTF2
SSBP1
STX16
DMAP1
SAMD4B